RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 ERVK-25P63136 954 aa2.44□□□□□ -2.02
TRAPPC13-204ENST00000438419 RCN1Q15293 331 aa2.44□□□□□ -2.02
TRAPPC13-204ENST00000438419 CYTH1Q15438 398 aa2.44□□□□□ -2.02
TRAPPC13-204ENST00000438419 ARMC12Q5T9G4 340 aa2.44□□□□□ -2.02
TRAPPC13-204ENST00000438419 PRAMEF20Q5VT98 475 aa2.44□□□□□ -2.02
TRAPPC13-204ENST00000438419 Q6ZVH6 145 aa2.44□□□□□ -2.02
TRAPPC13-204ENST00000438419 NIPA1Q7RTP0 329 aa2.44□□□□□ -2.02
TRAPPC13-204ENST00000438419 ASCL5Q7RTU5 278 aa2.44□□□□□ -2.02
TRAPPC13-204ENST00000438419 TTC5Q8N0Z6 440 aa2.44□□□□□ -2.02
TRAPPC13-204ENST00000438419 RAB3IL1Q8TBN0 382 aa2.44□□□□□ -2.02
TRAPPC13-204ENST00000438419 RNF138Q8WVD3 245 aa2.44□□□□□ -2.02
TRAPPC13-204ENST00000438419 ACOT11Q8WXI4 607 aaPredicted RBP2.44□□□□□ -2.02
TRAPPC13-204ENST00000438419 NDRG1Q92597 394 aaKnown RBP2.44□□□□□ -2.02
TRAPPC13-204ENST00000438419 MED8Q96G25 268 aa2.44□□□□□ -2.02
TRAPPC13-204ENST00000438419 CENPKQ9BS16 269 aa2.44□□□□□ -2.02
TRAPPC13-204ENST00000438419 CALYQ9NYX4 217 aa2.44□□□□□ -2.02
TRAPPC13-204ENST00000438419 CTNNA3Q9UI47 895 aa2.44□□□□□ -2.02
TRAPPC13-204ENST00000438419 NEUROG3Q9Y4Z2 214 aa2.44□□□□□ -2.02
TRAPPC13-204ENST00000438419 ZNFX1Q9P2E3 1918 aaKnown RBP2.44□□□□□ -2.02
TRAPPC13-204ENST00000438419 PCF11O94913 1555 aaKnown RBP2.44□□□□□ -2.02
TRAPPC13-204ENST00000438419 IGKV6D-21A0A0A0MT36 114 aa2.43□□□□□ -2.02
TRAPPC13-204ENST00000438419 GJE1A6NN92 205 aa2.43□□□□□ -2.02
TRAPPC13-204ENST00000438419 C12orf71A8MTZ7 269 aa2.43□□□□□ -2.02
TRAPPC13-204ENST00000438419 SGK1O00141 431 aa2.43□□□□□ -2.02
TRAPPC13-204ENST00000438419 CCL21O00585 134 aa2.43□□□□□ -2.02
TRAPPC13-204ENST00000438419 INSP01308 110 aa2.43□□□□□ -2.02
TRAPPC13-204ENST00000438419 ALDOBP05062 364 aa2.43□□□□□ -2.02
TRAPPC13-204ENST00000438419 MDKP21741 143 aaPredicted RBP2.43□□□□□ -2.02
TRAPPC13-204ENST00000438419 VHLP40337 213 aa2.43□□□□□ -2.02
TRAPPC13-204ENST00000438419 YAP1P46937 504 aaKnown RBP2.43□□□□□ -2.02
TRAPPC13-204ENST00000438419 PRMT2P55345 433 aa2.43□□□□□ -2.02
TRAPPC13-204ENST00000438419 NUP107P57740 925 aa2.43□□□□□ -2.02
TRAPPC13-204ENST00000438419 TGM3Q08188 693 aa2.43□□□□□ -2.02
TRAPPC13-204ENST00000438419 SRSF5Q13243 272 aaKnown RBP2.43□□□□□ -2.02
TRAPPC13-204ENST00000438419 CASC10Q5T4H9 136 aa2.43□□□□□ -2.02
TRAPPC13-204ENST00000438419 PUSL1Q8N0Z8 303 aaKnown RBP2.43□□□□□ -2.02
TRAPPC13-204ENST00000438419 BBS5Q8N3I7 341 aa2.43□□□□□ -2.02
TRAPPC13-204ENST00000438419 CEP112Q8N8E3 955 aa2.43□□□□□ -2.02
TRAPPC13-204ENST00000438419 SUMF2Q8NBJ7 301 aa2.43□□□□□ -2.02
TRAPPC13-204ENST00000438419 SPATA4Q8NEY3 305 aa2.43□□□□□ -2.02
TRAPPC13-204ENST00000438419 SLC22A8Q8TCC7 542 aa2.43□□□□□ -2.02
TRAPPC13-204ENST00000438419 SDHCQ99643 169 aaPredicted RBP2.43□□□□□ -2.02
TRAPPC13-204ENST00000438419 RIOK2Q9BVS4 552 aaKnown RBP2.43□□□□□ -2.02
TRAPPC13-204ENST00000438419 SRMSQ9H3Y6 488 aa2.43□□□□□ -2.02
TRAPPC13-204ENST00000438419 INPP5EQ9NRR6 644 aa2.43□□□□□ -2.02
TRAPPC13-204ENST00000438419 NUP50Q9UKX7 468 aa2.43□□□□□ -2.02
TRAPPC13-204ENST00000438419 STARD10Q9Y365 291 aa2.43□□□□□ -2.02
TRAPPC13-204ENST00000438419 ARHGAP21Q5T5U3 1957 aa2.43□□□□□ -2.02
TRAPPC13-204ENST00000438419 NCAPD3P42695 1498 aa2.43□□□□□ -2.02
TRAPPC13-204ENST00000438419 SNAPC4Q5SXM2 1469 aa2.43□□□□□ -2.02
TRAPPC13-204ENST00000438419 CDHR2Q9BYE9 1310 aa2.43□□□□□ -2.02
TRAPPC13-204ENST00000438419 DYNC1I1O14576 645 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 TRAF3IP2O43734 574 aaPredicted RBP2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 MGRN1O60291 552 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 FAM189A1O60320 539 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 DFNA5O60443 496 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 MOSP00540 346 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 IGHV2-5P01817 119 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 FGF1P05230 155 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 C2P06681 752 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 CRYGBP07316 175 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 PABPC4LP0CB38 370 aaKnown RBP2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 SH3BGRP55822 239 aaPredicted RBP2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 FBXW4P57775 412 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 CCNA1P78396 465 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 REG3AQ06141 175 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 DAZ2Q13117 558 aaKnown RBP2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 UNC119Q13432 240 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 KIAA0087Q14695 138 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 VPS26BQ4G0F5 336 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 ZNF658BQ4V348 819 aaPredicted RBP2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 XKR7Q5GH72 579 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 CTRB2Q6GPI1 263 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 SLC8B1Q6J4K2 584 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 LCN12Q6JVE5 192 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 C6orf89Q6UWU4 347 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 ZNF836Q6ZNA1 936 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 ZNF557Q8N988 423 aaPredicted RBP2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 CCDC54Q8NEL0 328 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 B3GNT7Q8NFL0 401 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 PLPPR1Q8TBJ4 325 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 ACER1Q8TDN7 264 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 FGF14Q92915 247 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 RARRES2Q99969 163 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 NRIP2Q9BQI9 281 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 OR11A1Q9GZK7 315 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 CLMPQ9H6B4 373 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 RANBP3Q9H6Z4 567 aaPredicted RBP2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 VPS37BQ9H9H4 285 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 DAZ3Q9NR90 486 aaKnown RBP2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 MMP26Q9NRE1 261 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 CCL28Q9NRJ3 127 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 GLRX2Q9NS18 164 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 CLCF1Q9UBD9 225 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 ZNF608Q9ULD9 1512 aaPredicted RBP2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 MSH6P52701 1360 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 LTBP4Q8N2S1 1624 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 TSPOAP1O95153 1857 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 SMCO3A2RU48 225 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 OR2AG2A6NM03 316 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms