RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Mettl7a2Q5I0W6 244 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Vmn1r196Q5SVD5 301 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Il17fQ7TNI7 161 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Olfr1344Q7TQV3 321 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 SargQ8BI29 606 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 DpcdQ8BPA8 203 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 AcppQ8CE08 381 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Dus3lQ91XI1 637 aaKnown RBP9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Egln2Q91YE2 419 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Ctrb1Q9CR35 263 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Q9D1K7 174 aaKnown RBP9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Cml5Q9QXS8 227 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 PhipQ8VDD9 1821 aaKnown RBP9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Zfp352A2AML7 551 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Gm13102A2ASJ3 519 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Zfp40B1B1D3 796 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Amy2P00688 508 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Il6P08505 211 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Prkar1bP12849 381 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Foxa1P35582 468 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Ybx1P62960 322 aaKnown RBP9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 CpeQ00493 476 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Tmem104Q3TB48 496 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Slc47a2Q3V050 573 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Olig3Q6PFG8 273 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Camk2dQ6PHZ2 499 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Mgat4aQ812G0 535 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Pom121Q8K3Z9 1200 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Olfr1309Q8VF83 320 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Hemk1Q921L7 340 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Cdca3Q99M54 266 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Cadm3Q99N28 396 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Tsga8Q9JJL0 238 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Tox2A2A472 547 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Pcdh1F7BJK1 1077 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 P01648 108 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Jmjd7P0C872 316 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Cntn1P12960 1020 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Klk1b9P15949 261 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Rfx3P48381 749 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Mfsd12Q3U481 476 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 CrxosQ3UL53 246 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Sqstm1Q64337 442 aaKnown RBP9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 HeltQ7TS99 240 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Clec9aQ8BRU4 238 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 TiparpQ8C1B2 657 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Rad51ap1Q8C551 337 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Vmn1r229Q8R2A9 306 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Olfr1261Q8VFB0 306 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Olfr658Q8VGV5 323 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Socs7Q8VHQ2 579 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 WacQ924H7 646 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Slco1a6Q99J94 670 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Zbtb8aQ9CWH1 434 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Ssna1Q9JJ94 119 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Serinc1Q9QZI8 453 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Ak4Q9WUR9 223 aaKnown RBP9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Cpne6Q9Z140 557 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 A0A286YDP4 300 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Smpd5D6MZJ6 483 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Coq10aE9Q3H6 259 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 NumblO08919 604 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 P2ry2P35383 373 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 ApodP51910 189 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Stard6P59096 233 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 InhbbQ04999 411 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Nt5c3bQ3UFY7 300 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 OmgQ63912 440 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Adam20Q7M763 760 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 4921517D22RikQ8CET0 269 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Lpcat3Q91V01 487 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Emc3Q99KI3 261 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Trem1Q9JKE2 230 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 PrkraQ9WTX2 313 aaKnown RBP9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Mtcl1Q3UHU5 1945 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Nrxn2E9Q7X7 1710 aa9.55□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Ankdd1aA0A1L1ST07 508 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 BC035947B2RQY6 695 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Gm20518E9Q548 580 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Rab11fip2G3XA57 512 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Zfp1P08042 402 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Bmi1P25916 324 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 CdaP56389 146 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Slc27a5Q4LDG0 689 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Irgm1Q60766 409 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 SypQ62277 314 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Pced1aQ6P1Z5 449 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 SelenoiQ80TA1 398 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Ptbp3Q8BHD7 523 aaKnown RBP9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Gm9938Q8C3P5 112 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Olfr820Q8VFU5 312 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Clec2fQ8VI21 196 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Hyal1Q91ZJ9 462 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Slc35b3Q922Q5 369 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Ints12Q9D168 461 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Pfn4Q9D6I3 129 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Olfr1338A2ACY7 313 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 VirmaA2AIV2 1811 aaKnown RBP9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Gm14692A2BH01 229 aa9.54□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 ChrneP20782 493 aa9.54□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 33.2 ms