RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 EVA1AQ9H8M9 152 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 WDR76Q9H967 626 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 TIMMDC1Q9NPL8 285 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 NDUFB11Q9NX14 153 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 MED29Q9NX70 200 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 P4HTMQ9NXG6 502 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 EXOSC1Q9Y3B2 195 aaKnown RBP7.03□□□□□ -1.28
NEK3-207ENST00000617054 KMT2EQ8IZD2 1858 aa7.03□□□□□ -1.28
NEK3-207ENST00000617054 MAP1BP46821 2468 aaKnown RBP7.02□□□□□ -1.29
NEK3-207ENST00000617054 TMEM129A0AVI4 362 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 ANKUB1A6NFN9 424 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 EREGO14944 169 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 INHBBP09529 407 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 CPEP16870 476 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 DNASE1L1P49184 302 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 ZNF41P51814 821 aaPredicted RBP7.02□□□□□ -1.29
NEK3-207ENST00000617054 SRSF6Q13247 344 aaKnown RBP7.02□□□□□ -1.29
NEK3-207ENST00000617054 MEP1BQ16820 701 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 ARL9Q6T311 187 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 OR8K3Q8NH51 312 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 MARVELD3Q96A59 401 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 ORAI1Q96D31 301 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 TXNDC15Q96J42 360 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 C5orf34Q96MH7 638 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 PPIL3Q9H2H8 161 aaKnown RBP7.02□□□□□ -1.29
NEK3-207ENST00000617054 PROK2Q9HC23 129 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 SF3B6Q9Y3B4 125 aaKnown RBP7.02□□□□□ -1.29
NEK3-207ENST00000617054 A0A1B0GTH9 108 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 SHISA3A0PJX4 238 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 MAGEB3O15480 346 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 RAMP1O60894 148 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 NPIPB7O75200 414 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 MPZL1O95297 269 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 PSKH1P11801 424 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 IMPDH2P12268 514 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 BMP4P12644 408 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 TGM1P22735 817 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 SDHAP31040 664 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 SDC2P34741 201 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 TMED10P49755 219 aaKnown RBP7.02□□□□□ -1.29
NEK3-207ENST00000617054 RPS15P62841 145 aaKnown RBP7.02□□□□□ -1.29
NEK3-207ENST00000617054 CHAF1BQ13112 559 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 ATP1A4Q13733 1029 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 ODF4Q2M2E3 257 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 SPINK14Q6IE38 97 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 USP43Q70EL4 1123 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 GPAT4Q86UL3 456 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 C7orf57Q8NEG2 295 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 UFD1Q92890 307 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 ALG12Q9BV10 488 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 SPRY4Q9C004 299 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 STUB1Q9UNE7 303 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 SSR3Q9UNL2 185 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 A6NL46 340 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 ZNF814B7Z6K7 855 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 MS4A18H0YCH9 400 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 RPP14O95059 124 aaKnown RBP7.02□□□□□ -1.29
NEK3-207ENST00000617054 OR6A2O95222 327 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 DLGAP3O95886 979 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 HLA-DQA2P01906 255 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 DCTN2Q13561 401 aaKnown RBP7.02□□□□□ -1.29
NEK3-207ENST00000617054 KRR1Q13601 381 aaKnown RBP7.02□□□□□ -1.29
NEK3-207ENST00000617054 GALEQ14376 348 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 MOGQ16653 247 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 PLPPR5Q32ZL2 321 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 MS4A18Q3C1V0 323 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 STPG1Q5TH74 334 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 CDCP2Q5VXM1 449 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 C16orf87Q6PH81 154 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 MAMDC2Q7Z304 686 aaPredicted RBP7.02□□□□□ -1.29
NEK3-207ENST00000617054 SYT9Q86SS6 491 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 OR4K17Q8NGC6 315 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 TTC9Q92623 222 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 ZNF775Q96BV0 537 aaPredicted RBP7.02□□□□□ -1.29
NEK3-207ENST00000617054 OR5B2Q96R09 309 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 FKRPQ9H9S5 495 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 ACOXLQ9NUZ1 547 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 HPF1Q9NWY4 346 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 BABAM2Q9NXR7 383 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 GALNT8Q9NY28 637 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 ZNF229Q9UJW7 825 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 GNG8Q9UK08 70 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 KLHDC2Q9Y2U9 406 aa7.02□□□□□ -1.29
NEK3-207ENST00000617054 IGHV3-15A0A0B4J1V0 119 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 A0A1W2PRG6 482 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 PLPP3O14495 311 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 ARPC3O15145 178 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 RGS5O15539 181 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 AHSA1O95433 338 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 LCN1P31025 176 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 ID4P47928 161 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 SSR4P51571 173 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 OC90Q02509 493 aaPredicted RBP7.01□□□□□ -1.29
NEK3-207ENST00000617054 FMODQ06828 376 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 MYBPHQ13203 477 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 INAQ16352 499 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 EXT1Q16394 746 aa7.01□□□□□ -1.29
NEK3-207ENST00000617054 TMEM176BQ3YBM2 270 aaPredicted RBP7.01□□□□□ -1.29
NEK3-207ENST00000617054 ZNF404Q494X3 552 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms