RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 ZNF347Q96SE7 839 aa16.07■□□□□ 0.16
SMIM4-204ENST00000482728 SEPHS2Q99611 448 aa16.07■□□□□ 0.16
SMIM4-204ENST00000482728 THTPAQ9BU02 230 aa16.07■□□□□ 0.16
SMIM4-204ENST00000482728 IL1RAPQ9NPH3 570 aa16.07■□□□□ 0.16
SMIM4-204ENST00000482728 KRCC1Q9NPI7 259 aaPredicted RBP16.07■□□□□ 0.16
SMIM4-204ENST00000482728 CISD1Q9NZ45 108 aaKnown RBP16.07■□□□□ 0.16
SMIM4-204ENST00000482728 USF3Q68DE3 2245 aa16.07■□□□□ 0.16
SMIM4-204ENST00000482728 ITPR3Q14573 2671 aa16.07■□□□□ 0.16
SMIM4-204ENST00000482728 ARPC4-TTLL3A0A0A6YYG9 625 aa16.06■□□□□ 0.16
SMIM4-204ENST00000482728 GYG2O15488 501 aa16.06■□□□□ 0.16
SMIM4-204ENST00000482728 SMPD2O60906 423 aa16.06■□□□□ 0.16
SMIM4-204ENST00000482728 SEC14L2O76054 403 aa16.06■□□□□ 0.16
SMIM4-204ENST00000482728 GADD45GO95257 159 aa16.06■□□□□ 0.16
SMIM4-204ENST00000482728 TSPAN19P0C672 248 aa16.06■□□□□ 0.16
SMIM4-204ENST00000482728 GPR4P46093 362 aa16.06■□□□□ 0.16
SMIM4-204ENST00000482728 TUBA1BP68363 451 aa16.06■□□□□ 0.16
SMIM4-204ENST00000482728 TUBA4AP68366 448 aa16.06■□□□□ 0.16
SMIM4-204ENST00000482728 SPIBQ01892 262 aa16.06■□□□□ 0.16
SMIM4-204ENST00000482728 TAF11Q15544 211 aa16.06■□□□□ 0.16
SMIM4-204ENST00000482728 TESK1Q15569 626 aa16.06■□□□□ 0.16
SMIM4-204ENST00000482728 TUBA1AQ71U36 451 aa16.06■□□□□ 0.16
SMIM4-204ENST00000482728 SYT14Q8NB59 555 aa16.06■□□□□ 0.16
SMIM4-204ENST00000482728 LILRB1Q8NHL6 650 aaPredicted RBP16.06■□□□□ 0.16
SMIM4-204ENST00000482728 TMEM171Q8WVE6 324 aa16.06■□□□□ 0.16
SMIM4-204ENST00000482728 KCNS3Q9BQ31 491 aa16.06■□□□□ 0.16
SMIM4-204ENST00000482728 NDEL1Q9GZM8 345 aa16.06■□□□□ 0.16
SMIM4-204ENST00000482728 TXNIPQ9H3M7 391 aa16.06■□□□□ 0.16
SMIM4-204ENST00000482728 AURKCQ9UQB9 309 aa16.06■□□□□ 0.16
SMIM4-204ENST00000482728 F8P00451 2351 aa16.05■□□□□ 0.16
SMIM4-204ENST00000482728 TRAV27A0A087WT01 109 aa16.05■□□□□ 0.16
SMIM4-204ENST00000482728 TRBV4-1A0A0J9YWV2 114 aa16.05■□□□□ 0.16
SMIM4-204ENST00000482728 CENPBD1B2RD01 187 aa16.05■□□□□ 0.16
SMIM4-204ENST00000482728 SHISA9B4DS77 424 aa16.05■□□□□ 0.16
SMIM4-204ENST00000482728 SEMG1P04279 462 aa16.05■□□□□ 0.16
SMIM4-204ENST00000482728 QDPRP09417 244 aa16.05■□□□□ 0.16
SMIM4-204ENST00000482728 PGA4P0DJD7 388 aa16.05■□□□□ 0.16
SMIM4-204ENST00000482728 PGA3P0DJD8 388 aa16.05■□□□□ 0.16
SMIM4-204ENST00000482728 ACADSP16219 412 aa16.05■□□□□ 0.16
SMIM4-204ENST00000482728 ATP6V1B2P21281 511 aa16.05■□□□□ 0.16
SMIM4-204ENST00000482728 RPL4P36578 427 aaKnown RBP16.05■□□□□ 0.16
SMIM4-204ENST00000482728 CDH11P55287 796 aa16.05■□□□□ 0.16
SMIM4-204ENST00000482728 CTXN1P60606 82 aa16.05■□□□□ 0.16
SMIM4-204ENST00000482728 IQCCQ4KMZ1 466 aa16.05■□□□□ 0.16
SMIM4-204ENST00000482728 LRFN4Q6PJG9 635 aa16.05■□□□□ 0.16
SMIM4-204ENST00000482728 ZDHHC21Q8IVQ6 265 aa16.05■□□□□ 0.16
SMIM4-204ENST00000482728 OR4K5Q8NGD3 323 aa16.05■□□□□ 0.16
SMIM4-204ENST00000482728 OR13C2Q8NGS9 318 aa16.05■□□□□ 0.16
SMIM4-204ENST00000482728 SMAP2Q8WU79 429 aaPredicted RBP16.05■□□□□ 0.16
SMIM4-204ENST00000482728 ASB10Q8WXI3 467 aa16.05■□□□□ 0.16
SMIM4-204ENST00000482728 POP5Q969H6 163 aaKnown RBP16.05■□□□□ 0.16
SMIM4-204ENST00000482728 CCDC124Q96CT7 223 aaKnown RBP16.05■□□□□ 0.16
SMIM4-204ENST00000482728 FAM46AQ96IP4 442 aaKnown RBP16.05■□□□□ 0.16
SMIM4-204ENST00000482728 LRGUKQ96M69 825 aa16.05■□□□□ 0.16
SMIM4-204ENST00000482728 NELFAQ9H3P2 528 aa16.05■□□□□ 0.16
SMIM4-204ENST00000482728 FAIMQ9NVQ4 179 aa16.05■□□□□ 0.16
SMIM4-204ENST00000482728 TMCC3Q9ULS5 477 aa16.05■□□□□ 0.16
SMIM4-204ENST00000482728 NPIPB13A6NJU9 1138 aa16.04■□□□□ 0.16
SMIM4-204ENST00000482728 NPIPB4C9JG80 1138 aa16.04■□□□□ 0.16
SMIM4-204ENST00000482728 DHHO43323 396 aa16.04■□□□□ 0.16
SMIM4-204ENST00000482728 ENTPD5O75356 428 aa16.04■□□□□ 0.16
SMIM4-204ENST00000482728 CBR1P16152 277 aa16.04■□□□□ 0.16
SMIM4-204ENST00000482728 RPS4XP62701 263 aaKnown RBP16.04■□□□□ 0.16
SMIM4-204ENST00000482728 MS4A2Q01362 244 aa16.04■□□□□ 0.16
SMIM4-204ENST00000482728 TOP3AQ13472 1001 aaPredicted RBP16.04■□□□□ 0.16
SMIM4-204ENST00000482728 ZBED5Q49AG3 693 aa16.04■□□□□ 0.16
SMIM4-204ENST00000482728 DNAL1Q4LDG9 190 aa16.04■□□□□ 0.16
SMIM4-204ENST00000482728 ARMC4Q5T2S8 1044 aa16.04■□□□□ 0.16
SMIM4-204ENST00000482728 LCN8Q6JVE9 175 aa16.04■□□□□ 0.16
SMIM4-204ENST00000482728 SPNS3Q6ZMD2 512 aa16.04■□□□□ 0.16
SMIM4-204ENST00000482728 PIWIL3Q7Z3Z3 882 aaKnown RBP16.04■□□□□ 0.16
SMIM4-204ENST00000482728 FAM169BQ8N8A8 192 aa16.04■□□□□ 0.16
SMIM4-204ENST00000482728 CLPTM1LQ96KA5 538 aa16.04■□□□□ 0.16
SMIM4-204ENST00000482728 DHRS1Q96LJ7 313 aa16.04■□□□□ 0.16
SMIM4-204ENST00000482728 SLC38A2Q96QD8 506 aa16.04■□□□□ 0.16
SMIM4-204ENST00000482728 FOXB1Q99853 325 aa16.04■□□□□ 0.16
SMIM4-204ENST00000482728 CXXC4Q9H2H0 198 aa16.04■□□□□ 0.16
SMIM4-204ENST00000482728 CXorf56Q9H5V9 222 aa16.04■□□□□ 0.16
SMIM4-204ENST00000482728 LAMP3Q9UQV4 416 aa16.04■□□□□ 0.16
SMIM4-204ENST00000482728 ATP23Q9Y6H3 246 aa16.04■□□□□ 0.16
SMIM4-204ENST00000482728 SH3PXD2BA1X283 911 aa16.03■□□□□ 0.16
SMIM4-204ENST00000482728 CDC42EP2O14613 210 aa16.03■□□□□ 0.16
SMIM4-204ENST00000482728 ARHGEF9O43307 516 aa16.03■□□□□ 0.16
SMIM4-204ENST00000482728 TRMUO75648 421 aaKnown RBP16.03■□□□□ 0.16
SMIM4-204ENST00000482728 KRT36O76013 467 aa16.03■□□□□ 0.16
SMIM4-204ENST00000482728 CRYAAP02489 173 aa16.03■□□□□ 0.16
SMIM4-204ENST00000482728 CD79AP11912 226 aa16.03■□□□□ 0.16
SMIM4-204ENST00000482728 NR2C1P13056 603 aa16.03■□□□□ 0.16
SMIM4-204ENST00000482728 B4GALT1P15291 398 aa16.03■□□□□ 0.16
SMIM4-204ENST00000482728 ARR3P36575 388 aa16.03■□□□□ 0.16
SMIM4-204ENST00000482728 IFNGR2P38484 337 aa16.03■□□□□ 0.16
SMIM4-204ENST00000482728 ZNF84P51523 738 aa16.03■□□□□ 0.16
SMIM4-204ENST00000482728 RPL27P61353 136 aaKnown RBP16.03■□□□□ 0.16
SMIM4-204ENST00000482728 CHRNB3Q05901 458 aa16.03■□□□□ 0.16
SMIM4-204ENST00000482728 RUNX1T1Q06455 604 aa16.03■□□□□ 0.16
SMIM4-204ENST00000482728 SPOCK1Q08629 439 aa16.03■□□□□ 0.16
SMIM4-204ENST00000482728 SEC23BQ15437 767 aa16.03■□□□□ 0.16
SMIM4-204ENST00000482728 FAM98BQ52LJ0 330 aaKnown RBP16.03■□□□□ 0.16
SMIM4-204ENST00000482728 ZNF627Q7L945 461 aa16.03■□□□□ 0.16
SMIM4-204ENST00000482728 IGFN1Q86VF2 1251 aa16.03■□□□□ 0.16
SMIM4-204ENST00000482728 NANOS1Q8WY41 292 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms