RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 CD47Q08722 323 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 TSPO2Q5TGU0 170 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 OTPQ5XKR4 325 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 TMEM211Q6ICI0 200 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 RPL13AP3Q6NVV1 102 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 LINGO2Q7L985 606 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 ZNF610Q8N9Z0 462 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 RELL2Q8NC24 303 aaPredicted RBP12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 UBE2FQ969M7 185 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 APH1AQ96BI3 265 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 ZNF837Q96EG3 531 aaPredicted RBP12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 TSSK2Q96PF2 358 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 NDEL1Q9GZM8 345 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 MED20Q9H944 212 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 GLRX2Q9NS18 164 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 SLC7A10Q9NS82 523 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 IGKV1D-43A0A0B4J1Z2 117 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 A0A1B0GUH1 482 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 ZAR1LA6NP61 321 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 HSPB2A8KAH6 182 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 SEC14L2O76054 403 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 IGHMP01871 453 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 PLA2G2AP14555 144 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 TSC22D1Q15714 1073 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 HSPB2Q16082 182 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 C6orf52Q5T4I8 152 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 LEG1Q6P5S2 330 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 TFAP2EQ6VUC0 442 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 BCDIN3DQ7Z5W3 292 aaKnown RBP12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 JAZF1Q86VZ6 243 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 TMEM123Q8N131 208 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 LNX2Q8N448 690 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 ARIH2OSQ8N7S6 290 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 OR6N1Q8NGY5 312 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 NSMAFQ92636 917 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 ZNF566Q969W8 418 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 TMEM45BQ96B21 275 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 FAM118AQ9NWS6 357 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 PROCRQ9UNN8 238 aa12.47□□□□□ -0.41
CHRNA1-204ENST00000409323 NKX2-6A6NCS4 301 aa12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 FAM171A2A8MVW0 826 aa12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 XKRYO14609 159 aa12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 PRKYO43930 277 aa12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 SLC43A1O75387 559 aa12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 KRT33AO76009 404 aa12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 CGAP01215 116 aa12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 GYPBP06028 91 aa12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 RNF224P0DH78 156 aa12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 PGA4P0DJD7 388 aa12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 PGA3P0DJD8 388 aa12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 CLUP10909 449 aa12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 SMSP52788 366 aa12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 FAPQ12884 760 aa12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 CRMP1Q14194 572 aa12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 ETFDHQ16134 617 aa12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 ZNF362Q5T0B9 420 aaPredicted RBP12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 NOXO1Q8NFA2 376 aa12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 OR9Q1Q8NGQ5 310 aa12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 OR6K3Q8NGY3 331 aa12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 OR6X1Q8NH79 312 aa12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 FAM81AQ8TBF8 368 aa12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 TFAP2CQ92754 450 aa12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 SLC25A44Q96H78 314 aaPredicted RBP12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 NR1H4Q96RI1 486 aaPredicted RBP12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 IL4I1Q96RQ9 567 aa12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 SFXN3Q9BWM7 321 aa12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 HCAR1Q9BXC0 346 aa12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 GRIP2Q9C0E4 1043 aa12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 SYT4Q9H2B2 425 aa12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 SLCO5A1Q9H2Y9 848 aa12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 RPRD1BQ9NQG5 326 aaKnown RBP12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 SLC5A6Q9Y289 635 aa12.46□□□□□ -0.42
CHRNA1-204ENST00000409323 OR6C68A6NDL8 312 aa12.45□□□□□ -0.42
CHRNA1-204ENST00000409323 SURF4O15260 269 aa12.45□□□□□ -0.42
CHRNA1-204ENST00000409323 GPANK1O95872 356 aa12.45□□□□□ -0.42
CHRNA1-204ENST00000409323 IGHG1P01857 330 aa12.45□□□□□ -0.42
CHRNA1-204ENST00000409323 GNAO1P09471 354 aa12.45□□□□□ -0.42
CHRNA1-204ENST00000409323 OR3A2P47893 321 aa12.45□□□□□ -0.42
CHRNA1-204ENST00000409323 CSNK1A1P48729 337 aa12.45□□□□□ -0.42
CHRNA1-204ENST00000409323 SNAPC1Q16533 368 aa12.45□□□□□ -0.42
CHRNA1-204ENST00000409323 SLX4IPQ5VYV7 408 aa12.45□□□□□ -0.42
CHRNA1-204ENST00000409323 GPR137CQ8N3F9 429 aa12.45□□□□□ -0.42
CHRNA1-204ENST00000409323 SLC37A3Q8NCC5 494 aa12.45□□□□□ -0.42
CHRNA1-204ENST00000409323 OR51L1Q8NGJ5 315 aa12.45□□□□□ -0.42
CHRNA1-204ENST00000409323 ZFP3Q96NJ6 502 aa12.45□□□□□ -0.42
CHRNA1-204ENST00000409323 RDH12Q96NR8 316 aa12.45□□□□□ -0.42
CHRNA1-204ENST00000409323 KCNK17Q96T54 332 aa12.45□□□□□ -0.42
CHRNA1-204ENST00000409323 SLC25A19Q9HC21 320 aa12.45□□□□□ -0.42
CHRNA1-204ENST00000409323 GP6Q9HCN6 339 aa12.45□□□□□ -0.42
CHRNA1-204ENST00000409323 SRA1Q9HD15 236 aaKnown RBP12.45□□□□□ -0.42
CHRNA1-204ENST00000409323 UPB1Q9UBR1 384 aa12.45□□□□□ -0.42
CHRNA1-204ENST00000409323 RCE1Q9Y256 329 aa12.45□□□□□ -0.42
CHRNA1-204ENST00000409323 GMPPBQ9Y5P6 360 aa12.45□□□□□ -0.42
CHRNA1-204ENST00000409323 LOC100130705A0A1B0GUX0 176 aa12.44□□□□□ -0.42
CHRNA1-204ENST00000409323 PRSS37A4D1T9 235 aa12.44□□□□□ -0.42
CHRNA1-204ENST00000409323 DCTN6O00399 190 aa12.44□□□□□ -0.42
CHRNA1-204ENST00000409323 DVL2O14641 736 aa12.44□□□□□ -0.42
CHRNA1-204ENST00000409323 ARPC3O15145 178 aa12.44□□□□□ -0.42
CHRNA1-204ENST00000409323 AKAP8O43823 692 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms