RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Cpsf6Q6NVF9 551 aaKnown RBP9□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Fndc3bQ6NWW9 1207 aaKnown RBP9□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Cypt4Q6P925 153 aa9□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Olfr23Q7TRX4 325 aa9□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Ppp1r14dQ7TT52 146 aa9□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Sra1Q80VJ2 232 aa9□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Paqr7Q80ZE4 345 aa9□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Cst13Q80ZN5 141 aa9□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 OacylQ8BML2 685 aa9□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Lcmt2Q8BYR1 686 aa9□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 EfhbQ8CDU5 853 aa9□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Tubg2Q8VCK3 451 aa9□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Olfr96Q8VFE3 313 aa9□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 KmoQ91WN4 479 aa9□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Alg14Q9D081 217 aa9□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 5330417H12RikQ9D3P2 110 aa9□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Q9D8N1 392 aa9□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Bola1Q9D8S9 137 aaKnown RBP9□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Slco1b2Q9JJL3 689 aa9□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Rab25Q9WTL2 213 aa9□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Angpt4Q9WVH6 509 aa9□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Trbv2A0A0B4J1G8 114 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Tcrg-V4A0A0B4J1J8 138 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Ndor1A2AI05 598 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Olfr1107A2AVB8 312 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Ifi207E9Q3L4 978 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Nr1h5E9Q5A6 505 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Gm4778L7N229 365 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Cyp1a1P00184 524 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 PipP02816 146 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 GhrhrP32082 423 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Oaz1P54369 227 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 HgsnatQ3UDW8 656 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Gal3st2cQ3ULK5 396 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Zbtb2Q3V3W4 514 aaKnown RBP8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Sema3cQ62181 751 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Armcx2Q6A058 784 aaKnown RBP8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Adam20Q7M763 760 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Lrp10Q7TQH7 713 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Olfr1126Q7TR49 314 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Ankrd9Q8BH83 326 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 PpcdcQ8BZB2 204 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Plcxd1Q8CHS4 345 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Ubac2Q8R1K1 345 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Aqp3Q8R2N1 292 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 CpzQ8R4V4 654 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Olfr849Q8VFF6 312 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Olfr1497Q8VG11 314 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Mrgprb5Q91ZB9 322 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Mrpl18Q9CQL5 180 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Rpl34Q9D1R9 117 aaKnown RBP8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Slamf8Q9D3G2 278 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Cldn23Q9D7D7 296 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Slc34a2Q9DBP0 697 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Zfp869Q9DC47 529 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Gm11214V9GX06 183 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Tmem156A0A1D5RLR8 321 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 4932443I19RikA0A286YE38 169 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Nlrp1bA1Z198 1177 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Olfr1109A2AT96 312 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Cd209fD3Z1H5 274 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Gm6882J3KMT3 313 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Hax1O35387 280 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 IfngP01580 155 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Ggta1P23336 394 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 IapP24822 559 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Mc4rP56450 332 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Doc2bP70169 412 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Serac1Q3U213 654 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Rnft2Q3UF64 445 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Nr2c1Q505F1 590 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 HadhQ61425 314 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Ecm1Q61508 559 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Ccdc36Q6PDM4 574 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Inca1Q6PKN7 231 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Uhrf2Q7TMI3 803 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Olfr1216Q7TR05 311 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Nob1Q8BW10 403 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Hist3h2bbQ8CGP0 126 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Defb15Q8R2I5 79 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Olfr46Q8VGJ4 318 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Olfr569Q8VGZ2 314 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Q91W34 466 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Hist3h2baQ9D2U9 126 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Nox4Q9JHI8 578 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 ClnkQ9QZE2 435 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Esp22A8R0V4 111 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Olfr631F8VPJ9 319 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Man2b1O09159 1013 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Crisp2P16563 243 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 S100a8P27005 89 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Mmp9P41245 730 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 OcmP51879 109 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Eif5aP63242 154 aaKnown RBP8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 VaspP70460 375 aaKnown RBP8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 MakQ04859 622 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Vmn1r236Q05A06 334 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 ptchd1Q14B62 888 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 Slc35f3Q1LZI2 421 aa8.99□□□□□ -0.97
Hmgb1-201ENSMUST00000085546 SvipQ3UZP4 77 aa8.99□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 39 ms