RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 DDX39BQ13838 428 aaKnown RBP3.56□□□□□ -1.84
SMARCE1-219ENST00000583294 GUCA2BQ16661 112 aa3.56□□□□□ -1.84
SMARCE1-219ENST00000583294 ZBED5Q49AG3 693 aa3.56□□□□□ -1.84
SMARCE1-219ENST00000583294 PIGGQ5H8A4 983 aa3.56□□□□□ -1.84
SMARCE1-219ENST00000583294 PUSL1Q8N0Z8 303 aaKnown RBP3.56□□□□□ -1.84
SMARCE1-219ENST00000583294 UBE2J2Q8N2K1 259 aa3.56□□□□□ -1.84
SMARCE1-219ENST00000583294 ZNF786Q8N393 782 aa3.56□□□□□ -1.84
SMARCE1-219ENST00000583294 OR4F6Q8NGB9 312 aa3.56□□□□□ -1.84
SMARCE1-219ENST00000583294 DNAJC19Q96DA6 116 aa3.56□□□□□ -1.84
SMARCE1-219ENST00000583294 MFFQ9GZY8 342 aa3.56□□□□□ -1.84
SMARCE1-219ENST00000583294 DNTTIP1Q9H147 329 aa3.56□□□□□ -1.84
SMARCE1-219ENST00000583294 CDC42EP4Q9H3Q1 356 aaKnown RBP3.56□□□□□ -1.84
SMARCE1-219ENST00000583294 EXD2Q9NVH0 621 aa3.56□□□□□ -1.84
SMARCE1-219ENST00000583294 STOX2Q9P2F5 926 aaPredicted RBP3.56□□□□□ -1.84
SMARCE1-219ENST00000583294 PRO0461Q9UI25 63 aa3.56□□□□□ -1.84
SMARCE1-219ENST00000583294 ZNFX1Q9P2E3 1918 aaKnown RBP3.55□□□□□ -1.84
SMARCE1-219ENST00000583294 IGHV3-64DA0A0J9YX35 117 aa3.55□□□□□ -1.84
SMARCE1-219ENST00000583294 CCL21O00585 134 aa3.55□□□□□ -1.84
SMARCE1-219ENST00000583294 SLC31A2O15432 143 aa3.55□□□□□ -1.84
SMARCE1-219ENST00000583294 PSTPIP1O43586 416 aa3.55□□□□□ -1.84
SMARCE1-219ENST00000583294 SUPT3HO75486 399 aa3.55□□□□□ -1.84
SMARCE1-219ENST00000583294 FGF1P05230 155 aa3.55□□□□□ -1.84
SMARCE1-219ENST00000583294 HOXA9P31269 272 aa3.55□□□□□ -1.84
SMARCE1-219ENST00000583294 GPR6P46095 362 aaPredicted RBP3.55□□□□□ -1.84
SMARCE1-219ENST00000583294 NPBWR2P48146 333 aa3.55□□□□□ -1.84
SMARCE1-219ENST00000583294 FGF8P55075 233 aaPredicted RBP3.55□□□□□ -1.84
SMARCE1-219ENST00000583294 RPL23AP62750 156 aaKnown RBP3.55□□□□□ -1.84
SMARCE1-219ENST00000583294 AQP6Q13520 282 aa3.55□□□□□ -1.84
SMARCE1-219ENST00000583294 SGCAQ16586 387 aa3.55□□□□□ -1.84
SMARCE1-219ENST00000583294 RUFY3Q7L099 469 aa3.55□□□□□ -1.84
SMARCE1-219ENST00000583294 ZNF557Q8N988 423 aaPredicted RBP3.55□□□□□ -1.84
SMARCE1-219ENST00000583294 DUSP18Q8NEJ0 188 aa3.55□□□□□ -1.84
SMARCE1-219ENST00000583294 SDR42E1Q8WUS8 393 aa3.55□□□□□ -1.84
SMARCE1-219ENST00000583294 SGK3Q96BR1 496 aa3.55□□□□□ -1.84
SMARCE1-219ENST00000583294 FAM210BQ96KR6 192 aa3.55□□□□□ -1.84
SMARCE1-219ENST00000583294 NT5MQ9NPB1 228 aa3.55□□□□□ -1.84
SMARCE1-219ENST00000583294 DMAP1Q9NPF5 467 aaPredicted RBP3.55□□□□□ -1.84
SMARCE1-219ENST00000583294 ZNF226Q9NYT6 803 aa3.55□□□□□ -1.84
SMARCE1-219ENST00000583294 KLK12Q9UKR0 248 aa3.55□□□□□ -1.84
SMARCE1-219ENST00000583294 CDHR2Q9BYE9 1310 aa3.54□□□□□ -1.84
SMARCE1-219ENST00000583294 SYNJ2BP-COX16A0A087WUM0 186 aa3.54□□□□□ -1.84
SMARCE1-219ENST00000583294 IGKV1D-13A0A0B4J2D9 117 aa3.54□□□□□ -1.84
SMARCE1-219ENST00000583294 A0A1W2PPE3 182 aa3.54□□□□□ -1.84
SMARCE1-219ENST00000583294 TMEM50AO95807 157 aa3.54□□□□□ -1.84
SMARCE1-219ENST00000583294 IGKV1-13P0DP09 117 aa3.54□□□□□ -1.84
SMARCE1-219ENST00000583294 CASP14P31944 242 aa3.54□□□□□ -1.84
SMARCE1-219ENST00000583294 YAP1P46937 504 aaKnown RBP3.54□□□□□ -1.84
SMARCE1-219ENST00000583294 SUB1P53999 127 aaKnown RBP eCLIP3.54□□□□□ -1.84
SMARCE1-219ENST00000583294 LRRC63Q05C16 580 aa3.54□□□□□ -1.84
SMARCE1-219ENST00000583294 SMARCB1Q12824 385 aa3.54□□□□□ -1.84
SMARCE1-219ENST00000583294 GGTLC2Q14390 218 aa3.54□□□□□ -1.84
SMARCE1-219ENST00000583294 TMEM183BQ1AE95 376 aa3.54□□□□□ -1.84
SMARCE1-219ENST00000583294 RSPO1Q2MKA7 263 aaPredicted RBP3.54□□□□□ -1.84
SMARCE1-219ENST00000583294 KRTAP13-3Q3SY46 172 aa3.54□□□□□ -1.84
SMARCE1-219ENST00000583294 PRAMEF5Q5TYX0 476 aa3.54□□□□□ -1.84
SMARCE1-219ENST00000583294 PRAMEF6Q5VXH4 476 aa3.54□□□□□ -1.84
SMARCE1-219ENST00000583294 CAMK2N1Q7Z7J9 78 aa3.54□□□□□ -1.84
SMARCE1-219ENST00000583294 EGFL6Q8IUX8 553 aa3.54□□□□□ -1.84
SMARCE1-219ENST00000583294 TMEM183AQ8IXX5 376 aa3.54□□□□□ -1.84
SMARCE1-219ENST00000583294 SLC22A8Q8TCC7 542 aa3.54□□□□□ -1.84
SMARCE1-219ENST00000583294 METTL7AQ9H8H3 244 aa3.54□□□□□ -1.84
SMARCE1-219ENST00000583294 CTNNA3Q9UI47 895 aa3.54□□□□□ -1.84
SMARCE1-219ENST00000583294 PACSIN2Q9UNF0 486 aaPredicted RBP3.54□□□□□ -1.84
SMARCE1-219ENST00000583294 IGLV3-16A0A075B6K0 115 aa3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 PPIAL4EA0A075B759 164 aa3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 CIB4A0PJX0 185 aa3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 ERVV-1B6SEH8 477 aa3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 ANKRD63C9JTQ0 380 aa3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 H3BNH8 94 aa3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 PEX7O00628 323 aa3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 GOSR2O14653 212 aa3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 SS18L1O75177 396 aaPredicted RBP3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 UPK3AO75631 287 aa3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 PLEKP08567 350 aaPredicted RBP3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 PPIAL4FP0DN26 164 aa3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 HNRNPH3P31942 346 aaKnown RBP3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 VHLP40337 213 aa3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 CXCL5P42830 114 aa3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 ACTR3P61158 418 aa3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 HMGN5P82970 282 aaKnown RBP3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 MADCAM1Q13477 382 aa3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 KCTD21Q4G0X4 260 aa3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 TSPO2Q5TGU0 170 aa3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 LINC00173Q6ZV60 143 aa3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 LHFPL3Q86UP9 236 aa3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 NECAB1Q8N987 351 aa3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 OR2L3Q8NG85 312 aa3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 GEMIN6Q8WXD5 167 aaKnown RBP3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 STMN2Q93045 179 aa3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 TUBGCP3Q96CW5 907 aa3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 ASB9Q96DX5 294 aa3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 CEP170P1Q96L14 293 aa3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 ECSITQ9BQ95 431 aa3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 UGT1A7Q9HAW7 530 aa3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 UGT1A10Q9HAW8 530 aa3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 UGT1A8Q9HAW9 530 aa3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 KLHL28Q9NXS3 571 aa3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 IKZF2Q9UKS7 526 aa3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 HPCAL4Q9UM19 191 aa3.53□□□□□ -1.84
SMARCE1-219ENST00000583294 PIKFYVEQ9Y2I7 2098 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms