RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 KIF17Q9P2E2 1029 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 NDRG3Q9UGV2 375 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 RCE1Q9Y256 329 aa11.62□□□□□ -0.55
TUBD1-202ENST00000340993 SPG11Q96JI7 2443 aa11.61□□□□□ -0.55
TUBD1-202ENST00000340993 NOTCH2Q04721 2471 aa11.61□□□□□ -0.55
TUBD1-202ENST00000340993 KLF4O43474 513 aa11.61□□□□□ -0.55
TUBD1-202ENST00000340993 NDUFB2O95178 105 aa11.61□□□□□ -0.55
TUBD1-202ENST00000340993 THBDP07204 575 aa11.61□□□□□ -0.55
TUBD1-202ENST00000340993 B4GALT1P15291 398 aa11.61□□□□□ -0.55
TUBD1-202ENST00000340993 ZNF23P17027 643 aa11.61□□□□□ -0.55
TUBD1-202ENST00000340993 POU1F1P28069 291 aa11.61□□□□□ -0.55
TUBD1-202ENST00000340993 GSSP48637 474 aa11.61□□□□□ -0.55
TUBD1-202ENST00000340993 DAP3P51398 398 aaKnown RBP11.61□□□□□ -0.55
TUBD1-202ENST00000340993 ARF1P84077 181 aaKnown RBP11.61□□□□□ -0.55
TUBD1-202ENST00000340993 TAB1Q15750 504 aa11.61□□□□□ -0.55
TUBD1-202ENST00000340993 ZNF770Q6IQ21 691 aaPredicted RBP11.61□□□□□ -0.55
TUBD1-202ENST00000340993 KLHL24Q6TFL4 600 aa11.61□□□□□ -0.55
TUBD1-202ENST00000340993 NHLRC1Q6VVB1 395 aa11.61□□□□□ -0.55
TUBD1-202ENST00000340993 C20orf196Q8IYI0 205 aa11.61□□□□□ -0.55
TUBD1-202ENST00000340993 POMGNT2Q8NAT1 580 aa11.61□□□□□ -0.55
TUBD1-202ENST00000340993 LIPHQ8WWY8 451 aa11.61□□□□□ -0.55
TUBD1-202ENST00000340993 ZNF570Q96NI8 536 aa11.61□□□□□ -0.55
TUBD1-202ENST00000340993 TXNIPQ9H3M7 391 aa11.61□□□□□ -0.55
TUBD1-202ENST00000340993 TBC1D23Q9NUY8 699 aa11.61□□□□□ -0.55
TUBD1-202ENST00000340993 ARMC1Q9NVT9 282 aa11.61□□□□□ -0.55
TUBD1-202ENST00000340993 GRHPRQ9UBQ7 328 aa11.61□□□□□ -0.55
TUBD1-202ENST00000340993 DNAJB9Q9UBS3 223 aa11.61□□□□□ -0.55
TUBD1-202ENST00000340993 IGKV1D-43A0A0B4J1Z2 117 aa11.6□□□□□ -0.55
TUBD1-202ENST00000340993 CASKO14936 926 aa11.6□□□□□ -0.55
TUBD1-202ENST00000340993 DEAF1O75398 565 aaPredicted RBP11.6□□□□□ -0.55
TUBD1-202ENST00000340993 IGF2P01344 180 aa11.6□□□□□ -0.55
TUBD1-202ENST00000340993 IGHG1P01857 330 aa11.6□□□□□ -0.55
TUBD1-202ENST00000340993 QDPRP09417 244 aa11.6□□□□□ -0.55
TUBD1-202ENST00000340993 PSMB1P20618 241 aaKnown RBP11.6□□□□□ -0.55
TUBD1-202ENST00000340993 COX5AP20674 150 aa11.6□□□□□ -0.55
TUBD1-202ENST00000340993 FPR3P25089 353 aa11.6□□□□□ -0.55
TUBD1-202ENST00000340993 FASP25445 335 aa11.6□□□□□ -0.55
TUBD1-202ENST00000340993 MPGP29372 298 aa11.6□□□□□ -0.55
TUBD1-202ENST00000340993 CDAP32320 146 aa11.6□□□□□ -0.55
TUBD1-202ENST00000340993 ZNF83P51522 516 aa11.6□□□□□ -0.55
TUBD1-202ENST00000340993 PRPS1P60891 318 aa11.6□□□□□ -0.55
TUBD1-202ENST00000340993 RPL27P61353 136 aaKnown RBP11.6□□□□□ -0.55
TUBD1-202ENST00000340993 SORDQ00796 357 aa11.6□□□□□ -0.55
TUBD1-202ENST00000340993 TLE4Q04727 773 aa11.6□□□□□ -0.55
TUBD1-202ENST00000340993 P2RY6Q15077 328 aa11.6□□□□□ -0.55
TUBD1-202ENST00000340993 C1orf94Q6P1W5 598 aa11.6□□□□□ -0.55
TUBD1-202ENST00000340993 YTHDF3Q7Z739 585 aaKnown RBP11.6□□□□□ -0.55
TUBD1-202ENST00000340993 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.6□□□□□ -0.55
TUBD1-202ENST00000340993 IQCF1Q8N6M8 205 aa11.6□□□□□ -0.55
TUBD1-202ENST00000340993 ATG16L2Q8NAA4 619 aa11.6□□□□□ -0.55
TUBD1-202ENST00000340993 PAPD5Q8NDF8 572 aaKnown RBP11.6□□□□□ -0.55
TUBD1-202ENST00000340993 NOXO1Q8NFA2 376 aa11.6□□□□□ -0.55
TUBD1-202ENST00000340993 OR6X1Q8NH79 312 aa11.6□□□□□ -0.55
TUBD1-202ENST00000340993 PIK3IP1Q96FE7 263 aa11.6□□□□□ -0.55
TUBD1-202ENST00000340993 ERMAPQ96PL5 475 aaPredicted RBP11.6□□□□□ -0.55
TUBD1-202ENST00000340993 FN3KQ9H479 309 aa11.6□□□□□ -0.55
TUBD1-202ENST00000340993 NTN4Q9HB63 628 aa11.6□□□□□ -0.55
TUBD1-202ENST00000340993 FANCFQ9NPI8 374 aa11.6□□□□□ -0.55
TUBD1-202ENST00000340993 GLTPQ9NZD2 209 aa11.6□□□□□ -0.55
TUBD1-202ENST00000340993 RTTNQ86VV8 2226 aa11.6□□□□□ -0.55
TUBD1-202ENST00000340993 LOC102725191A0A1B0GVB3 256 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 H3BN98 237 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 HNRNPRO43390 633 aaKnown RBP11.59□□□□□ -0.55
TUBD1-202ENST00000340993 PTP4A3O75365 173 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 CD14P08571 375 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 PGA4P0DJD7 388 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 PGA3P0DJD8 388 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 ACADSP16219 412 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 NOS3P29474 1203 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 HOXC12P31275 282 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 HMGA2P52926 109 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 TSPAN31Q12999 210 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 ATP6AP1Q15904 470 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 MESTQ5EB52 335 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 ARMC4Q5T2S8 1044 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 KLHL17Q6TDP4 642 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 ZNF620Q6ZNG0 422 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 ZNF295-AS1Q8N0V1 137 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 STEAP2Q8NFT2 490 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 OR8D4Q8NGM9 314 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 NRGNQ92686 78 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 POP5Q969H6 163 aaKnown RBP11.59□□□□□ -0.55
TUBD1-202ENST00000340993 SLC25A44Q96H78 314 aaPredicted RBP11.59□□□□□ -0.55
TUBD1-202ENST00000340993 PKP2Q99959 881 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 SPOCK3Q9BQ16 436 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 B3GAT2Q9NPZ5 323 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 POFUT2Q9Y2G5 429 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 GPR52Q9Y2T5 361 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 PDLIM1O00151 329 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 SIAH2O43255 324 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 BAG2O95816 211 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 TSPAN19P0C672 248 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 PATE4P0C8F1 98 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 EPXP11678 715 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 PIGFQ07326 219 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 KRR1Q13601 381 aaKnown RBP11.59□□□□□ -0.55
TUBD1-202ENST00000340993 GABRA6Q16445 453 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 SLC36A3Q495N2 470 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 LRFN4Q6PJG9 635 aa11.59□□□□□ -0.55
TUBD1-202ENST00000340993 PTCHD4Q6ZW05 846 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms