RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 KCNMB4Q86W47 210 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 PAQR7Q86WK9 346 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 ZGRF1Q86YA3 2104 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 LDLRAD3Q86YD5 345 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 SRRM1Q8IYB3 904 aaKnown RBP2.76□□□□□ -1.97
CNOT1-221ENST00000569924 LINC00518Q8N0U6 118 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 GPR137CQ8N3F9 429 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 NANOGP1Q8N7R0 232 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 TCEANCQ8N8B7 351 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 C17orf47Q8NEP4 570 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 OR4E2Q8NGC2 313 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 OR2Y1Q8NGV0 311 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 OR2L2Q8NH16 312 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 OR1L3Q8NH93 324 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 LCN9Q8WX39 176 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.76□□□□□ -1.97
CNOT1-221ENST00000569924 C12orf66Q96MD2 445 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 OLFM3Q96PB7 478 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 RBM14Q96PK6 669 aaKnown RBP2.76□□□□□ -1.97
CNOT1-221ENST00000569924 CHP1Q99653 195 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 LPAR4Q99677 370 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 C19orf43Q9BQ61 176 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 BPIFA3Q9BQP9 254 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 RHOXF2Q9BQY4 288 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 LRRC1Q9BTT6 524 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 NAT10Q9H0A0 1025 aaKnown RBP2.76□□□□□ -1.97
CNOT1-221ENST00000569924 ILKAPQ9H0C8 392 aaPredicted RBP2.76□□□□□ -1.97
CNOT1-221ENST00000569924 STMN4Q9H169 189 aaPredicted RBP2.76□□□□□ -1.97
CNOT1-221ENST00000569924 SRMSQ9H3Y6 488 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 UGT1A7Q9HAW7 530 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 UGT1A10Q9HAW8 530 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 UGT1A8Q9HAW9 530 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 AGPAT4Q9NRZ5 378 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 IMP3Q9NV31 184 aaKnown RBP2.76□□□□□ -1.97
CNOT1-221ENST00000569924 UVRAGQ9P2Y5 699 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 EMCNQ9ULC0 261 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 GRID1Q9ULK0 1009 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 FZR1Q9UM11 496 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 RPH3ALQ9UNE2 315 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 PSMD13Q9UNM6 376 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 NTNG1Q9Y2I2 539 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 DMRT1Q9Y5R6 373 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 FKBP7Q9Y680 259 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 FN1P02751 2386 aaKnown RBP2.76□□□□□ -1.97
CNOT1-221ENST00000569924 MDC1Q14676 2089 aaKnown RBP2.76□□□□□ -1.97
CNOT1-221ENST00000569924 CROCCQ5TZA2 2017 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 PDZD2O15018 2839 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 PCLOQ9Y6V0 5065 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 DOCK10Q96BY6 2186 aa2.76□□□□□ -1.97
CNOT1-221ENST00000569924 NUP210LQ5VU65 1888 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 CCDC88CQ9P219 2028 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 A0A087WUV0 522 aaPredicted RBP2.75□□□□□ -1.97
CNOT1-221ENST00000569924 A0A087WZ39 114 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 A0A087X0T9 212 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 TRBV4-1A0A0J9YWV2 114 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 A0A1B0GUH1 482 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 OR2AG2A6NM03 316 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 SNTNA6NMZ2 147 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 C2orf74A8MZ97 194 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 HNRNPCL2B2RXH8 293 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 H3BMH7 237 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 PRRG2O14669 202 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 IMPA2O14732 288 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 STX7O15400 261 aaKnown RBP2.75□□□□□ -1.97
CNOT1-221ENST00000569924 CFLARO15519 480 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 ZNF749O43361 778 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 MTRF1O75570 445 aaKnown RBP2.75□□□□□ -1.97
CNOT1-221ENST00000569924 OR2B3O76000 313 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 ANXA9O76027 345 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 SCGNO76038 276 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 KRT14P02533 472 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 PRSS2P07478 247 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 LYNP07948 512 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 F7P08709 466 aaPredicted RBP2.75□□□□□ -1.97
CNOT1-221ENST00000569924 STSP08842 583 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 H2AFZP0C0S5 128 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 FRMD6-AS1P0C7T7 363 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 FAM228BP0C875 321 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 RALBP11234 206 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 ZNF12P17014 697 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 PCMT1P22061 227 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 MMP11P24347 488 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 HNRNPH3P31942 346 aaKnown RBP2.75□□□□□ -1.97
CNOT1-221ENST00000569924 CA5AP35218 305 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 FEN1P39748 380 aaKnown RBP2.75□□□□□ -1.97
CNOT1-221ENST00000569924 MAGEA1P43355 309 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 GABRA4P48169 554 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 CCT3P49368 545 aaKnown RBP2.75□□□□□ -1.97
CNOT1-221ENST00000569924 PRLHRP49683 370 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 PLA2G16P53816 162 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 SEC61GP60059 68 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 EIF3EP60228 445 aaKnown RBP2.75□□□□□ -1.97
CNOT1-221ENST00000569924 XIAPP98170 497 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 POU3F1Q03052 451 aaPredicted RBP2.75□□□□□ -1.97
CNOT1-221ENST00000569924 TGM3Q08188 693 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 ART3Q13508 389 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 MESDQ14696 234 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 TAF1AQ15573 450 aaPredicted RBP2.75□□□□□ -1.97
CNOT1-221ENST00000569924 SLC1A5Q15758 541 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 ZNF658BQ4V348 819 aaPredicted RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms