RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 NEURL1O76050 574 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 AKR7A3O95154 331 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 VAMP5O95183 116 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 WDPCPO95876 746 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 NR2C1P13056 603 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 ZNF182P17025 639 aaPredicted RBP6.32□□□□□ -1.4
SF3A3-206ENST00000487062 IL11P20809 199 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 PAX7P23759 505 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 PYCR1P32322 319 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 NAA10P41227 235 aaPredicted RBP6.32□□□□□ -1.4
SF3A3-206ENST00000487062 GBX2P52951 348 aaPredicted RBP6.32□□□□□ -1.4
SF3A3-206ENST00000487062 GPR85P60893 370 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 VBP1P61758 197 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 LCN6P62502 163 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 PLGLB1Q02325 96 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 POU3F1Q03052 451 aaPredicted RBP6.32□□□□□ -1.4
SF3A3-206ENST00000487062 MFAP5Q13361 173 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 AQP6Q13520 282 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 MELKQ14680 651 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 SPCS2Q15005 226 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 TRAM1Q15629 374 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 SSX1Q16384 188 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 PDSS1Q5T2R2 415 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 EEF1A1P5Q5VTE0 462 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 LIPKQ5VXJ0 399 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 SPINK14Q6IE38 97 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 SLC25A25Q6KCM7 469 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 ZNF322Q6U7Q0 402 aaPredicted RBP6.32□□□□□ -1.4
SF3A3-206ENST00000487062 PLEKHG7Q6ZR37 379 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 KCTD20Q7Z5Y7 419 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 ZBTB46Q86UZ6 589 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 ZNF227Q86WZ6 799 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 KLBQ86Z14 1044 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 PHC2Q8IXK0 858 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 PM20D2Q8IYS1 436 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 SYS1Q8N2H4 156 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 ZNF485Q8NCK3 441 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 FAM83FQ8NEG4 500 aaPredicted RBP6.32□□□□□ -1.4
SF3A3-206ENST00000487062 OR2M7Q8NG81 312 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 OR51L1Q8NGJ5 315 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 FNDC8Q8TC99 324 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 ZPLD1Q8TCW7 415 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 HAVCR2Q8TDQ0 301 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 SNX33Q8WV41 574 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 ASB10Q8WXI3 467 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 RPL3LQ92901 407 aaKnown RBP6.32□□□□□ -1.4
SF3A3-206ENST00000487062 KLHL15Q96M94 604 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 SFXN2Q96NB2 322 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 OXGR1Q96P68 337 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 SIGLEC12Q96PQ1 595 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 RBP7Q96R05 134 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 COQ7Q99807 217 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 CHCHD6Q9BRQ6 235 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 OR2B2Q9GZK3 357 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 OR51E2Q9H255 320 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 DCSTAMPQ9H295 470 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 SYT4Q9H2B2 425 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 RERGLQ9H628 205 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 TMEM185BQ9H7F4 350 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 EXOSC4Q9NPD3 245 aaKnown RBP6.32□□□□□ -1.4
SF3A3-206ENST00000487062 DEPPQ9NTK1 212 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 BABAM2Q9NXR7 383 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 B9D1Q9UPM9 204 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 RASD1Q9Y272 281 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 GSTK1Q9Y2Q3 226 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 TMEM14AQ9Y6G1 99 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 NCKAP5O14513 1909 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 FREM3P0C091 2139 aa6.32□□□□□ -1.4
SF3A3-206ENST00000487062 A0A0C4DFX4 3053 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 A0A0G2JMM0 328 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 A0A1W2PPB8 328 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 A0A1W2PRS3 328 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 SLC22A23A1A5C7 686 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 TRABD2BA6NFA1 517 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 LRRC3CA6NJW4 275 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 A6NL46 340 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 ZNF726A6NNF4 738 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 KIR3DP1A8MWS1 328 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 J3QLW9 94 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 NKX2-8O15522 239 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 SELENOFO60613 162 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 SLC16A7O60669 478 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 KHDRBS3O75525 346 aaKnown RBP6.31□□□□□ -1.4
SF3A3-206ENST00000487062 F10P00742 488 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 HLA-DQA2P01906 255 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 TFP02787 698 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 OPN1LWP04000 364 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 HLA-DPB1P04440 258 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 SP1P08047 785 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 TACSTD2P09758 323 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 PRKAR1AP10644 381 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 HLA-DOBP13765 273 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 IFNGR1P15260 489 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 ZNF19P17023 458 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 ZNF43P17038 809 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 CD53P19397 219 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 CELP19835 753 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 SHC1P29353 583 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 GABRA5P31644 462 aa6.31□□□□□ -1.4
SF3A3-206ENST00000487062 SOX6P35712 828 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms