RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 IGHV3-9P01782 118 aa9.72□□□□□ -0.85
CHD3-216ENST00000573936 CD99P14209 185 aa9.72□□□□□ -0.85
CHD3-216ENST00000573936 MAKP20794 623 aa9.72□□□□□ -0.85
CHD3-216ENST00000573936 EDNRAP25101 427 aa9.72□□□□□ -0.85
CHD3-216ENST00000573936 AQP2P41181 271 aa9.72□□□□□ -0.85
CHD3-216ENST00000573936 DAP3P51398 398 aaKnown RBP9.72□□□□□ -0.85
CHD3-216ENST00000573936 HMGA2P52926 109 aa9.72□□□□□ -0.85
CHD3-216ENST00000573936 ACTR3P61158 418 aa9.72□□□□□ -0.85
CHD3-216ENST00000573936 RPL18Q07020 188 aaKnown RBP9.72□□□□□ -0.85
CHD3-216ENST00000573936 OR2T5Q6IEZ7 315 aa9.72□□□□□ -0.85
CHD3-216ENST00000573936 HMBOX1Q6NT76 420 aa9.72□□□□□ -0.85
CHD3-216ENST00000573936 NHLRC1Q6VVB1 395 aa9.72□□□□□ -0.85
CHD3-216ENST00000573936 SLC35D2Q76EJ3 337 aa9.72□□□□□ -0.85
CHD3-216ENST00000573936 ADGRG5Q8IZF4 528 aa9.72□□□□□ -0.85
CHD3-216ENST00000573936 GPR137CQ8N3F9 429 aa9.72□□□□□ -0.85
CHD3-216ENST00000573936 C1orf162Q8NEQ5 155 aaPredicted RBP9.72□□□□□ -0.85
CHD3-216ENST00000573936 OR4K5Q8NGD3 323 aa9.72□□□□□ -0.85
CHD3-216ENST00000573936 OR2T29Q8NH02 315 aa9.72□□□□□ -0.85
CHD3-216ENST00000573936 OR6X1Q8NH79 312 aa9.72□□□□□ -0.85
CHD3-216ENST00000573936 ALPK1Q96QP1 1244 aa9.72□□□□□ -0.85
CHD3-216ENST00000573936 OR2M2Q96R28 347 aa9.72□□□□□ -0.85
CHD3-216ENST00000573936 FUZQ9BT04 418 aa9.72□□□□□ -0.85
CHD3-216ENST00000573936 CHID1Q9BWS9 393 aa9.72□□□□□ -0.85
CHD3-216ENST00000573936 TRBV4-1A0A0J9YWV2 114 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 TCRBV3S1A0A5B6 114 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 NPIPB13A6NJU9 1138 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 A6NNC1 897 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 CENPBD1B2RD01 187 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 NPIPB4C9JG80 1138 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 MCIDASD6RGH6 385 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 RPL36A-HNRNPH2H7BZ11 118 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 PDLIM1O00151 329 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 CLOCKO15516 846 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 OR10H3O60404 316 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 SERPINI2O75830 405 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 CST1P01037 141 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 IFNGR1P15260 489 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 FUT4P22083 530 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 CRYGSP22914 178 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 PAX7P23759 505 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 DNAJA1P31689 397 aaKnown RBP9.71□□□□□ -0.86
CHD3-216ENST00000573936 CCKARP32238 428 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 OMPP47874 163 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 SH3BGRP55822 239 aaPredicted RBP9.71□□□□□ -0.86
CHD3-216ENST00000573936 BIDP55957 195 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 LAPTM4AQ15012 233 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 ZBED5Q49AG3 693 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 ALG10Q5BKT4 473 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 TIMM23BQ5SRD1 257 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 ANKRD34AQ69YU3 496 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 C20orf196Q8IYI0 205 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 C17orf78Q8N4C9 275 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 OR6N1Q8NGY5 312 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 GNPDA2Q8TDQ7 276 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 CANT1Q8WVQ1 401 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 S100PBPQ96BU1 408 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 MUCL1Q96DR8 90 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 SLC25A44Q96H78 314 aaPredicted RBP9.71□□□□□ -0.86
CHD3-216ENST00000573936 BOD1Q96IK1 185 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 RSRC1Q96IZ7 334 aaKnown RBP9.71□□□□□ -0.86
CHD3-216ENST00000573936 TXNDC15Q96J42 360 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 MUS81Q96NY9 551 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 TNFRSF13CQ96RJ3 184 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 EMC6Q9BV81 110 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 REEP1Q9H902 201 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 NGBQ9NPG2 151 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 MED29Q9NX70 200 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 LYVE1Q9Y5Y7 322 aa9.71□□□□□ -0.86
CHD3-216ENST00000573936 UNC119BA6NIH7 251 aa9.7□□□□□ -0.86
CHD3-216ENST00000573936 GNGT2O14610 69 aa9.7□□□□□ -0.86
CHD3-216ENST00000573936 ENTPD5O75356 428 aa9.7□□□□□ -0.86
CHD3-216ENST00000573936 UPK3AO75631 287 aa9.7□□□□□ -0.86
CHD3-216ENST00000573936 CCNB2O95067 398 aa9.7□□□□□ -0.86
CHD3-216ENST00000573936 IGHG1P01857 330 aa9.7□□□□□ -0.86
CHD3-216ENST00000573936 F13BP05160 661 aa9.7□□□□□ -0.86
CHD3-216ENST00000573936 ITGA5P08648 1049 aa9.7□□□□□ -0.86
CHD3-216ENST00000573936 NR2C1P13056 603 aa9.7□□□□□ -0.86
CHD3-216ENST00000573936 HOXB1P14653 301 aaPredicted RBP9.7□□□□□ -0.86
CHD3-216ENST00000573936 HOXC12P31275 282 aa9.7□□□□□ -0.86
CHD3-216ENST00000573936 GPR4P46093 362 aa9.7□□□□□ -0.86
CHD3-216ENST00000573936 LIMS1P48059 325 aa9.7□□□□□ -0.86
CHD3-216ENST00000573936 CSNK1A1P48729 337 aa9.7□□□□□ -0.86
CHD3-216ENST00000573936 CTXN1P60606 82 aa9.7□□□□□ -0.86
CHD3-216ENST00000573936 RPS4XP62701 263 aaKnown RBP9.7□□□□□ -0.86
CHD3-216ENST00000573936 ELF3P78545 371 aaPredicted RBP9.7□□□□□ -0.86
CHD3-216ENST00000573936 LSM11P83369 360 aaKnown RBP eCLIP9.7□□□□□ -0.86
CHD3-216ENST00000573936 ROR2Q01974 943 aaKnown RBP9.7□□□□□ -0.86
CHD3-216ENST00000573936 CAMK2DQ13557 499 aa9.7□□□□□ -0.86
CHD3-216ENST00000573936 SEC23BQ15437 767 aa9.7□□□□□ -0.86
CHD3-216ENST00000573936 TSC22D1Q15714 1073 aa9.7□□□□□ -0.86
CHD3-216ENST00000573936 STK11Q15831 433 aa9.7□□□□□ -0.86
CHD3-216ENST00000573936 GABRA6Q16445 453 aa9.7□□□□□ -0.86
CHD3-216ENST00000573936 CARD17Q5XLA6 110 aa9.7□□□□□ -0.86
CHD3-216ENST00000573936 FBXW10Q5XX13 1052 aa9.7□□□□□ -0.86
CHD3-216ENST00000573936 FAM205BPQ63HN1 556 aa9.7□□□□□ -0.86
CHD3-216ENST00000573936 TMEM200AQ86VY9 491 aa9.7□□□□□ -0.86
CHD3-216ENST00000573936 TMEM123Q8N131 208 aa9.7□□□□□ -0.86
CHD3-216ENST00000573936 PAPD5Q8NDF8 572 aaKnown RBP9.7□□□□□ -0.86
CHD3-216ENST00000573936 OR51A7Q8NH64 312 aa9.7□□□□□ -0.86
CHD3-216ENST00000573936 MOSPD2Q8NHP6 518 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms