RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 OR5L2Q8NGL0 311 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 OR8K3Q8NH51 312 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 NRGNQ92686 78 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 SLCO2A1Q92959 643 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 SLAMF9Q96A28 289 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 LRRC39Q96DD0 335 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 DGAT2Q96PD7 388 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 EFCAB11Q9BUY7 163 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 ROGDIQ9GZN7 287 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 DDX47Q9H0S4 455 aaKnown RBP5.84□□□□□ -1.47
CSDE1-213ENST00000530784 EXO5Q9H790 373 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 NT5DC2Q9H857 520 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 CNOT10Q9H9A5 744 aaKnown RBP5.84□□□□□ -1.47
CSDE1-213ENST00000530784 POPDC3Q9HBV1 291 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 EQTNQ9NQ60 294 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 DNAJC11Q9NVH1 559 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 L3MBTL1Q9Y468 752 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 FAM215AQ9Y5M1 114 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 TEX264Q9Y6I9 313 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 SPACA6W5XKT8 324 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 ZGRF1Q86YA3 2104 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 MDC1Q14676 2089 aaKnown RBP5.84□□□□□ -1.47
CSDE1-213ENST00000530784 TRGV5A0A0B4J1U4 118 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 IGKV3D-20A0A0C4DH25 116 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 ATP6AP2A0A1C7CYW4 349 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 H7C423 109 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 KLF11O14901 512 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 ATP6AP2O75787 350 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 LINGO3P0C6S8 592 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 CCL3P10147 92 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 CD99P14209 185 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 GABRA1P14867 456 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 IST1P53990 364 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 CDH13P55290 713 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 TAS2R39P59534 338 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 KCNJ2P63252 427 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 ILF2Q12905 390 aaKnown RBP5.83□□□□□ -1.48
CSDE1-213ENST00000530784 DOC2AQ14183 400 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 PDK4Q16654 411 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 HYAL4Q2M3T9 481 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 SLC25A35Q3KQZ1 300 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 PAGE2BQ5JRK9 111 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 ADNP2Q6IQ32 1131 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 SLC35F6Q8N357 371 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 ZNF321PQ8N8H1 164 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 SNX31Q8N9S9 440 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 NPEPL1Q8NDH3 523 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 SLC22A8Q8TCC7 542 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 ANKRD49Q8WVL7 239 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 ARSGQ96EG1 525 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 RMND5BQ96G75 393 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-213ENST00000530784 CAPZA3Q96KX2 299 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 RUNDC3BQ96NL0 473 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 ATOH8Q96SQ7 321 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 FOXC2Q99958 501 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 TRIM15Q9C019 465 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 RHOJQ9H4E5 214 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 EHD1Q9H4M9 534 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 OPA3Q9H6K4 179 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 LYRM4Q9HD34 91 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 BOKQ9UMX3 212 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-213ENST00000530784 SNX12Q9UMY4 172 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 ATG4BQ9Y4P1 393 aa5.83□□□□□ -1.48
CSDE1-213ENST00000530784 F8P00451 2351 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 TACC2O95359 2948 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 SVILO95425 2214 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 A0A0J9YWU9 116 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 ANKRD61A6NGH8 418 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 MSGN1A6NI15 193 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 RTCAO00442 366 aaKnown RBP5.82□□□□□ -1.48
CSDE1-213ENST00000530784 TAPBPO15533 448 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 HCN1O60741 890 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 ZNF354AO60765 605 aaPredicted RBP5.82□□□□□ -1.48
CSDE1-213ENST00000530784 KHDRBS3O75525 346 aaKnown RBP5.82□□□□□ -1.48
CSDE1-213ENST00000530784 CTAG2O75638 210 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 STK16O75716 305 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 ETHE1O95571 254 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 DANCRP0C864 163 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 CD22P20273 847 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 IL11P20809 199 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 HIST1H1TP22492 207 aaPredicted RBP5.82□□□□□ -1.48
CSDE1-213ENST00000530784 CPN2P22792 545 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 IVDP26440 423 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 PEX19P40855 299 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 SSR2P43308 183 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 ATP6V0D1P61421 351 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 DR1Q01658 176 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 IRF8Q02556 426 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 ASPHQ12797 758 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 HSPB3Q12988 150 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 PDIA2Q13087 525 aaKnown RBP5.82□□□□□ -1.48
CSDE1-213ENST00000530784 SLC10A1Q14973 349 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 TOMM20Q15388 145 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 FBXO48Q5FWF7 155 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 C9orf152Q5JTZ5 239 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 CDKL4Q5MAI5 379 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 RIPPLY2Q5TAB7 128 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 PRAMEF20Q5VT98 475 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 SLC22A10Q63ZE4 541 aa5.82□□□□□ -1.48
CSDE1-213ENST00000530784 HIST2H2AA3Q6FI13 130 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms