RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 RCE1Q9Y256 329 aa23.51■■□□□ 1.35
TMEM248-205ENST00000433271 CD8B2A6NJW9 211 aa23.51■■□□□ 1.35
TMEM248-205ENST00000433271 SNTNA6NMZ2 147 aa23.51■■□□□ 1.35
TMEM248-205ENST00000433271 H7C1C5 153 aa23.51■■□□□ 1.35
TMEM248-205ENST00000433271 PRODHO43272 600 aa23.51■■□□□ 1.35
TMEM248-205ENST00000433271 ZNF432O94892 652 aa23.51■■□□□ 1.35
TMEM248-205ENST00000433271 IGHG1P01857 330 aa23.51■■□□□ 1.35
TMEM248-205ENST00000433271 LCN6P62502 163 aa23.51■■□□□ 1.35
TMEM248-205ENST00000433271 NSUN5P2Q63ZY6 315 aa23.51■■□□□ 1.35
TMEM248-205ENST00000433271 BBS1Q8NFJ9 593 aa23.51■■□□□ 1.35
TMEM248-205ENST00000433271 ZNF566Q969W8 418 aa23.51■■□□□ 1.35
TMEM248-205ENST00000433271 TMEM45BQ96B21 275 aa23.51■■□□□ 1.35
TMEM248-205ENST00000433271 SYT4Q9H2B2 425 aa23.51■■□□□ 1.35
TMEM248-205ENST00000433271 SLC22A23A1A5C7 686 aa23.5■■□□□ 1.35
TMEM248-205ENST00000433271 CENPBD1B2RD01 187 aa23.5■■□□□ 1.35
TMEM248-205ENST00000433271 YES1P07947 543 aa23.5■■□□□ 1.35
TMEM248-205ENST00000433271 HOXD4P09016 255 aaPredicted RBP23.5■■□□□ 1.35
TMEM248-205ENST00000433271 NFATC3Q12968 1075 aa23.5■■□□□ 1.35
TMEM248-205ENST00000433271 CAMK2DQ13557 499 aa23.5■■□□□ 1.35
TMEM248-205ENST00000433271 RBM48Q5RL73 367 aaKnown RBP23.5■■□□□ 1.35
TMEM248-205ENST00000433271 CD163Q86VB7 1156 aa23.5■■□□□ 1.35
TMEM248-205ENST00000433271 GID4Q8IVV7 300 aa23.5■■□□□ 1.35
TMEM248-205ENST00000433271 TUSC5Q8IXB3 177 aa23.5■■□□□ 1.35
TMEM248-205ENST00000433271 SYT14Q8NB59 555 aa23.5■■□□□ 1.35
TMEM248-205ENST00000433271 BPIFB6Q8NFQ5 453 aa23.5■■□□□ 1.35
TMEM248-205ENST00000433271 CPT1CQ8TCG5 803 aa23.5■■□□□ 1.35
TMEM248-205ENST00000433271 OR2M2Q96R28 347 aa23.5■■□□□ 1.35
TMEM248-205ENST00000433271 ALG12Q9BV10 488 aa23.5■■□□□ 1.35
TMEM248-205ENST00000433271 RPRD1BQ9NQG5 326 aaKnown RBP23.5■■□□□ 1.35
TMEM248-205ENST00000433271 GLRX2Q9NS18 164 aa23.5■■□□□ 1.35
TMEM248-205ENST00000433271 PLCXD1Q9NUJ7 323 aa23.5■■□□□ 1.35
TMEM248-205ENST00000433271 ZNF835Q9Y2P0 537 aa23.5■■□□□ 1.35
TMEM248-205ENST00000433271 SLC1A7O00341 560 aa23.49■■□□□ 1.35
TMEM248-205ENST00000433271 CCDC159P0C7I6 412 aa23.49■■□□□ 1.35
TMEM248-205ENST00000433271 PGA4P0DJD7 388 aa23.49■■□□□ 1.35
TMEM248-205ENST00000433271 PGA3P0DJD8 388 aa23.49■■□□□ 1.35
TMEM248-205ENST00000433271 RBPJQ06330 500 aa23.49■■□□□ 1.35
TMEM248-205ENST00000433271 NIPAL3Q6P499 406 aa23.49■■□□□ 1.35
TMEM248-205ENST00000433271 OR9Q1Q8NGQ5 310 aa23.49■■□□□ 1.35
TMEM248-205ENST00000433271 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP23.49■■□□□ 1.35
TMEM248-205ENST00000433271 MYRFQ9Y2G1 1151 aa23.49■■□□□ 1.35
TMEM248-205ENST00000433271 PRRG2O14669 202 aa23.48■■□□□ 1.35
TMEM248-205ENST00000433271 NTF4P34130 210 aa23.48■■□□□ 1.35
TMEM248-205ENST00000433271 NUDT6P53370 316 aa23.48■■□□□ 1.35
TMEM248-205ENST00000433271 CLRN1P58418 232 aa23.48■■□□□ 1.35
TMEM248-205ENST00000433271 RPTNQ6XPR3 784 aa23.48■■□□□ 1.35
TMEM248-205ENST00000433271 AAED1Q7RTV5 226 aa23.48■■□□□ 1.35
TMEM248-205ENST00000433271 TMEM123Q8N131 208 aa23.48■■□□□ 1.35
TMEM248-205ENST00000433271 OR2T4Q8NH00 348 aa23.48■■□□□ 1.35
TMEM248-205ENST00000433271 GMPPAQ96IJ6 420 aaPredicted RBP23.48■■□□□ 1.35
TMEM248-205ENST00000433271 OR51V1Q9H2C8 321 aa23.48■■□□□ 1.35
TMEM248-205ENST00000433271 AMBNQ9NP70 447 aa23.48■■□□□ 1.35
TMEM248-205ENST00000433271 PARPBPQ9NWS1 579 aa23.48■■□□□ 1.35
TMEM248-205ENST00000433271 ASB6Q9NWX5 421 aa23.48■■□□□ 1.35
TMEM248-205ENST00000433271 NOSIPQ9Y314 301 aaKnown RBP23.48■■□□□ 1.35
TMEM248-205ENST00000433271 ATXN7O15265 892 aaPredicted RBP23.48■■□□□ 1.35
TMEM248-205ENST00000433271 XPNPEP2O43895 674 aa23.48■■□□□ 1.35
TMEM248-205ENST00000433271 SLC19A2O60779 497 aa23.48■■□□□ 1.35
TMEM248-205ENST00000433271 SMNDC1O75940 238 aaKnown RBP eCLIP23.48■■□□□ 1.35
TMEM248-205ENST00000433271 CLUP10909 449 aa23.48■■□□□ 1.35
TMEM248-205ENST00000433271 SPI1P17947 270 aa23.48■■□□□ 1.35
TMEM248-205ENST00000433271 SLC2A5P22732 501 aa23.48■■□□□ 1.35
TMEM248-205ENST00000433271 HTR1FP30939 366 aa23.48■■□□□ 1.35
TMEM248-205ENST00000433271 SELENOPP49908 381 aa23.48■■□□□ 1.35
TMEM248-205ENST00000433271 CDH11P55287 796 aa23.48■■□□□ 1.35
TMEM248-205ENST00000433271 HIST3H3Q16695 136 aa23.48■■□□□ 1.35
TMEM248-205ENST00000433271 IGSF10Q6WRI0 2623 aa23.48■■□□□ 1.35
TMEM248-205ENST00000433271 MEPCEQ7L2J0 689 aaKnown RBP23.48■■□□□ 1.35
TMEM248-205ENST00000433271 OR6V1Q8N148 313 aa23.48■■□□□ 1.35
TMEM248-205ENST00000433271 NOXO1Q8NFA2 376 aa23.48■■□□□ 1.35
TMEM248-205ENST00000433271 FNDC8Q8TC99 324 aa23.48■■□□□ 1.35
TMEM248-205ENST00000433271 RBP7Q96R05 134 aa23.48■■□□□ 1.35
TMEM248-205ENST00000433271 TM9SF2Q99805 663 aa23.48■■□□□ 1.35
TMEM248-205ENST00000433271 NUAK2Q9H093 628 aa23.48■■□□□ 1.35
TMEM248-205ENST00000433271 SCN3BQ9NY72 215 aa23.48■■□□□ 1.35
TMEM248-205ENST00000433271 CLEC4AQ9UMR7 237 aa23.48■■□□□ 1.35
TMEM248-205ENST00000433271 RPL36Q9Y3U8 105 aaKnown RBP23.48■■□□□ 1.35
TMEM248-205ENST00000433271 CRHBPP24387 322 aa23.47■■□□□ 1.35
TMEM248-205ENST00000433271 LGALS3BPQ08380 585 aa23.47■■□□□ 1.35
TMEM248-205ENST00000433271 APOFQ13790 326 aa23.47■■□□□ 1.35
TMEM248-205ENST00000433271 KLHL12Q53G59 568 aa23.47■■□□□ 1.35
TMEM248-205ENST00000433271 THEM4Q5T1C6 240 aa23.47■■□□□ 1.35
TMEM248-205ENST00000433271 C1orf185Q5T7R7 199 aa23.47■■□□□ 1.35
TMEM248-205ENST00000433271 CARD17Q5XLA6 110 aa23.47■■□□□ 1.35
TMEM248-205ENST00000433271 RTL6Q6ICC9 239 aa23.47■■□□□ 1.35
TMEM248-205ENST00000433271 OR2A2Q6IF42 318 aa23.47■■□□□ 1.35
TMEM248-205ENST00000433271 INTS12Q96CB8 462 aaKnown RBP23.47■■□□□ 1.35
TMEM248-205ENST00000433271 TSSK2Q96PF2 358 aa23.47■■□□□ 1.35
TMEM248-205ENST00000433271 SRA1Q9HD15 236 aaKnown RBP23.47■■□□□ 1.35
TMEM248-205ENST00000433271 BLOC1S6Q9UL45 172 aa23.47■■□□□ 1.35
TMEM248-205ENST00000433271 FKBP7Q9Y680 259 aa23.47■■□□□ 1.35
TMEM248-205ENST00000433271 RP1L1Q8IWN7 2480 aaPredicted RBP23.46■■□□□ 1.35
TMEM248-205ENST00000433271 SLC22A31A6NKX4 558 aa23.46■■□□□ 1.35
TMEM248-205ENST00000433271 MRPL33O75394 65 aaKnown RBP23.46■■□□□ 1.35
TMEM248-205ENST00000433271 TNFAIP8O95379 198 aa23.46■■□□□ 1.35
TMEM248-205ENST00000433271 GYPBP06028 91 aa23.46■■□□□ 1.35
TMEM248-205ENST00000433271 NR2C1P13056 603 aa23.46■■□□□ 1.35
TMEM248-205ENST00000433271 CRABP1P29762 137 aa23.46■■□□□ 1.35
TMEM248-205ENST00000433271 DBPQ10586 325 aaPredicted RBP23.46■■□□□ 1.35
TMEM248-205ENST00000433271 TMED1Q13445 227 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms