RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 SCAIQ8N9R8 606 aa23.19■■□□□ 1.3
CPNE1-216ENST00000437340 NLGN4YQ8NFZ3 816 aaPredicted RBP23.19■■□□□ 1.3
CPNE1-216ENST00000437340 ZNF417Q8TAU3 575 aa23.19■■□□□ 1.3
CPNE1-216ENST00000437340 DDIT4LQ96D03 193 aa23.19■■□□□ 1.3
CPNE1-216ENST00000437340 MRGPRX4Q96LA9 322 aa23.19■■□□□ 1.3
CPNE1-216ENST00000437340 ZNF587Q96SQ5 575 aaPredicted RBP23.19■■□□□ 1.3
CPNE1-216ENST00000437340 SYT4Q9H2B2 425 aa23.19■■□□□ 1.3
CPNE1-216ENST00000437340 PPIL3Q9H2H8 161 aaKnown RBP23.19■■□□□ 1.3
CPNE1-216ENST00000437340 ACOXLQ9NUZ1 547 aa23.19■■□□□ 1.3
CPNE1-216ENST00000437340 VSX1Q9NZR4 365 aaPredicted RBP23.19■■□□□ 1.3
CPNE1-216ENST00000437340 COMMD3Q9UBI1 195 aa23.19■■□□□ 1.3
CPNE1-216ENST00000437340 PRSS37A4D1T9 235 aa23.18■■□□□ 1.3
CPNE1-216ENST00000437340 H7C1C5 153 aa23.18■■□□□ 1.3
CPNE1-216ENST00000437340 CD63P08962 238 aa23.18■■□□□ 1.3
CPNE1-216ENST00000437340 PTBP1P26599 531 aaKnown RBP eCLIP23.18■■□□□ 1.3
CPNE1-216ENST00000437340 ZNF41P51814 821 aaPredicted RBP23.18■■□□□ 1.3
CPNE1-216ENST00000437340 LCN6P62502 163 aa23.18■■□□□ 1.3
CPNE1-216ENST00000437340 ZP4Q12836 540 aa23.18■■□□□ 1.3
CPNE1-216ENST00000437340 AGAP7PQ5VUJ5 663 aa23.18■■□□□ 1.3
CPNE1-216ENST00000437340 BICRALQ6AI39 1079 aa23.18■■□□□ 1.3
CPNE1-216ENST00000437340 ARSKQ6UWY0 536 aa23.18■■□□□ 1.3
CPNE1-216ENST00000437340 M1APQ8TC57 530 aa23.18■■□□□ 1.3
CPNE1-216ENST00000437340 PHYHIPQ92561 330 aa23.18■■□□□ 1.3
CPNE1-216ENST00000437340 PMEPA1Q969W9 287 aa23.18■■□□□ 1.3
CPNE1-216ENST00000437340 POTEKPQ9BYX7 375 aa23.18■■□□□ 1.3
CPNE1-216ENST00000437340 TMEM14AQ9Y6G1 99 aa23.18■■□□□ 1.3
CPNE1-216ENST00000437340 TRAV1-2A0A0B4J238 106 aa23.17■■□□□ 1.3
CPNE1-216ENST00000437340 TRBV2A0A0J9YWF9 115 aa23.17■■□□□ 1.3
CPNE1-216ENST00000437340 TP53I11O14683 189 aa23.17■■□□□ 1.3
CPNE1-216ENST00000437340 COX6A1P12074 109 aa23.17■■□□□ 1.3
CPNE1-216ENST00000437340 EDNRAP25101 427 aa23.17■■□□□ 1.3
CPNE1-216ENST00000437340 BLVRAP53004 296 aa23.17■■□□□ 1.3
CPNE1-216ENST00000437340 ZMAT1Q5H9K5 638 aa23.17■■□□□ 1.3
CPNE1-216ENST00000437340 TRILQ7L0X0 811 aa23.17■■□□□ 1.3
CPNE1-216ENST00000437340 PM20D2Q8IYS1 436 aa23.17■■□□□ 1.3
CPNE1-216ENST00000437340 OR8H2Q8N162 312 aa23.17■■□□□ 1.3
CPNE1-216ENST00000437340 ZNF248Q8NDW4 579 aa23.17■■□□□ 1.3
CPNE1-216ENST00000437340 DNAJA3Q96EY1 480 aa23.17■■□□□ 1.3
CPNE1-216ENST00000437340 TTYH2Q9BSA4 534 aa23.17■■□□□ 1.3
CPNE1-216ENST00000437340 WDR76Q9H967 626 aa23.17■■□□□ 1.3
CPNE1-216ENST00000437340 ADAM30Q9UKF2 790 aa23.17■■□□□ 1.3
CPNE1-216ENST00000437340 A0A1W2PRG6 482 aa23.17■■□□□ 1.3
CPNE1-216ENST00000437340 ARL6IP5O75915 188 aa23.17■■□□□ 1.3
CPNE1-216ENST00000437340 FOXF1Q12946 379 aa23.17■■□□□ 1.3
CPNE1-216ENST00000437340 KIF26BQ2KJY2 2108 aa23.17■■□□□ 1.3
CPNE1-216ENST00000437340 SNRNP27Q8WVK2 155 aaKnown RBP23.17■■□□□ 1.3
CPNE1-216ENST00000437340 ADAD1Q96M93 576 aaKnown RBP23.17■■□□□ 1.3
CPNE1-216ENST00000437340 KLHL15Q96M94 604 aa23.17■■□□□ 1.3
CPNE1-216ENST00000437340 MFRPQ9BY79 579 aa23.17■■□□□ 1.3
CPNE1-216ENST00000437340 C14orf119Q9NWQ9 140 aa23.17■■□□□ 1.3
CPNE1-216ENST00000437340 VDAC3Q9Y277 283 aa23.17■■□□□ 1.3
CPNE1-216ENST00000437340 CUL9Q8IWT3 2517 aa23.16■■□□□ 1.3
CPNE1-216ENST00000437340 PHYHO14832 338 aa23.16■■□□□ 1.3
CPNE1-216ENST00000437340 SLC19A2O60779 497 aa23.16■■□□□ 1.3
CPNE1-216ENST00000437340 LRP3O75074 770 aa23.16■■□□□ 1.3
CPNE1-216ENST00000437340 NBL1P41271 181 aa23.16■■□□□ 1.3
CPNE1-216ENST00000437340 CASP3P42574 277 aa23.16■■□□□ 1.3
CPNE1-216ENST00000437340 PUDPQ08623 228 aa23.16■■□□□ 1.3
CPNE1-216ENST00000437340 SNTA1Q13424 505 aa23.16■■□□□ 1.3
CPNE1-216ENST00000437340 FAM220AQ7Z4H9 259 aa23.16■■□□□ 1.3
CPNE1-216ENST00000437340 NR2C2APQ86WQ0 139 aa23.16■■□□□ 1.3
CPNE1-216ENST00000437340 NXPE2Q96DL1 559 aa23.16■■□□□ 1.3
CPNE1-216ENST00000437340 INTS14Q96SY0 518 aa23.16■■□□□ 1.3
CPNE1-216ENST00000437340 NPAS1Q99742 590 aa23.16■■□□□ 1.3
CPNE1-216ENST00000437340 SOSTQ9BQB4 213 aa23.16■■□□□ 1.3
CPNE1-216ENST00000437340 HS3ST3B1Q9Y662 390 aa23.16■■□□□ 1.3
CPNE1-216ENST00000437340 A0A1W2PQ72 361 aa23.15■■□□□ 1.3
CPNE1-216ENST00000437340 NPIPB13A6NJU9 1138 aa23.15■■□□□ 1.3
CPNE1-216ENST00000437340 NPIPB4C9JG80 1138 aa23.15■■□□□ 1.3
CPNE1-216ENST00000437340 ITGA10O75578 1167 aa23.15■■□□□ 1.3
CPNE1-216ENST00000437340 IGHEP01854 428 aa23.15■■□□□ 1.3
CPNE1-216ENST00000437340 APOA1P02647 267 aa23.15■■□□□ 1.3
CPNE1-216ENST00000437340 EGR3Q06889 387 aa23.15■■□□□ 1.3
CPNE1-216ENST00000437340 PLPPR5Q32ZL2 321 aa23.15■■□□□ 1.3
CPNE1-216ENST00000437340 DCAF12Q5T6F0 453 aa23.15■■□□□ 1.3
CPNE1-216ENST00000437340 TMEM81Q6P7N7 255 aa23.15■■□□□ 1.3
CPNE1-216ENST00000437340 H1FNTQ75WM6 255 aaPredicted RBP23.15■■□□□ 1.3
CPNE1-216ENST00000437340 RYDENQ9NUL5 291 aaKnown RBP23.15■■□□□ 1.3
CPNE1-216ENST00000437340 LAMP5Q9UJQ1 280 aa23.15■■□□□ 1.3
CPNE1-216ENST00000437340 B9D1Q9UPM9 204 aa23.15■■□□□ 1.3
CPNE1-216ENST00000437340 HSPB2A8KAH6 182 aa23.14■■□□□ 1.3
CPNE1-216ENST00000437340 FZD7O75084 574 aa23.14■■□□□ 1.3
CPNE1-216ENST00000437340 PLGP00747 810 aaPredicted RBP23.14■■□□□ 1.3
CPNE1-216ENST00000437340 FOLR3P41439 243 aa23.14■■□□□ 1.3
CPNE1-216ENST00000437340 EVX1P49640 407 aa23.14■■□□□ 1.3
CPNE1-216ENST00000437340 RPS11P62280 158 aaKnown RBP eCLIP23.14■■□□□ 1.3
CPNE1-216ENST00000437340 HSPB2Q16082 182 aa23.14■■□□□ 1.3
CPNE1-216ENST00000437340 CCDC157Q569K6 752 aa23.14■■□□□ 1.3
CPNE1-216ENST00000437340 FAM27D1Q5T7N8 215 aa23.14■■□□□ 1.3
CPNE1-216ENST00000437340 UNQ9370/PRO34162Q6UXP9 181 aa23.14■■□□□ 1.3
CPNE1-216ENST00000437340 CCDC86Q9H6F5 360 aaKnown RBP23.14■■□□□ 1.3
CPNE1-216ENST00000437340 MUC6Q6W4X9 2439 aa23.14■■□□□ 1.3
CPNE1-216ENST00000437340 TVP23AA6NH52 213 aa23.14■■□□□ 1.29
CPNE1-216ENST00000437340 PRR32B1ATL7 298 aa23.14■■□□□ 1.29
CPNE1-216ENST00000437340 HPGDSO60760 199 aa23.14■■□□□ 1.29
CPNE1-216ENST00000437340 TMCC2O75069 709 aa23.14■■□□□ 1.29
CPNE1-216ENST00000437340 UCHL1P09936 223 aa23.14■■□□□ 1.29
CPNE1-216ENST00000437340 IL7P13232 177 aa23.14■■□□□ 1.29
CPNE1-216ENST00000437340 ALOX5APP20292 161 aa23.14■■□□□ 1.29
CPNE1-216ENST00000437340 BAK1Q16611 211 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms