RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 MFRPQ9BY79 579 aa19.36■□□□□ 0.69
SMC4-221ENST00000489573 ASB6Q9NWX5 421 aa19.36■□□□□ 0.69
SMC4-221ENST00000489573 PCDHGB7Q9Y5F8 929 aa19.36■□□□□ 0.69
SMC4-221ENST00000489573 RAMP1O60894 148 aa19.36■□□□□ 0.69
SMC4-221ENST00000489573 GSTT1P30711 240 aa19.36■□□□□ 0.69
SMC4-221ENST00000489573 ATP6V1E1P36543 226 aa19.36■□□□□ 0.69
SMC4-221ENST00000489573 CARD18P57730 90 aa19.36■□□□□ 0.69
SMC4-221ENST00000489573 C1DQ13901 141 aaKnown RBP19.36■□□□□ 0.69
SMC4-221ENST00000489573 B3GLCTQ6Y288 498 aa19.36■□□□□ 0.69
SMC4-221ENST00000489573 B3GNT6Q6ZMB0 384 aa19.36■□□□□ 0.69
SMC4-221ENST00000489573 SHFQ7M4L6 423 aa19.36■□□□□ 0.69
SMC4-221ENST00000489573 GPAT4Q86UL3 456 aa19.36■□□□□ 0.69
SMC4-221ENST00000489573 EXD3Q8N9H8 876 aa19.36■□□□□ 0.69
SMC4-221ENST00000489573 OR51G2Q8NGK0 314 aa19.36■□□□□ 0.69
SMC4-221ENST00000489573 OR10D3Q8NH80 312 aa19.36■□□□□ 0.69
SMC4-221ENST00000489573 FCGR1BQ92637 280 aa19.36■□□□□ 0.69
SMC4-221ENST00000489573 RORBQ92753 470 aa19.36■□□□□ 0.69
SMC4-221ENST00000489573 HAO2Q9NYQ3 351 aa19.36■□□□□ 0.69
SMC4-221ENST00000489573 TAS2R16Q9NYV7 291 aa19.36■□□□□ 0.69
SMC4-221ENST00000489573 APC2O95996 2303 aa19.35■□□□□ 0.69
SMC4-221ENST00000489573 PRSS37A4D1T9 235 aa19.35■□□□□ 0.69
SMC4-221ENST00000489573 TFECO14948 347 aaPredicted RBP19.35■□□□□ 0.69
SMC4-221ENST00000489573 TRAF3IP2O43734 574 aaPredicted RBP19.35■□□□□ 0.69
SMC4-221ENST00000489573 CXCL13O43927 109 aa19.35■□□□□ 0.69
SMC4-221ENST00000489573 VAMP5O95183 116 aa19.35■□□□□ 0.69
SMC4-221ENST00000489573 ZNF24P17028 368 aa19.35■□□□□ 0.69
SMC4-221ENST00000489573 ENPP1P22413 925 aa19.35■□□□□ 0.69
SMC4-221ENST00000489573 EIF1AXP47813 144 aaKnown RBP19.35■□□□□ 0.69
SMC4-221ENST00000489573 PON3Q15166 354 aa19.35■□□□□ 0.69
SMC4-221ENST00000489573 RNLSQ5VYX0 342 aa19.35■□□□□ 0.69
SMC4-221ENST00000489573 NHLRC1Q6VVB1 395 aa19.35■□□□□ 0.69
SMC4-221ENST00000489573 GPR141Q7Z602 305 aa19.35■□□□□ 0.69
SMC4-221ENST00000489573 OR4F15Q8NGB8 312 aa19.35■□□□□ 0.69
SMC4-221ENST00000489573 OR2T4Q8NH00 348 aa19.35■□□□□ 0.69
SMC4-221ENST00000489573 NEIL3Q8TAT5 605 aa19.35■□□□□ 0.69
SMC4-221ENST00000489573 ABTB1Q969K4 478 aaPredicted RBP19.35■□□□□ 0.69
SMC4-221ENST00000489573 TMIGD2Q96BF3 282 aa19.35■□□□□ 0.69
SMC4-221ENST00000489573 UCN2Q96RP3 112 aa19.35■□□□□ 0.69
SMC4-221ENST00000489573 TUBA1CQ9BQE3 449 aa19.35■□□□□ 0.69
SMC4-221ENST00000489573 DEFB127Q9H1M4 99 aa19.35■□□□□ 0.69
SMC4-221ENST00000489573 SYT4Q9H2B2 425 aa19.35■□□□□ 0.69
SMC4-221ENST00000489573 TIGARQ9NQ88 270 aa19.35■□□□□ 0.69
SMC4-221ENST00000489573 MED29Q9NX70 200 aa19.35■□□□□ 0.69
SMC4-221ENST00000489573 VSX1Q9NZR4 365 aaPredicted RBP19.35■□□□□ 0.69
SMC4-221ENST00000489573 TNFRSF10DQ9UBN6 386 aa19.35■□□□□ 0.69
SMC4-221ENST00000489573 LIPGQ9Y5X9 500 aa19.35■□□□□ 0.69
SMC4-221ENST00000489573 MED12Q93074 2177 aa19.35■□□□□ 0.69
SMC4-221ENST00000489573 FREM3P0C091 2139 aa19.35■□□□□ 0.69
SMC4-221ENST00000489573 IGHV3-15A0A0B4J1V0 119 aa19.34■□□□□ 0.69
SMC4-221ENST00000489573 ZNF99A8MXY4 864 aaPredicted RBP19.34■□□□□ 0.69
SMC4-221ENST00000489573 ACTL6AO96019 429 aa19.34■□□□□ 0.69
SMC4-221ENST00000489573 PDGFAP04085 211 aa19.34■□□□□ 0.69
SMC4-221ENST00000489573 ZNF708P17019 499 aa19.34■□□□□ 0.69
SMC4-221ENST00000489573 ZNF43P17038 809 aa19.34■□□□□ 0.69
SMC4-221ENST00000489573 MYL12AP19105 171 aa19.34■□□□□ 0.69
SMC4-221ENST00000489573 CLDN15P56746 228 aa19.34■□□□□ 0.69
SMC4-221ENST00000489573 CLDN18P56856 261 aa19.34■□□□□ 0.69
SMC4-221ENST00000489573 POU4F2Q12837 409 aa19.34■□□□□ 0.69
SMC4-221ENST00000489573 RAB39AQ14964 217 aa19.34■□□□□ 0.69
SMC4-221ENST00000489573 TBR1Q16650 682 aa19.34■□□□□ 0.69
SMC4-221ENST00000489573 Q6ZS92 163 aa19.34■□□□□ 0.69
SMC4-221ENST00000489573 HDDC2Q7Z4H3 204 aa19.34■□□□□ 0.69
SMC4-221ENST00000489573 PM20D2Q8IYS1 436 aa19.34■□□□□ 0.69
SMC4-221ENST00000489573 MEIOBQ8N635 442 aa19.34■□□□□ 0.69
SMC4-221ENST00000489573 TXNDC15Q96J42 360 aa19.34■□□□□ 0.69
SMC4-221ENST00000489573 LDAHQ9H6V9 325 aa19.34■□□□□ 0.69
SMC4-221ENST00000489573 EXO5Q9H790 373 aa19.34■□□□□ 0.69
SMC4-221ENST00000489573 MOKQ9UQ07 419 aa19.34■□□□□ 0.69
SMC4-221ENST00000489573 EXOSC1Q9Y3B2 195 aaKnown RBP19.34■□□□□ 0.69
SMC4-221ENST00000489573 FRYQ5TBA9 3013 aa19.34■□□□□ 0.69
SMC4-221ENST00000489573 TRGV5A0A0B4J1U4 118 aa19.33■□□□□ 0.69
SMC4-221ENST00000489573 SMIM31A0A1B0GVY4 71 aa19.33■□□□□ 0.69
SMC4-221ENST00000489573 SMAD9O15198 467 aaKnown RBP19.33■□□□□ 0.69
SMC4-221ENST00000489573 GLCEO94923 617 aa19.33■□□□□ 0.69
SMC4-221ENST00000489573 ITGB2P05107 769 aa19.33■□□□□ 0.69
SMC4-221ENST00000489573 BIDP55957 195 aa19.33■□□□□ 0.69
SMC4-221ENST00000489573 RUNX1T1Q06455 604 aa19.33■□□□□ 0.69
SMC4-221ENST00000489573 GGTLC2Q14390 218 aa19.33■□□□□ 0.69
SMC4-221ENST00000489573 POU4F3Q15319 338 aa19.33■□□□□ 0.69
SMC4-221ENST00000489573 BCL2A1Q16548 175 aa19.33■□□□□ 0.69
SMC4-221ENST00000489573 UBE2UQ5VVX9 321 aa19.33■□□□□ 0.69
SMC4-221ENST00000489573 OR51L1Q8NGJ5 315 aa19.33■□□□□ 0.69
SMC4-221ENST00000489573 CPNE4Q96A23 557 aaPredicted RBP19.33■□□□□ 0.69
SMC4-221ENST00000489573 ZMYND19Q96E35 227 aaPredicted RBP19.33■□□□□ 0.69
SMC4-221ENST00000489573 CRELD1Q96HD1 420 aa19.33■□□□□ 0.69
SMC4-221ENST00000489573 TSSK2Q96PF2 358 aa19.33■□□□□ 0.69
SMC4-221ENST00000489573 NDUFA13Q9P0J0 144 aa19.33■□□□□ 0.69
SMC4-221ENST00000489573 KLHL13Q9P2N7 655 aa19.33■□□□□ 0.69
SMC4-221ENST00000489573 ERGIC3Q9Y282 383 aa19.33■□□□□ 0.69
SMC4-221ENST00000489573 INMTO95050 263 aa19.32■□□□□ 0.68
SMC4-221ENST00000489573 PTHP01270 115 aa19.32■□□□□ 0.68
SMC4-221ENST00000489573 IGHA1P01876 353 aa19.32■□□□□ 0.68
SMC4-221ENST00000489573 LCKP06239 509 aa19.32■□□□□ 0.68
SMC4-221ENST00000489573 PYCR1P32322 319 aa19.32■□□□□ 0.68
SMC4-221ENST00000489573 PROKR2Q8NFJ6 384 aa19.32■□□□□ 0.68
SMC4-221ENST00000489573 OR6K6Q8NGW6 343 aa19.32■□□□□ 0.68
SMC4-221ENST00000489573 ZNRF4Q8WWF5 429 aa19.32■□□□□ 0.68
SMC4-221ENST00000489573 ALG12Q9BV10 488 aa19.32■□□□□ 0.68
SMC4-221ENST00000489573 JAM3Q9BX67 310 aa19.32■□□□□ 0.68
SMC4-221ENST00000489573 FAM192AQ9GZU8 254 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms