RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 NKX2-5P52952 324 aaPredicted RBP18.61■□□□□ 0.57
CNTNAP3B-212ENST00000617422 WNT4P56705 351 aa18.61■□□□□ 0.57
CNTNAP3B-212ENST00000617422 RPS7P62081 194 aaKnown RBP18.61■□□□□ 0.57
CNTNAP3B-212ENST00000617422 ARMC4Q5T2S8 1044 aa18.61■□□□□ 0.57
CNTNAP3B-212ENST00000617422 OPN5Q6U736 354 aa18.61■□□□□ 0.57
CNTNAP3B-212ENST00000617422 OR6F1Q8NGZ6 308 aa18.61■□□□□ 0.57
CNTNAP3B-212ENST00000617422 FRMD6Q96NE9 622 aa18.61■□□□□ 0.57
CNTNAP3B-212ENST00000617422 TBX5Q99593 518 aa18.61■□□□□ 0.57
CNTNAP3B-212ENST00000617422 TP63Q9H3D4 680 aaPredicted RBP18.61■□□□□ 0.57
CNTNAP3B-212ENST00000617422 CNOT1A5YKK6 2376 aaKnown RBP18.61■□□□□ 0.57
CNTNAP3B-212ENST00000617422 FAM172BPA6NC97 362 aa18.61■□□□□ 0.57
CNTNAP3B-212ENST00000617422 FTCDNL1E5RQL4 147 aa18.61■□□□□ 0.57
CNTNAP3B-212ENST00000617422 IDH3BO43837 385 aa18.61■□□□□ 0.57
CNTNAP3B-212ENST00000617422 HPP00738 406 aa18.61■□□□□ 0.57
CNTNAP3B-212ENST00000617422 ATP6V1E1P36543 226 aa18.61■□□□□ 0.57
CNTNAP3B-212ENST00000617422 GPR50Q13585 617 aa18.61■□□□□ 0.57
CNTNAP3B-212ENST00000617422 FAM69AQ5T7M9 428 aa18.61■□□□□ 0.57
CNTNAP3B-212ENST00000617422 RAB43Q86YS6 212 aa18.61■□□□□ 0.57
CNTNAP3B-212ENST00000617422 LSM14AQ8ND56 463 aaKnown RBP18.61■□□□□ 0.57
CNTNAP3B-212ENST00000617422 OR5M1Q8NGP8 315 aa18.61■□□□□ 0.57
CNTNAP3B-212ENST00000617422 NTNG2Q96CW9 530 aa18.61■□□□□ 0.57
CNTNAP3B-212ENST00000617422 TSPAN32Q96QS1 320 aa18.61■□□□□ 0.57
CNTNAP3B-212ENST00000617422 SNX18Q96RF0 628 aa18.61■□□□□ 0.57
CNTNAP3B-212ENST00000617422 NMNAT2Q9BZQ4 307 aa18.61■□□□□ 0.57
CNTNAP3B-212ENST00000617422 ASB6Q9NWX5 421 aa18.61■□□□□ 0.57
CNTNAP3B-212ENST00000617422 ANKRD10Q9NXR5 420 aa18.61■□□□□ 0.57
CNTNAP3B-212ENST00000617422 KLHL21Q9UJP4 597 aa18.61■□□□□ 0.57
CNTNAP3B-212ENST00000617422 V9GYH0 126 aa18.61■□□□□ 0.57
CNTNAP3B-212ENST00000617422 SLC22A31A6NKX4 558 aa18.6■□□□□ 0.57
CNTNAP3B-212ENST00000617422 C12orf71A8MTZ7 269 aa18.6■□□□□ 0.57
CNTNAP3B-212ENST00000617422 G3V3Y1 287 aa18.6■□□□□ 0.57
CNTNAP3B-212ENST00000617422 GRPRP30550 384 aa18.6■□□□□ 0.57
CNTNAP3B-212ENST00000617422 LIPKQ5VXJ0 399 aa18.6■□□□□ 0.57
CNTNAP3B-212ENST00000617422 SLC6A19Q695T7 634 aa18.6■□□□□ 0.57
CNTNAP3B-212ENST00000617422 MDGA2Q7Z553 956 aa18.6■□□□□ 0.57
CNTNAP3B-212ENST00000617422 FADS6Q8N9I5 356 aa18.6■□□□□ 0.57
CNTNAP3B-212ENST00000617422 ZMYND19Q96E35 227 aaPredicted RBP18.6■□□□□ 0.57
CNTNAP3B-212ENST00000617422 TRMT61AQ96FX7 289 aaKnown RBP18.6■□□□□ 0.57
CNTNAP3B-212ENST00000617422 JAM3Q9BX67 310 aa18.6■□□□□ 0.57
CNTNAP3B-212ENST00000617422 BARHL1Q9BZE3 327 aa18.6■□□□□ 0.57
CNTNAP3B-212ENST00000617422 IL17BQ9UHF5 180 aa18.6■□□□□ 0.57
CNTNAP3B-212ENST00000617422 ZNF346Q9UL40 294 aaKnown RBP18.6■□□□□ 0.57
CNTNAP3B-212ENST00000617422 TP53I11O14683 189 aa18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 RAD1O60671 282 aa18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 TRAPPC2P0DI81 140 aa18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 TRAPPC2BP0DI82 140 aa18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 MSX1P28360 303 aa18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 C19orf57Q0VDD7 668 aa18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 LYPD4Q6UWN0 246 aa18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 NRARPQ7Z6K4 114 aa18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 PHC2Q8IXK0 858 aa18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 ATP6V1C2Q8NEY4 427 aa18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 STK35Q8TDR2 534 aa18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 TSSK2Q96PF2 358 aa18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 COL25A1Q9BXS0 654 aaPredicted RBP18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 ISG20L2Q9H9L3 353 aaKnown RBP18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 CMAHPQ9Y471 501 aa18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 C11orf98E9PRG8 122 aa18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 SSX4O60224 188 aa18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 HIST1H2ABP04908 130 aa18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 SBK2P0C263 348 aa18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 PAICSP22234 425 aaKnown RBP18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 RCVRNP35243 200 aa18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 APOBEC1P41238 236 aaKnown RBP18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 CHAF1BQ13112 559 aa18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 MESTQ5EB52 335 aa18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 C1QTNF12Q5T7M4 302 aa18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 HIST3H2AQ7L7L0 130 aa18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 RFLNBQ8N5W9 214 aa18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 PSD4Q8NDX1 1056 aa18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 PSMF1Q92530 271 aa18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 HIST1H2ACQ93077 130 aa18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 ARHGAP9Q9BRR9 750 aa18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 SDHAF3Q9NRP4 125 aa18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 SNTG1Q9NSN8 517 aa18.59■□□□□ 0.57
CNTNAP3B-212ENST00000617422 H7C1C5 153 aa18.58■□□□□ 0.57
CNTNAP3B-212ENST00000617422 MT-ATP6P00846 226 aa18.58■□□□□ 0.57
CNTNAP3B-212ENST00000617422 IL1AP01583 271 aa18.58■□□□□ 0.57
CNTNAP3B-212ENST00000617422 SDHAP31040 664 aa18.58■□□□□ 0.57
CNTNAP3B-212ENST00000617422 DDOSTP39656 456 aa18.58■□□□□ 0.57
CNTNAP3B-212ENST00000617422 HCCSP53701 268 aa18.58■□□□□ 0.57
CNTNAP3B-212ENST00000617422 LCN6P62502 163 aa18.58■□□□□ 0.57
CNTNAP3B-212ENST00000617422 SLC25A53Q5H9E4 307 aa18.58■□□□□ 0.57
CNTNAP3B-212ENST00000617422 ATAD3CQ5T2N8 411 aa18.58■□□□□ 0.57
CNTNAP3B-212ENST00000617422 LEG1Q6P5S2 330 aa18.58■□□□□ 0.57
CNTNAP3B-212ENST00000617422 MAMDC2Q7Z304 686 aaPredicted RBP18.58■□□□□ 0.57
CNTNAP3B-212ENST00000617422 TMEM156Q8N614 296 aa18.58■□□□□ 0.57
CNTNAP3B-212ENST00000617422 ZFP41Q8N8Y5 198 aa18.58■□□□□ 0.57
CNTNAP3B-212ENST00000617422 OR5J2Q8NH18 312 aa18.58■□□□□ 0.57
CNTNAP3B-212ENST00000617422 ZNF417Q8TAU3 575 aa18.58■□□□□ 0.57
CNTNAP3B-212ENST00000617422 PAQR8Q8TEZ7 354 aa18.58■□□□□ 0.57
CNTNAP3B-212ENST00000617422 ZNF587Q96SQ5 575 aaPredicted RBP18.58■□□□□ 0.57
CNTNAP3B-212ENST00000617422 GPR87Q9BY21 358 aa18.58■□□□□ 0.57
CNTNAP3B-212ENST00000617422 SRRQ9GZT4 340 aa18.58■□□□□ 0.57
CNTNAP3B-212ENST00000617422 HAO2Q9NYQ3 351 aa18.58■□□□□ 0.57
CNTNAP3B-212ENST00000617422 SPIN1Q9Y657 262 aaPredicted RBP18.58■□□□□ 0.57
CNTNAP3B-212ENST00000617422 DCTN6O00399 190 aa18.58■□□□□ 0.56
CNTNAP3B-212ENST00000617422 TXNDC12O95881 172 aa18.58■□□□□ 0.56
CNTNAP3B-212ENST00000617422 TFP02787 698 aa18.58■□□□□ 0.56
CNTNAP3B-212ENST00000617422 APEHP13798 732 aaKnown RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms