RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 EIF4E2O60573 245 aaKnown RBP12.72□□□□□ -0.37
UBXN11-214ENST00000475591 RAD1O60671 282 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 HLA-DQA2P01906 255 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 YES1P07947 543 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 DPP4P27487 766 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 P2RX1P51575 399 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 FBXW4P57775 412 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 UBE2NLQ5JXB2 153 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 LRRN1Q6UXK5 716 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 STAC2Q6ZMT1 411 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 PRSS35Q8N3Z0 413 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 CPED1A4D0V7 1026 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 FAM172BPA6NC97 362 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 H0YC42 278 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 AIPO00170 330 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 WNT11O96014 354 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 TACSTD2P09758 323 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 HLA-DOBP13765 273 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 RNF4P78317 190 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 PLA2G7Q13093 441 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 MEP1BQ16820 701 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 COL28A1Q2UY09 1125 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 Q499Y3 187 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 GPR139Q6DWJ6 353 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 GUSBP11Q6P575 273 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 WDR74Q6RFH5 385 aaPredicted RBP12.72□□□□□ -0.37
UBXN11-214ENST00000475591 LINGO2Q7L985 606 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 MAMDC2Q7Z304 686 aaPredicted RBP12.72□□□□□ -0.37
UBXN11-214ENST00000475591 TCTE3Q8IZS6 198 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 CARFQ8N187 725 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 ASCC1Q8N9N2 400 aaKnown RBP12.72□□□□□ -0.37
UBXN11-214ENST00000475591 NSMAFQ92636 917 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 PPP1R14AQ96A00 147 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 KLHL15Q96M94 604 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 MFRPQ9BY79 579 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 WNT16Q9UBV4 365 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 CAMK2AQ9UQM7 478 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 HRH3Q9Y5N1 445 aa12.72□□□□□ -0.37
UBXN11-214ENST00000475591 XKRYO14609 159 aa12.71□□□□□ -0.37
UBXN11-214ENST00000475591 SYPP08247 313 aa12.71□□□□□ -0.37
UBXN11-214ENST00000475591 POLR2HP52434 150 aaKnown RBP12.71□□□□□ -0.37
UBXN11-214ENST00000475591 INSM1Q01101 510 aaPredicted RBP12.71□□□□□ -0.37
UBXN11-214ENST00000475591 C1orf140Q5VVS0 124 aa12.71□□□□□ -0.37
UBXN11-214ENST00000475591 BICRALQ6AI39 1079 aa12.71□□□□□ -0.37
UBXN11-214ENST00000475591 WDFY1Q8IWB7 410 aa12.71□□□□□ -0.37
UBXN11-214ENST00000475591 APCDD1LQ8NCL9 501 aa12.71□□□□□ -0.37
UBXN11-214ENST00000475591 OR2G2Q8NGZ5 317 aa12.71□□□□□ -0.37
UBXN11-214ENST00000475591 ZNF417Q8TAU3 575 aa12.71□□□□□ -0.37
UBXN11-214ENST00000475591 AKAP1Q92667 903 aaKnown RBP eCLIP12.71□□□□□ -0.37
UBXN11-214ENST00000475591 ZNF587Q96SQ5 575 aaPredicted RBP12.71□□□□□ -0.37
UBXN11-214ENST00000475591 NKX3-1Q99801 234 aaPredicted RBP12.71□□□□□ -0.37
UBXN11-214ENST00000475591 TAS2R10Q9NYW0 307 aa12.71□□□□□ -0.37
UBXN11-214ENST00000475591 OR5V1Q9UGF6 321 aa12.71□□□□□ -0.37
UBXN11-214ENST00000475591 V9GY05 133 aa12.71□□□□□ -0.37
UBXN11-214ENST00000475591 CACNA1CQ13936 2221 aa12.71□□□□□ -0.37
UBXN11-214ENST00000475591 OR4C45A6NMZ5 311 aa12.71□□□□□ -0.37
UBXN11-214ENST00000475591 SLC16A7O60669 478 aa12.71□□□□□ -0.37
UBXN11-214ENST00000475591 NPIPB7O75200 414 aa12.71□□□□□ -0.37
UBXN11-214ENST00000475591 ITGA10O75578 1167 aa12.71□□□□□ -0.37
UBXN11-214ENST00000475591 MAS1P04201 325 aa12.71□□□□□ -0.37
UBXN11-214ENST00000475591 TCRBP04435 133 aa12.71□□□□□ -0.37
UBXN11-214ENST00000475591 CXCL12P48061 93 aa12.71□□□□□ -0.37
UBXN11-214ENST00000475591 FCN2Q15485 313 aa12.71□□□□□ -0.37
UBXN11-214ENST00000475591 SGCBQ16585 318 aa12.71□□□□□ -0.37
UBXN11-214ENST00000475591 FAM69AQ5T7M9 428 aa12.71□□□□□ -0.37
UBXN11-214ENST00000475591 HLA-CQ95604 372 aa12.71□□□□□ -0.37
UBXN11-214ENST00000475591 SHDQ96IW2 340 aa12.71□□□□□ -0.37
UBXN11-214ENST00000475591 OR6C1Q96RD1 312 aa12.71□□□□□ -0.37
UBXN11-214ENST00000475591 TCF7L1Q9HCS4 588 aa12.71□□□□□ -0.37
UBXN11-214ENST00000475591 B9D1Q9UPM9 204 aa12.71□□□□□ -0.37
UBXN11-214ENST00000475591 PRSS37A4D1T9 235 aa12.7□□□□□ -0.38
UBXN11-214ENST00000475591 TRABD2BA6NFA1 517 aa12.7□□□□□ -0.38
UBXN11-214ENST00000475591 SHISA8B8ZZ34 492 aa12.7□□□□□ -0.38
UBXN11-214ENST00000475591 ZNF593O00488 134 aaPredicted RBP12.7□□□□□ -0.38
UBXN11-214ENST00000475591 TMIGD3P0DMS9 266 aaPredicted RBP12.7□□□□□ -0.38
UBXN11-214ENST00000475591 CTLA4P16410 223 aa12.7□□□□□ -0.38
UBXN11-214ENST00000475591 GDNFP39905 211 aa12.7□□□□□ -0.38
UBXN11-214ENST00000475591 KIR3DL2P43630 455 aa12.7□□□□□ -0.38
UBXN11-214ENST00000475591 RPL27P61353 136 aaKnown RBP12.7□□□□□ -0.38
UBXN11-214ENST00000475591 PITPNAQ00169 270 aa12.7□□□□□ -0.38
UBXN11-214ENST00000475591 MRPL28Q13084 256 aaKnown RBP12.7□□□□□ -0.38
UBXN11-214ENST00000475591 TMEM255AQ5JRV8 349 aa12.7□□□□□ -0.38
UBXN11-214ENST00000475591 FAM69BQ5VUD6 431 aa12.7□□□□□ -0.38
UBXN11-214ENST00000475591 MDGA2Q7Z553 956 aa12.7□□□□□ -0.38
UBXN11-214ENST00000475591 KCTD20Q7Z5Y7 419 aa12.7□□□□□ -0.38
UBXN11-214ENST00000475591 ZNF676Q8N7Q3 588 aa12.7□□□□□ -0.38
UBXN11-214ENST00000475591 PLPP5Q8NEB5 264 aa12.7□□□□□ -0.38
UBXN11-214ENST00000475591 ZNF519Q8TB69 540 aa12.7□□□□□ -0.38
UBXN11-214ENST00000475591 MS4A3Q96HJ5 214 aa12.7□□□□□ -0.38
UBXN11-214ENST00000475591 DPAGT1Q9H3H5 408 aa12.7□□□□□ -0.38
UBXN11-214ENST00000475591 BEX1Q9HBH7 125 aa12.7□□□□□ -0.38
UBXN11-214ENST00000475591 MRPL22Q9NWU5 206 aaKnown RBP12.7□□□□□ -0.38
UBXN11-214ENST00000475591 WDFY4Q6ZS81 3184 aa12.7□□□□□ -0.38
UBXN11-214ENST00000475591 TRBV5-5A0A0J9YX44 114 aa12.7□□□□□ -0.38
UBXN11-214ENST00000475591 PDCD5O14737 125 aa12.7□□□□□ -0.38
UBXN11-214ENST00000475591 MPZL1O95297 269 aa12.7□□□□□ -0.38
UBXN11-214ENST00000475591 LCN1P31025 176 aa12.7□□□□□ -0.38
UBXN11-214ENST00000475591 SNRPD2P62316 118 aaKnown RBP12.7□□□□□ -0.38
UBXN11-214ENST00000475591 FAPQ12884 760 aa12.7□□□□□ -0.38
UBXN11-214ENST00000475591 KLF9Q13886 244 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms