RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 RANBP3Q9H6Z4 567 aaPredicted RBP-0.06□□□□□ -2.42
COPB1-212ENST00000534771 COPS7BQ9H9Q2 264 aaPredicted RBP-0.06□□□□□ -2.42
COPB1-212ENST00000534771 AATFQ9NY61 560 aaKnown RBP eCLIP-0.06□□□□□ -2.42
COPB1-212ENST00000534771 KCNIP1Q9NZI2 227 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 NFKBIL1Q9UBC1 381 aaPredicted RBP-0.06□□□□□ -2.42
COPB1-212ENST00000534771 XCL2Q9UBD3 114 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 ANAPC7Q9UJX3 599 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 STAP1Q9ULZ2 295 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 CBY1Q9Y3M2 126 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 AP4B1Q9Y6B7 739 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 CUX2O14529 1486 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 CACNA1GO43497 2377 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 CEMIPQ8WUJ3 1361 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 ADGRA3Q8IWK6 1321 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 FANCIQ9NVI1 1328 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 SCN1AP35498 2009 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 IGLV10-54A0A075B6I4 117 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 A0A0U1RQV1 116 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 SMIM30A4D0T7 59 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 A4D1N5 150 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 BTNL10A8MVZ5 291 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 CCER2I3L3R5 266 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 DDX39AO00148 427 aaKnown RBP-0.07□□□□□ -2.42
COPB1-212ENST00000534771 PSMA7O14818 248 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 STX7O15400 261 aaKnown RBP-0.07□□□□□ -2.42
COPB1-212ENST00000534771 SLC7A4O43246 635 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 HSF2BPO75031 334 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 LCA5LO95447 670 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 H6PDO95479 791 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 F10P00742 488 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 IGKV1-39P01597 117 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 IGKV1D-39P04432 117 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 HLA-DPB1P04440 258 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 LGALS2P05162 132 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 ZNF35P13682 527 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 POLR2EP19388 210 aaKnown RBP-0.07□□□□□ -2.42
COPB1-212ENST00000534771 TBXA2RP21731 343 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 HSPA2P54652 639 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 RPS21P63220 83 aaKnown RBP-0.07□□□□□ -2.42
COPB1-212ENST00000534771 RBP5P82980 135 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 YWHAHQ04917 246 aaPredicted RBP-0.07□□□□□ -2.42
COPB1-212ENST00000534771 PPIDQ08752 370 aaKnown RBP-0.07□□□□□ -2.42
COPB1-212ENST00000534771 PDIA2Q13087 525 aaKnown RBP-0.07□□□□□ -2.42
COPB1-212ENST00000534771 AQP6Q13520 282 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 SNRNP35Q16560 246 aaKnown RBP-0.07□□□□□ -2.42
COPB1-212ENST00000534771 CPTPQ5TA50 214 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 FAM222AQ5U5X8 452 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 AFTPHQ6ULP2 937 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 ZNF493Q6ZR52 646 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 LINC00173Q6ZV60 143 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 SGPP2Q8IWX5 399 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 STPG2Q8N412 459 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 LY6G5BQ8NDX9 201 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 LPCAT1Q8NF37 534 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 VN1R2Q8NFZ6 395 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 OR51G2Q8NGK0 314 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 N4BP2L2Q92802 583 aaPredicted RBP-0.07□□□□□ -2.42
COPB1-212ENST00000534771 FGF14Q92915 247 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 NCLNQ969V3 563 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 WDR34Q96EX3 536 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 ZBED3Q96IU2 234 aaPredicted RBP-0.07□□□□□ -2.42
COPB1-212ENST00000534771 ZNF681Q96N22 645 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 SLC6A7Q99884 636 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 SLC35A5Q9BS91 424 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 CENPOQ9BU64 300 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 GABARAPL3Q9BY60 117 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 MRPL37Q9BZE1 423 aaKnown RBP-0.07□□□□□ -2.42
COPB1-212ENST00000534771 RAB34Q9BZG1 259 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 ACTR6Q9GZN1 396 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 RHOJQ9H4E5 214 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 AIPL1Q9NZN9 384 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 CTSFQ9UBX1 484 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 TBK1Q9UHD2 729 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 PSG8Q9UQ74 426 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 STRCP1A6NGW2 1772 aa-0.07□□□□□ -2.42
COPB1-212ENST00000534771 FRMPD4Q14CM0 1322 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 TRAV6A0A075B6T7 132 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 RNF222A6NCQ9 220 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 LRRC30A6NM36 301 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 LOC110117498-PIK3R3F6TDL0 507 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 RS1O15537 224 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 AQP9O43315 295 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 CXCL13O43927 109 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 SH3BP5O60239 455 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 CXCL14O95715 111 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 IGF1P05019 195 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 FABP3P05413 133 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 ZNF688P0C7X2 276 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 UBTFL6P0CB48 400 aaPredicted RBP-0.08□□□□□ -2.42
COPB1-212ENST00000534771 INAFM2P0DMQ5 153 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 RALAP11233 206 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 PSMB5P28074 263 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 PRDX2P32119 198 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 CYLC1P35663 651 aaPredicted RBP-0.08□□□□□ -2.42
COPB1-212ENST00000534771 CDKN2BP42772 138 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 NCBP2P52298 156 aaKnown RBP eCLIP-0.08□□□□□ -2.421e-14■■■□□ 18.4
COPB1-212ENST00000534771 KIAA1024LP59773 190 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 BFSP1Q12934 665 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 PPIL2Q13356 520 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 TPBGQ13641 420 aa-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms