RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 CCNB2O95067 398 aa14.71□□□□□ -0.05
RNF40-206ENST00000564260 NDUFB2O95178 105 aa14.71□□□□□ -0.05
RNF40-206ENST00000564260 HLA-DOBP13765 273 aa14.71□□□□□ -0.05
RNF40-206ENST00000564260 GSTM3P21266 225 aa14.71□□□□□ -0.05
RNF40-206ENST00000564260 FUT4P22083 530 aa14.71□□□□□ -0.05
RNF40-206ENST00000564260 IGHV1-2P23083 117 aa14.71□□□□□ -0.05
RNF40-206ENST00000564260 DNAJA1P31689 397 aaKnown RBP14.71□□□□□ -0.05
RNF40-206ENST00000564260 AQP2P41181 271 aa14.71□□□□□ -0.05
RNF40-206ENST00000564260 GSSP48637 474 aa14.71□□□□□ -0.05
RNF40-206ENST00000564260 ARHGDIAP52565 204 aa14.71□□□□□ -0.05
RNF40-206ENST00000564260 RAP1BP61224 184 aa14.71□□□□□ -0.05
RNF40-206ENST00000564260 RAP1AP62834 184 aa14.71□□□□□ -0.05
RNF40-206ENST00000564260 COX10Q12887 443 aa14.71□□□□□ -0.05
RNF40-206ENST00000564260 MICAQ29983 383 aa14.71□□□□□ -0.05
RNF40-206ENST00000564260 NRN1LQ496H8 165 aa14.71□□□□□ -0.05
RNF40-206ENST00000564260 HMBOX1Q6NT76 420 aa14.71□□□□□ -0.05
RNF40-206ENST00000564260 ZNF627Q7L945 461 aa14.71□□□□□ -0.05
RNF40-206ENST00000564260 ZER1Q7Z7L7 766 aa14.71□□□□□ -0.05
RNF40-206ENST00000564260 GNPDA2Q8TDQ7 276 aa14.71□□□□□ -0.05
RNF40-206ENST00000564260 FAM46AQ96IP4 442 aaKnown RBP14.71□□□□□ -0.05
RNF40-206ENST00000564260 DGCR6LQ9BY27 220 aa14.71□□□□□ -0.05
RNF40-206ENST00000564260 SMURF2Q9HAU4 748 aa14.71□□□□□ -0.05
RNF40-206ENST00000564260 CRIM1Q9NZV1 1036 aa14.71□□□□□ -0.05
RNF40-206ENST00000564260 MGAT4BQ9UQ53 548 aa14.71□□□□□ -0.05
RNF40-206ENST00000564260 MAGED1Q9Y5V3 778 aaPredicted RBP14.71□□□□□ -0.05
RNF40-206ENST00000564260 UNC79Q9P2D8 2635 aa14.7□□□□□ -0.06
RNF40-206ENST00000564260 FAM221AA4D161 298 aa14.7□□□□□ -0.06
RNF40-206ENST00000564260 UNC119BA6NIH7 251 aa14.7□□□□□ -0.06
RNF40-206ENST00000564260 OR5H1A6NKK0 313 aa14.7□□□□□ -0.06
RNF40-206ENST00000564260 MCIDASD6RGH6 385 aa14.7□□□□□ -0.06
RNF40-206ENST00000564260 GNGT2O14610 69 aa14.7□□□□□ -0.06
RNF40-206ENST00000564260 PTP4A3O75365 173 aa14.7□□□□□ -0.06
RNF40-206ENST00000564260 CD14P08571 375 aa14.7□□□□□ -0.06
RNF40-206ENST00000564260 CRYGSP22914 178 aa14.7□□□□□ -0.06
RNF40-206ENST00000564260 HOXC12P31275 282 aa14.7□□□□□ -0.06
RNF40-206ENST00000564260 GPR4P46093 362 aa14.7□□□□□ -0.06
RNF40-206ENST00000564260 CSNK1A1P48729 337 aa14.7□□□□□ -0.06
RNF40-206ENST00000564260 BIDP55957 195 aa14.7□□□□□ -0.06
RNF40-206ENST00000564260 ACTR3P61158 418 aa14.7□□□□□ -0.06
RNF40-206ENST00000564260 LSM11P83369 360 aaKnown RBP eCLIP14.7□□□□□ -0.06
RNF40-206ENST00000564260 FHL1Q13642 323 aa14.7□□□□□ -0.06
RNF40-206ENST00000564260 ACKR1Q16570 336 aa14.7□□□□□ -0.06
RNF40-206ENST00000564260 GPR139Q6DWJ6 353 aa14.7□□□□□ -0.06
RNF40-206ENST00000564260 ZNF770Q6IQ21 691 aaPredicted RBP14.7□□□□□ -0.06
RNF40-206ENST00000564260 ZFP1Q6P2D0 407 aa14.7□□□□□ -0.06
RNF40-206ENST00000564260 PGBD2Q6P3X8 592 aa14.7□□□□□ -0.06
RNF40-206ENST00000564260 CD300LDQ6UXZ3 194 aa14.7□□□□□ -0.06
RNF40-206ENST00000564260 DPY19L2P2Q6ZN68 376 aa14.7□□□□□ -0.06
RNF40-206ENST00000564260 CLDN22Q8N7P3 220 aa14.7□□□□□ -0.06
RNF40-206ENST00000564260 LRRC75AQ8NAA5 344 aa14.7□□□□□ -0.06
RNF40-206ENST00000564260 DNAJC9Q8WXX5 260 aa14.7□□□□□ -0.06
RNF40-206ENST00000564260 MUCL1Q96DR8 90 aa14.7□□□□□ -0.06
RNF40-206ENST00000564260 ALG12Q9BV10 488 aa14.7□□□□□ -0.06
RNF40-206ENST00000564260 MCCC2Q9HCC0 563 aa14.7□□□□□ -0.06
RNF40-206ENST00000564260 MED29Q9NX70 200 aa14.7□□□□□ -0.06
RNF40-206ENST00000564260 CIB4A0PJX0 185 aa14.69□□□□□ -0.06
RNF40-206ENST00000564260 IMPA2O14732 288 aa14.69□□□□□ -0.06
RNF40-206ENST00000564260 ITGA5P08648 1049 aa14.69□□□□□ -0.06
RNF40-206ENST00000564260 PGA4P0DJD7 388 aa14.69□□□□□ -0.06
RNF40-206ENST00000564260 PGA3P0DJD8 388 aa14.69□□□□□ -0.06
RNF40-206ENST00000564260 EDNRAP25101 427 aa14.69□□□□□ -0.06
RNF40-206ENST00000564260 ZNF133P52736 654 aaPredicted RBP14.69□□□□□ -0.06
RNF40-206ENST00000564260 NR1H2P55055 460 aa14.69□□□□□ -0.06
RNF40-206ENST00000564260 RPL27P61353 136 aaKnown RBP14.69□□□□□ -0.06
RNF40-206ENST00000564260 GABRA6Q16445 453 aa14.69□□□□□ -0.06
RNF40-206ENST00000564260 HIST3H3Q16695 136 aa14.69□□□□□ -0.06
RNF40-206ENST00000564260 ARMC4Q5T2S8 1044 aa14.69□□□□□ -0.06
RNF40-206ENST00000564260 ANKRD16Q6P6B7 361 aa14.69□□□□□ -0.06
RNF40-206ENST00000564260 SMARCD3Q6STE5 483 aa14.69□□□□□ -0.06
RNF40-206ENST00000564260 OR13C2Q8NGS9 318 aa14.69□□□□□ -0.06
RNF40-206ENST00000564260 OR6N1Q8NGY5 312 aa14.69□□□□□ -0.06
RNF40-206ENST00000564260 OR51A7Q8NH64 312 aa14.69□□□□□ -0.06
RNF40-206ENST00000564260 ASB10Q8WXI3 467 aa14.69□□□□□ -0.06
RNF40-206ENST00000564260 TMEM54Q969K7 222 aa14.69□□□□□ -0.06
RNF40-206ENST00000564260 UTP4Q969X6 686 aaKnown RBP14.69□□□□□ -0.06
RNF40-206ENST00000564260 S100PBPQ96BU1 408 aa14.69□□□□□ -0.06
RNF40-206ENST00000564260 WFIKKN1Q96NZ8 548 aa14.69□□□□□ -0.06
RNF40-206ENST00000564260 TNFRSF13CQ96RJ3 184 aa14.69□□□□□ -0.06
RNF40-206ENST00000564260 MRPL13Q9BYD1 178 aaKnown RBP14.69□□□□□ -0.06
RNF40-206ENST00000564260 NRIP3Q9NQ35 241 aa14.69□□□□□ -0.06
RNF40-206ENST00000564260 GLTPQ9NZD2 209 aa14.69□□□□□ -0.06
RNF40-206ENST00000564260 AMDHD2Q9Y303 409 aa14.69□□□□□ -0.06
RNF40-206ENST00000564260 AP4S1Q9Y587 144 aa14.69□□□□□ -0.06
RNF40-206ENST00000564260 TRAV27A0A087WT01 109 aa14.68□□□□□ -0.06
RNF40-206ENST00000564260 A6NNC1 897 aa14.68□□□□□ -0.06
RNF40-206ENST00000564260 ZNF99A8MXY4 864 aaPredicted RBP14.68□□□□□ -0.06
RNF40-206ENST00000564260 IDH3BO43837 385 aa14.68□□□□□ -0.06
RNF40-206ENST00000564260 UPK3AO75631 287 aa14.68□□□□□ -0.06
RNF40-206ENST00000564260 LYZL6O75951 148 aa14.68□□□□□ -0.06
RNF40-206ENST00000564260 F13BP05160 661 aa14.68□□□□□ -0.06
RNF40-206ENST00000564260 ACADSP16219 412 aa14.68□□□□□ -0.06
RNF40-206ENST00000564260 FASP25445 335 aa14.68□□□□□ -0.06
RNF40-206ENST00000564260 COL8A1P27658 744 aa14.68□□□□□ -0.06
RNF40-206ENST00000564260 RPS6KA3P51812 740 aa14.68□□□□□ -0.06
RNF40-206ENST00000564260 CTXN1P60606 82 aa14.68□□□□□ -0.06
RNF40-206ENST00000564260 ROR2Q01974 943 aaKnown RBP14.68□□□□□ -0.06
RNF40-206ENST00000564260 FOXD4Q12950 439 aaPredicted RBP14.68□□□□□ -0.06
RNF40-206ENST00000564260 CCNIQ14094 377 aa14.68□□□□□ -0.06
RNF40-206ENST00000564260 LAPTM4AQ15012 233 aa14.68□□□□□ -0.06
RNF40-206ENST00000564260 RFX4Q33E94 735 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms