RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 U3KQV3 271 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 CACNA1DQ01668 2161 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 ZNF462Q96JM2 2506 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 SETD2Q9BYW2 2564 aaPredicted RBP0.6□□□□□ -2.31
UBXN4-207ENST00000471246 PTPN13Q12923 2485 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 MAST4O15021 2626 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 A0A087WZY1 265 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 TCRBV9S1A1TA0A576 114 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 A8MXQ7 604 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 H0YHG0 523 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 PLXNB1O43157 2135 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 ZNF207O43670 478 aaKnown RBP0.6□□□□□ -2.31
UBXN4-207ENST00000471246 ATP5LO75964 103 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 DIRAS1O95057 198 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 SLC25A14O95258 325 aaPredicted RBP0.6□□□□□ -2.31
UBXN4-207ENST00000471246 GAPDHP04406 335 aaKnown RBP0.6□□□□□ -2.31
UBXN4-207ENST00000471246 FOLR1P15328 257 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 STMN1P16949 149 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 GAP43P17677 238 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 HMGB2P26583 209 aaKnown RBP0.6□□□□□ -2.31
UBXN4-207ENST00000471246 IL12AP29459 219 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 CA8P35219 290 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 QARSP47897 775 aaKnown RBP0.6□□□□□ -2.31
UBXN4-207ENST00000471246 CRYBB1P53674 252 aaPredicted RBP0.6□□□□□ -2.31
UBXN4-207ENST00000471246 C1QTNF8P60827 252 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 LOXL1Q08397 574 aaPredicted RBP0.6□□□□□ -2.31
UBXN4-207ENST00000471246 NCBP1Q09161 790 aaKnown RBP0.6□□□□□ -2.31
UBXN4-207ENST00000471246 ZNF816Q0VGE8 651 aaPredicted RBP0.6□□□□□ -2.31
UBXN4-207ENST00000471246 CDC20Q12834 499 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 SRSF5Q13243 272 aaKnown RBP0.6□□□□□ -2.31
UBXN4-207ENST00000471246 SCGB2A2Q13296 93 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 C1orf61Q13536 156 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 OXA1LQ15070 435 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 DUSP7Q16829 419 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 CNIH2Q6PI25 160 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 BLOC1S2Q6QNY1 142 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 DUX4L9Q6RFH8 374 aaPredicted RBP0.6□□□□□ -2.31
UBXN4-207ENST00000471246 NTM-AS1Q6ZSK4 140 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 CCDC80Q76M96 950 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 ZNF619Q8N2I2 560 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 IPMKQ8NFU5 416 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 OR4D5Q8NGN0 318 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 OR10T2Q8NGX3 314 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 RNF139Q8WU17 664 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 GEMIN6Q8WXD5 167 aaKnown RBP0.6□□□□□ -2.31
UBXN4-207ENST00000471246 OXGR1Q96P68 337 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 TSSK3Q96PN8 268 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 SECISBP2Q96T21 854 aaKnown RBP0.6□□□□□ -2.31
UBXN4-207ENST00000471246 GPA33Q99795 319 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 RNF5Q99942 180 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 OMDQ99983 421 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 SULT4A1Q9BR01 284 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 TUBGCP2Q9BSJ2 902 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 KRT23Q9C075 422 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 LINC00597Q9H2U6 94 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 NHEJ1Q9H9Q4 299 aaPredicted RBP0.6□□□□□ -2.31
UBXN4-207ENST00000471246 LY9Q9HBG7 655 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 LAMP5Q9UJQ1 280 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 TMCO1Q9UM00 188 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 MEMO1Q9Y316 297 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 UBIAD1Q9Y5Z9 338 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 MUC6Q6W4X9 2439 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 FANCIQ9NVI1 1328 aa0.6□□□□□ -2.31
UBXN4-207ENST00000471246 ANKRD11Q6UB99 2663 aaPredicted RBP0.6□□□□□ -2.31
UBXN4-207ENST00000471246 GPR98Q8WXG9 6306 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 ABCA2Q9BZC7 2435 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 KDRP35968 1356 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 NAV2Q8IVL1 2488 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 COL6A3P12111 3177 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 IGLV3-22A0A075B6J6 115 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 IGHV3-74A0A0B4J1X5 117 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 IGKV1D-13A0A0B4J2D9 117 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 A0A1B0GVI7 797 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 CCDC182A6NF36 153 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 ZNF850A8MQ14 1090 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 MAPK13O15264 365 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 CLDN3O15551 220 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 MED7O43513 233 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 BCAS1O75363 584 aaPredicted RBP0.59□□□□□ -2.31
UBXN4-207ENST00000471246 UPK3AO75631 287 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 MFN2O95140 757 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 AK1P00568 194 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 IL4P05112 153 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 IGKV1-13P0DP09 117 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 LAP3P28838 519 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 RDXP35241 583 aaKnown RBP0.59□□□□□ -2.31
UBXN4-207ENST00000471246 ATP6V1E1P36543 226 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 NAMPTP43490 491 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 KIR3DL2P43630 455 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 CX3CR1P49238 355 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 SUB1P53999 127 aaKnown RBP eCLIP0.59□□□□□ -2.31
UBXN4-207ENST00000471246 ERVK-25P63136 954 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 PLD1Q13393 1074 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 SLC39A6Q13433 755 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 AQP6Q13520 282 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 OR5I1Q13606 314 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 GINS1Q14691 196 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 MESDQ14696 234 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 IRF4Q15306 451 aa0.59□□□□□ -2.31
UBXN4-207ENST00000471246 TAF9Q16594 264 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms