RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 ZNF222Q9UK12 451 aa1.46□□□□□ -2.18
UBR1-209ENST00000569243 AURKCQ9UQB9 309 aa1.46□□□□□ -2.18
UBR1-209ENST00000569243 F11RQ9Y624 299 aaKnown RBP1.46□□□□□ -2.18
UBR1-209ENST00000569243 TMEM14AQ9Y6G1 99 aa1.46□□□□□ -2.18
UBR1-209ENST00000569243 PTPRTO14522 1441 aa1.46□□□□□ -2.18
UBR1-209ENST00000569243 NFASCO94856 1347 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 IGLV3-12A0A075B6K2 115 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 ZNF233A6NK53 670 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 UBXN8O00124 270 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 MAPK13O15264 365 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 PEX11AO75192 247 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 DIRAS3O95661 229 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 AP2A1O95782 977 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 ALDOBP05062 364 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 CSF3P09919 207 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 UBTFL1P0CB47 393 aaPredicted RBP1.45□□□□□ -2.18
UBR1-209ENST00000569243 IGHV1-8P0DP01 117 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 NCF1P14598 390 aaPredicted RBP1.45□□□□□ -2.18
UBR1-209ENST00000569243 TAGLN2P37802 199 aaKnown RBP1.45□□□□□ -2.18
UBR1-209ENST00000569243 CRYBB1P53674 252 aaPredicted RBP1.45□□□□□ -2.18
UBR1-209ENST00000569243 BEX3Q00994 111 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 ACVR1Q04771 509 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 LRRC74AQ0VAA2 488 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 FZD2Q14332 565 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 RABL6Q3YEC7 729 aaPredicted RBP1.45□□□□□ -2.18
UBR1-209ENST00000569243 CEP55Q53EZ4 464 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 SLC25A24Q6NUK1 477 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 CCDC50Q8IVM0 306 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 RNF139Q8WU17 664 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 SHC3Q92529 594 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 ESR2Q92731 530 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 PELI1Q96FA3 418 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 WFIKKN1Q96NZ8 548 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 TSSK3Q96PN8 268 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 CCT7Q99832 543 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 ERP44Q9BS26 406 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 CRACR2AQ9BSW2 395 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 EDEM2Q9BV94 578 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 RWDD1Q9H446 243 aaPredicted RBP1.45□□□□□ -2.18
UBR1-209ENST00000569243 RNF167Q9H6Y7 350 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 EXD2Q9NVH0 621 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 GIN1Q9NXP7 522 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 TAS2R3Q9NYW6 316 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 CALYQ9NYX4 217 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 SPATA7Q9P0W8 599 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 ZNRD1Q9P1U0 126 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 PTBP2Q9UKA9 531 aaKnown RBP1.45□□□□□ -2.18
UBR1-209ENST00000569243 TMCO1Q9UM00 188 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 OR10H1Q9Y4A9 318 aa1.45□□□□□ -2.18
UBR1-209ENST00000569243 LINC00854A0A1B0GVQ3 168 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 A0A1W2PP18 115 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 LRP5LA4QPB2 252 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 H0YHG0 523 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 AP3B1O00203 1094 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 BCAS1O75363 584 aaPredicted RBP1.44□□□□□ -2.18
UBR1-209ENST00000569243 UPK3AO75631 287 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 SRP72O76094 671 aaKnown RBP1.44□□□□□ -2.18
UBR1-209ENST00000569243 PCMT1P22061 227 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 GCAP28676 217 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 ATP5OP48047 213 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 ACTR1AP61163 376 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 ESRRGP62508 458 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 CCNA1P78396 465 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 REG3AQ06141 175 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 DMTNQ08495 405 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 ELP6Q0PNE2 266 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 C1orf61Q13536 156 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 GANABQ14697 944 aaKnown RBP1.44□□□□□ -2.18
UBR1-209ENST00000569243 OXA1LQ15070 435 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 PYHIN1Q6K0P9 492 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 C1orf94Q6P1W5 598 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 PEX26Q7Z412 305 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 WDR86Q86TI4 376 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 BIVMQ86UB2 503 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 NBPF5PQ86XG9 351 aaPredicted RBP1.44□□□□□ -2.18
UBR1-209ENST00000569243 GATSQ8NAP1 163 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 FNDC5Q8NAU1 212 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 GMCL1P1Q8NEA9 526 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 OR4D5Q8NGN0 318 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 SYNPRQ8TBG9 265 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 ZNF75CPQ92670 426 aaPredicted RBP1.44□□□□□ -2.18
UBR1-209ENST00000569243 OSTF1Q92882 214 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 DNAJC19Q96DA6 116 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 OXGR1Q96P68 337 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 RNF157Q96PX1 679 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 RNF2Q99496 336 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 GBA3Q9H227 469 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 VPS37BQ9H9H4 285 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 NHEJ1Q9H9Q4 299 aaPredicted RBP1.44□□□□□ -2.18
UBR1-209ENST00000569243 DDX18Q9NVP1 670 aaKnown RBP1.44□□□□□ -2.18
UBR1-209ENST00000569243 TMOD2Q9NZR1 351 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 CTNNA3Q9UI47 895 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 RPH3ALQ9UNE2 315 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 WDR62O43379 1518 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.44□□□□□ -2.18
UBR1-209ENST00000569243 MUC6Q6W4X9 2439 aa1.44□□□□□ -2.18
UBR1-209ENST00000569243 SHROOM3Q8TF72 1996 aa1.43□□□□□ -2.18
UBR1-209ENST00000569243 ARPC4-TTLL3A0A0A6YYG9 625 aa1.43□□□□□ -2.18
UBR1-209ENST00000569243 CLRN2A0PK11 232 aa1.43□□□□□ -2.18
UBR1-209ENST00000569243 GPR89AB7ZAQ6 455 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms