RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 OR5M1Q8NGP8 315 aa12.12□□□□□ -0.47
LINC00173-201ENST00000470091 OR51A7Q8NH64 312 aa12.12□□□□□ -0.47
LINC00173-201ENST00000470091 HDAC2Q92769 488 aaKnown RBP12.12□□□□□ -0.47
LINC00173-201ENST00000470091 TAAR8Q969N4 342 aa12.12□□□□□ -0.47
LINC00173-201ENST00000470091 MRGPRX4Q96LA9 322 aa12.12□□□□□ -0.47
LINC00173-201ENST00000470091 DACH2Q96NX9 599 aa12.12□□□□□ -0.47
LINC00173-201ENST00000470091 MOGAT1Q96PD6 335 aa12.12□□□□□ -0.47
LINC00173-201ENST00000470091 PTGES2Q9H7Z7 377 aa12.12□□□□□ -0.47
LINC00173-201ENST00000470091 DLL4Q9NR61 685 aa12.12□□□□□ -0.47
LINC00173-201ENST00000470091 IL20Q9NYY1 176 aa12.12□□□□□ -0.47
LINC00173-201ENST00000470091 TVP23BQ9NYZ1 205 aa12.12□□□□□ -0.47
LINC00173-201ENST00000470091 CLCF1Q9UBD9 225 aa12.12□□□□□ -0.47
LINC00173-201ENST00000470091 CHRNA9Q9UGM1 479 aa12.12□□□□□ -0.47
LINC00173-201ENST00000470091 NDRG3Q9UGV2 375 aa12.12□□□□□ -0.47
LINC00173-201ENST00000470091 SIGLEC7Q9Y286 467 aa12.12□□□□□ -0.47
LINC00173-201ENST00000470091 JMJD1CQ15652 2540 aa12.11□□□□□ -0.47
LINC00173-201ENST00000470091 A0A087WZY1 265 aa12.11□□□□□ -0.47
LINC00173-201ENST00000470091 A8MVM7 634 aa12.11□□□□□ -0.47
LINC00173-201ENST00000470091 A8MXE2 369 aa12.11□□□□□ -0.47
LINC00173-201ENST00000470091 SLC1A7O00341 560 aa12.11□□□□□ -0.47
LINC00173-201ENST00000470091 WBP4O75554 376 aaKnown RBP12.11□□□□□ -0.47
LINC00173-201ENST00000470091 IGF2P01344 180 aa12.11□□□□□ -0.47
LINC00173-201ENST00000470091 BGLAPP02818 100 aa12.11□□□□□ -0.47
LINC00173-201ENST00000470091 FOSL1P15407 271 aa12.11□□□□□ -0.47
LINC00173-201ENST00000470091 GABRB1P18505 474 aa12.11□□□□□ -0.47
LINC00173-201ENST00000470091 HK1P19367 917 aa12.11□□□□□ -0.47
LINC00173-201ENST00000470091 IL11P20809 199 aa12.11□□□□□ -0.47
LINC00173-201ENST00000470091 APOBEC1P41238 236 aaKnown RBP12.11□□□□□ -0.47
LINC00173-201ENST00000470091 RPS5P46782 204 aaKnown RBP12.11□□□□□ -0.47
LINC00173-201ENST00000470091 GIPRP48546 466 aa12.11□□□□□ -0.47
LINC00173-201ENST00000470091 SLC9A3P48764 834 aa12.11□□□□□ -0.47
LINC00173-201ENST00000470091 CDH15P55291 814 aa12.11□□□□□ -0.47
LINC00173-201ENST00000470091 CLDN18P56856 261 aa12.11□□□□□ -0.47
LINC00173-201ENST00000470091 LTBQ06643 244 aa12.11□□□□□ -0.47
LINC00173-201ENST00000470091 SMN1Q16637 294 aaKnown RBP12.11□□□□□ -0.47
LINC00173-201ENST00000470091 ZBED5Q49AG3 693 aa12.11□□□□□ -0.47
LINC00173-201ENST00000470091 KCTD21Q4G0X4 260 aa12.11□□□□□ -0.47
LINC00173-201ENST00000470091 C1orf140Q5VVS0 124 aa12.11□□□□□ -0.47
LINC00173-201ENST00000470091 TMEM154Q6P9G4 183 aa12.11□□□□□ -0.47
LINC00173-201ENST00000470091 PTCHD4Q6ZW05 846 aa12.11□□□□□ -0.47
LINC00173-201ENST00000470091 ATP6V1C2Q8NEY4 427 aa12.11□□□□□ -0.47
LINC00173-201ENST00000470091 RHOXF1Q8NHV9 184 aa12.11□□□□□ -0.47
LINC00173-201ENST00000470091 STK35Q8TDR2 534 aa12.11□□□□□ -0.47
LINC00173-201ENST00000470091 ZFP3Q96NJ6 502 aa12.11□□□□□ -0.47
LINC00173-201ENST00000470091 TNFRSF13CQ96RJ3 184 aa12.11□□□□□ -0.47
LINC00173-201ENST00000470091 UCN2Q96RP3 112 aa12.11□□□□□ -0.47
LINC00173-201ENST00000470091 IL4I1Q96RQ9 567 aa12.11□□□□□ -0.47
LINC00173-201ENST00000470091 PTDSS2Q9BVG9 487 aa12.11□□□□□ -0.47
LINC00173-201ENST00000470091 PIGMQ9H3S5 423 aa12.11□□□□□ -0.47
LINC00173-201ENST00000470091 ZNF337Q9Y3M9 751 aa12.11□□□□□ -0.47
LINC00173-201ENST00000470091 ARID1AO14497 2285 aa12.11□□□□□ -0.47
LINC00173-201ENST00000470091 ABCA2Q9BZC7 2435 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 A0A1W2PNV4 684 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 H0YC42 278 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 XPNPEP2O43895 674 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 PRKYO43930 277 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 NPIPB7O75200 414 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 PTP4A3O75365 173 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 TNFSF13O75888 250 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 AHSA1O95433 338 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 PPP1R3DO95685 299 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 ZNF708P17019 499 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 CD53P19397 219 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 HOXC12P31275 282 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 SLC6A6P31641 620 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 GRK5P34947 590 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 PCYT1AP49585 367 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 DSCR4P56555 118 aaPredicted RBP12.1□□□□□ -0.47
LINC00173-201ENST00000470091 SIRPAP78324 504 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 NKX6-1P78426 367 aaPredicted RBP12.1□□□□□ -0.47
LINC00173-201ENST00000470091 RBM48Q5RL73 367 aaKnown RBP12.1□□□□□ -0.47
LINC00173-201ENST00000470091 RPL13AP3Q6NVV1 102 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 NANOGNBQ7Z5D8 188 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 IGFN1Q86VF2 1251 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 TCEANCQ8N8B7 351 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 BPIFB6Q8NFQ5 453 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 OR2T33Q8NG76 320 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 MOSPD2Q8NHP6 518 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 ZBTB8AQ96BR9 441 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 STARD4Q96DR4 205 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 WFIKKN1Q96NZ8 548 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 IFT27Q9BW83 186 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 YTHDF1Q9BYJ9 559 aaKnown RBP12.1□□□□□ -0.47
LINC00173-201ENST00000470091 TMEM185BQ9H7F4 350 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 FKRPQ9H9S5 495 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 DNAJC27Q9NZQ0 273 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 SCOCQ9UIL1 159 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 MRPS18CQ9Y3D5 142 aaKnown RBP12.1□□□□□ -0.47
LINC00173-201ENST00000470091 ROS1P08922 2347 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 ZANQ9Y493 2812 aa12.1□□□□□ -0.47
LINC00173-201ENST00000470091 HTR3EA5X5Y0 456 aa12.09□□□□□ -0.47
LINC00173-201ENST00000470091 SLC22A20A6NK97 555 aa12.09□□□□□ -0.47
LINC00173-201ENST00000470091 H3BML4 177 aa12.09□□□□□ -0.47
LINC00173-201ENST00000470091 BHLHE40O14503 412 aa12.09□□□□□ -0.47
LINC00173-201ENST00000470091 SEC14L5O43304 696 aa12.09□□□□□ -0.47
LINC00173-201ENST00000470091 EFNA2O43921 213 aa12.09□□□□□ -0.47
LINC00173-201ENST00000470091 FAM20BO75063 409 aa12.09□□□□□ -0.47
LINC00173-201ENST00000470091 NDUFB2O95178 105 aa12.09□□□□□ -0.47
LINC00173-201ENST00000470091 ASAH2BP0C7U1 165 aa12.09□□□□□ -0.47
LINC00173-201ENST00000470091 PEPDP12955 493 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms