RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 ADAD1Q96M93 576 aaKnown RBP17.52■□□□□ 0.39
HOXC4-201ENST00000303406 FRMD6Q96NE9 622 aa17.52■□□□□ 0.39
HOXC4-201ENST00000303406 TSSK2Q96PF2 358 aa17.52■□□□□ 0.39
HOXC4-201ENST00000303406 OR11A1Q9GZK7 315 aa17.52■□□□□ 0.39
HOXC4-201ENST00000303406 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.52■□□□□ 0.39
HOXC4-201ENST00000303406 SYT4Q9H2B2 425 aa17.52■□□□□ 0.39
HOXC4-201ENST00000303406 ARRDC1-AS1Q9H2J1 176 aa17.52■□□□□ 0.39
HOXC4-201ENST00000303406 ZCCHC4Q9H5U6 513 aa17.52■□□□□ 0.39
HOXC4-201ENST00000303406 POLE4Q9NR33 117 aa17.52■□□□□ 0.39
HOXC4-201ENST00000303406 RHBDL2Q9NX52 303 aa17.52■□□□□ 0.39
HOXC4-201ENST00000303406 COMMD3Q9UBI1 195 aa17.52■□□□□ 0.39
HOXC4-201ENST00000303406 B9D1Q9UPM9 204 aa17.52■□□□□ 0.39
HOXC4-201ENST00000303406 FAM47E-STBD1D6RA91 191 aa17.51■□□□□ 0.39
HOXC4-201ENST00000303406 C11orf98E9PRG8 122 aa17.51■□□□□ 0.39
HOXC4-201ENST00000303406 DVL2O14641 736 aa17.51■□□□□ 0.39
HOXC4-201ENST00000303406 GDF9O60383 454 aa17.51■□□□□ 0.39
HOXC4-201ENST00000303406 ABHD16AO95870 558 aa17.51■□□□□ 0.39
HOXC4-201ENST00000303406 CASP3P42574 277 aa17.51■□□□□ 0.39
HOXC4-201ENST00000303406 EVX1P49640 407 aa17.51■□□□□ 0.39
HOXC4-201ENST00000303406 RPS11P62280 158 aaKnown RBP eCLIP17.51■□□□□ 0.39
HOXC4-201ENST00000303406 YIF1BQ5BJH7 314 aa17.51■□□□□ 0.39
HOXC4-201ENST00000303406 PLA2G2CQ5R387 149 aa17.51■□□□□ 0.39
HOXC4-201ENST00000303406 FAM199XQ6PEV8 388 aaPredicted RBP17.51■□□□□ 0.39
HOXC4-201ENST00000303406 H1FNTQ75WM6 255 aaPredicted RBP17.51■□□□□ 0.39
HOXC4-201ENST00000303406 PM20D2Q8IYS1 436 aa17.51■□□□□ 0.39
HOXC4-201ENST00000303406 OR8H2Q8N162 312 aa17.51■□□□□ 0.39
HOXC4-201ENST00000303406 ARMC10Q8N2F6 343 aa17.51■□□□□ 0.39
HOXC4-201ENST00000303406 FADS6Q8N9I5 356 aa17.51■□□□□ 0.39
HOXC4-201ENST00000303406 OR2M3Q8NG83 312 aa17.51■□□□□ 0.39
HOXC4-201ENST00000303406 PPIL3Q9H2H8 161 aaKnown RBP17.51■□□□□ 0.39
HOXC4-201ENST00000303406 SERINC1Q9NRX5 453 aa17.51■□□□□ 0.39
HOXC4-201ENST00000303406 ALKBH4Q9NXW9 302 aa17.51■□□□□ 0.39
HOXC4-201ENST00000303406 ZNF281Q9Y2X9 895 aa17.51■□□□□ 0.39
HOXC4-201ENST00000303406 HS3ST3B1Q9Y662 390 aa17.51■□□□□ 0.39
HOXC4-201ENST00000303406 A0A0G2JK05 382 aa17.5■□□□□ 0.39
HOXC4-201ENST00000303406 FAM171A2A8MVW0 826 aa17.5■□□□□ 0.39
HOXC4-201ENST00000303406 CENPBD1B2RD01 187 aa17.5■□□□□ 0.39
HOXC4-201ENST00000303406 NCR1O76036 304 aa17.5■□□□□ 0.39
HOXC4-201ENST00000303406 KRT8P05787 483 aa17.5■□□□□ 0.39
HOXC4-201ENST00000303406 IL7P13232 177 aa17.5■□□□□ 0.39
HOXC4-201ENST00000303406 ALOX5APP20292 161 aa17.5■□□□□ 0.39
HOXC4-201ENST00000303406 ADH6P28332 368 aa17.5■□□□□ 0.39
HOXC4-201ENST00000303406 FOLR3P41439 243 aa17.5■□□□□ 0.39
HOXC4-201ENST00000303406 DAP3P51398 398 aaKnown RBP17.5■□□□□ 0.39
HOXC4-201ENST00000303406 SCN1BQ07699 218 aa17.5■□□□□ 0.39
HOXC4-201ENST00000303406 PUDPQ08623 228 aa17.5■□□□□ 0.39
HOXC4-201ENST00000303406 LPAL2Q16609 132 aa17.5■□□□□ 0.39
HOXC4-201ENST00000303406 DCAF12Q5T6F0 453 aa17.5■□□□□ 0.39
HOXC4-201ENST00000303406 OR5M10Q6IEU7 315 aa17.5■□□□□ 0.39
HOXC4-201ENST00000303406 SFXN4Q6P4A7 337 aa17.5■□□□□ 0.39
HOXC4-201ENST00000303406 LYPD4Q6UWN0 246 aa17.5■□□□□ 0.39
HOXC4-201ENST00000303406 ARSKQ6UWY0 536 aa17.5■□□□□ 0.39
HOXC4-201ENST00000303406 ATOH1Q92858 354 aaPredicted RBP17.5■□□□□ 0.39
HOXC4-201ENST00000303406 NTNG2Q96CW9 530 aa17.5■□□□□ 0.39
HOXC4-201ENST00000303406 NXPE2Q96DL1 559 aa17.5■□□□□ 0.39
HOXC4-201ENST00000303406 STRADBQ9C0K7 418 aa17.5■□□□□ 0.39
HOXC4-201ENST00000303406 SMOC1Q9H4F8 434 aa17.5■□□□□ 0.39
HOXC4-201ENST00000303406 PPP1R3EQ9H7J1 279 aa17.5■□□□□ 0.39
HOXC4-201ENST00000303406 CHST11Q9NPF2 352 aa17.5■□□□□ 0.39
HOXC4-201ENST00000303406 LAMP5Q9UJQ1 280 aa17.5■□□□□ 0.39
HOXC4-201ENST00000303406 IGLV1-36A0A0B4J1U3 117 aa17.49■□□□□ 0.39
HOXC4-201ENST00000303406 SLC22A23A1A5C7 686 aa17.49■□□□□ 0.39
HOXC4-201ENST00000303406 SMIM30A4D0T7 59 aa17.49■□□□□ 0.39
HOXC4-201ENST00000303406 C2orf72A6NCS6 295 aa17.49■□□□□ 0.39
HOXC4-201ENST00000303406 H7C1C5 153 aa17.49■□□□□ 0.39
HOXC4-201ENST00000303406 HPGDSO60760 199 aa17.49■□□□□ 0.39
HOXC4-201ENST00000303406 UPK3AO75631 287 aa17.49■□□□□ 0.39
HOXC4-201ENST00000303406 AHCYP23526 432 aa17.49■□□□□ 0.39
HOXC4-201ENST00000303406 CRABP1P29762 137 aa17.49■□□□□ 0.39
HOXC4-201ENST00000303406 THBS2P35442 1172 aa17.49■□□□□ 0.39
HOXC4-201ENST00000303406 LCN6P62502 163 aa17.49■□□□□ 0.39
HOXC4-201ENST00000303406 ANGPT1Q15389 498 aa17.49■□□□□ 0.39
HOXC4-201ENST00000303406 CNIH2Q6PI25 160 aa17.49■□□□□ 0.39
HOXC4-201ENST00000303406 NDUFAF7Q7L592 441 aa17.49■□□□□ 0.39
HOXC4-201ENST00000303406 NR2C2APQ86WQ0 139 aa17.49■□□□□ 0.39
HOXC4-201ENST00000303406 NLGN4YQ8NFZ3 816 aaPredicted RBP17.49■□□□□ 0.39
HOXC4-201ENST00000303406 ASB17Q8WXJ9 295 aa17.49■□□□□ 0.39
HOXC4-201ENST00000303406 PMEPA1Q969W9 287 aa17.49■□□□□ 0.39
HOXC4-201ENST00000303406 RNF166Q96A37 237 aaPredicted RBP17.49■□□□□ 0.39
HOXC4-201ENST00000303406 TTTY10Q9BZA0 68 aa17.49■□□□□ 0.39
HOXC4-201ENST00000303406 MRM2Q9UI43 246 aaKnown RBP17.49■□□□□ 0.39
HOXC4-201ENST00000303406 TBC1D24Q9ULP9 559 aa17.49■□□□□ 0.39
HOXC4-201ENST00000303406 B3GALT5Q9Y2C3 310 aa17.49■□□□□ 0.39
HOXC4-201ENST00000303406 CHCHD2Q9Y6H1 151 aaPredicted RBP17.49■□□□□ 0.39
HOXC4-201ENST00000303406 PCNX3Q9H6A9 2034 aa17.49■□□□□ 0.39
HOXC4-201ENST00000303406 A0A087WZY1 265 aa17.48■□□□□ 0.39
HOXC4-201ENST00000303406 A0A1W2PNV4 684 aa17.48■□□□□ 0.39
HOXC4-201ENST00000303406 LIPT2A6NK58 231 aa17.48■□□□□ 0.39
HOXC4-201ENST00000303406 PRR32B1ATL7 298 aa17.48■□□□□ 0.39
HOXC4-201ENST00000303406 ZNF879B4DU55 563 aa17.48■□□□□ 0.39
HOXC4-201ENST00000303406 MS4A18H0YCH9 400 aa17.48■□□□□ 0.39
HOXC4-201ENST00000303406 MAGEB4O15481 346 aaPredicted RBP17.48■□□□□ 0.39
HOXC4-201ENST00000303406 TMCC2O75069 709 aa17.48■□□□□ 0.39
HOXC4-201ENST00000303406 ITGA10O75578 1167 aa17.48■□□□□ 0.39
HOXC4-201ENST00000303406 AKR7A3O95154 331 aa17.48■□□□□ 0.39
HOXC4-201ENST00000303406 DLGAP3O95886 979 aa17.48■□□□□ 0.39
HOXC4-201ENST00000303406 HLA-DQB1P01920 261 aa17.48■□□□□ 0.39
HOXC4-201ENST00000303406 HNRNPCP07910 306 aaKnown RBP eCLIP17.48■□□□□ 0.39
HOXC4-201ENST00000303406 RAB40ALP0C0E4 278 aa17.48■□□□□ 0.39
HOXC4-201ENST00000303406 RAB3BP20337 219 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms