RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 CPXM2Q8N436 756 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 C15orf54Q8N8G6 183 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 SLAIN1Q8ND83 568 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 OR51Q1Q8NH59 317 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 SGK3Q96BR1 496 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 IL17FQ96PD4 163 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 ST6GALNAC5Q9BVH7 336 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 H7BYZ3 331 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 EFNA3P52797 238 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 SLC9A3R2Q15599 337 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 SGCBQ16585 318 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 CDONQ4KMG0 1287 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 FAM71E1Q6IPT2 247 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 ZNF620Q6ZNG0 422 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 SLCO4C1Q6ZQN7 724 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 Q6ZTK2 550 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 OR2L13Q8N349 312 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 ZNF485Q8NCK3 441 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 OR51S1Q8NGJ8 323 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 OR8D4Q8NGM9 314 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 OR13C8Q8NGS7 320 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 UBE2FQ969M7 185 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 SPHK2Q9NRA0 654 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 MDFIC2A0A1B0GVS7 189 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 TMEM269A0A1B0GVZ9 245 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 C9J4A7 227 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 ST8SIA3O43173 380 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 CNOT4O95628 575 aaKnown RBP11.85□□□□□ -0.51
PTCH1-212ENST00000546744 SFTPDP35247 375 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 DGCR2P98153 550 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 CAMK2BQ13554 666 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 PRRT3Q5FWE3 981 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 PLPP4Q5VZY2 271 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 DPPA4Q7L190 304 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 PRICKLE2Q7Z3G6 844 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 CALHM3Q86XJ0 350 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 PXYLP1Q8TE99 480 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 HMGB4Q8WW32 186 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 OR1E3Q8WZA6 343 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 MMP26Q9NRE1 261 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 CMC2Q9NRP2 79 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 GLCEO94923 617 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 GJB5O95377 273 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 CD37P11049 281 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 SPNP16150 400 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 CASRP41180 1078 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 CRMP1Q14194 572 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 ELOCQ15369 112 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 Q3ZCU0 254 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 RNLSQ5VYX0 342 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 UEVLDQ8IX04 471 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 MITD1Q8WV92 249 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 PATZ1Q9HBE1 687 aaKnown RBP11.85□□□□□ -0.51
PTCH1-212ENST00000546744 BCL2L10Q9HD36 194 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 SLC2A4RGQ9NR83 387 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 SLCO3A1Q9UIG8 710 aa11.85□□□□□ -0.51
PTCH1-212ENST00000546744 TMEFF2Q9UIK5 374 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-212ENST00000546744 GPR55Q9Y2T6 319 aaPredicted RBP11.85□□□□□ -0.51
PTCH1-212ENST00000546744 SCO1O75880 301 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 SOD1P00441 154 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 PSMB3P49720 205 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 ID2Q02363 134 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 LY6G5CQ5SRR4 150 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 BBS1Q8NFJ9 593 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 LKAAEAR1Q8TD35 194 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 C2CD4CQ8TF44 421 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 CYB5D2Q8WUJ1 264 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 WDR92Q96MX6 357 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 SLC46A1Q96NT5 459 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 NECTIN4Q96NY8 510 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 ZFYVE21Q9BQ24 234 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 LYRM2Q9NU23 88 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-212ENST00000546744 SLC39A9Q9NUM3 307 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 HRASLS2Q9NWW9 162 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 GJD2Q9UKL4 321 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 B3GALT1Q9Y5Z6 326 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 C1orf105O95561 183 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 THBS1P07996 1170 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 ANXA7P20073 488 aaKnown RBP11.84□□□□□ -0.51
PTCH1-212ENST00000546744 PCMT1P22061 227 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 SOX18P35713 384 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 ZNF133P52736 654 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-212ENST00000546744 DCAF7P61962 342 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 OR9A2Q8NGT5 310 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 CPNE4Q96A23 557 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-212ENST00000546744 CMSS1Q9BQ75 279 aaKnown RBP11.84□□□□□ -0.51
PTCH1-212ENST00000546744 EDEM2Q9BV94 578 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 OR10A5Q9H207 317 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 OR10A2Q9H208 303 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 CHRDQ9H2X0 955 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 SPACA1Q9HBV2 294 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 SLC25A37Q9NYZ2 338 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 TP53TG5Q9Y2B4 290 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 MEIS3P1A6NDR6 274 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 NPIPB15A6NHN6 443 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-212ENST00000546744 LEUTXA8MZ59 168 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 HHLA1C9JL84 531 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 ZNF593O00488 134 aaPredicted RBP11.84□□□□□ -0.51
PTCH1-212ENST00000546744 PIP5K1CO60331 668 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 H2AFB1P0C5Y9 115 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms