RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 NOTCH3Q9UM47 2321 aa4.09□□□□□ -1.76
HTT-211ENST00000513326 BIRC6Q9NR09 4857 aa4.09□□□□□ -1.76
HTT-211ENST00000513326 TENM3Q9P273 2699 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 A0A087WZY1 265 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 MDFIC2A0A1B0GVS7 189 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 ZNF716A6NP11 495 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 ZNF724A8MTY0 619 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 G3V4G9 280 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 hCG_2039718K7EN88 272 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 NR5A2O00482 541 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 RRHO14718 337 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 TP73O15350 636 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 PLPP2O43688 288 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 PLOD3O60568 738 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 KERAO60938 352 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 ADRA2AP08913 450 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 PABPC4LP0CB38 370 aaKnown RBP4.08□□□□□ -1.76
HTT-211ENST00000513326 SAGP10523 405 aaPredicted RBP4.08□□□□□ -1.76
HTT-211ENST00000513326 LYL1P12980 280 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 TSPAN8P19075 237 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 TCN1P20061 433 aaPredicted RBP4.08□□□□□ -1.76
HTT-211ENST00000513326 ME2P23368 584 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 IVDP26440 423 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 ZNF41P51814 821 aaPredicted RBP4.08□□□□□ -1.76
HTT-211ENST00000513326 ATP6V0D1P61421 351 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 MRPS22P82650 360 aaKnown RBP4.08□□□□□ -1.76
HTT-211ENST00000513326 ZP4Q12836 540 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 TRAF3Q13114 568 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 GTF2H2Q13888 395 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 EFNB3Q15768 340 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 DECR1Q16698 335 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 ARL13AQ5H913 290 aaPredicted RBP4.08□□□□□ -1.76
HTT-211ENST00000513326 CCNJQ5T5M9 372 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 AVPI1Q5T686 147 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 LIPJQ5W064 366 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 FRG2Q64ET8 278 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 GTF2H2CQ6P1K8 395 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 CCBE1Q6UXH8 406 aaPredicted RBP4.08□□□□□ -1.76
HTT-211ENST00000513326 ZNF813Q6ZN06 617 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 GALNT5Q7Z7M9 940 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 CENPLQ8N0S6 344 aaPredicted RBP4.08□□□□□ -1.76
HTT-211ENST00000513326 BOLLQ8N9W6 283 aaKnown RBP4.08□□□□□ -1.76
HTT-211ENST00000513326 L3MBTL4Q8NA19 623 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 PCYOX1LQ8NBM8 494 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 ZNF540Q8NDQ6 660 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 OR52N4Q8NGI2 321 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 OR51F2Q8NH61 342 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 MAGOHBQ96A72 148 aaKnown RBP4.08□□□□□ -1.76
HTT-211ENST00000513326 FRG2BQ96QU4 278 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 ZNF347Q96SE7 839 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 LMF2Q9BU23 707 aaKnown RBP4.08□□□□□ -1.76
HTT-211ENST00000513326 EBPLQ9BY08 206 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 MMP27Q9H306 513 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 NOL11Q9H8H0 719 aaKnown RBP4.08□□□□□ -1.76
HTT-211ENST00000513326 FKRPQ9H9S5 495 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 POPDC3Q9HBV1 291 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 EQTNQ9NQ60 294 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 DDX28Q9NUL7 540 aaKnown RBP4.08□□□□□ -1.76
HTT-211ENST00000513326 TAS2R16Q9NYV7 291 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 KLHL9Q9P2J3 617 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 MALT1Q9UDY8 824 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 HSF4Q9ULV5 492 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 ACOT9Q9Y305 439 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 ANGPTL3Q9Y5C1 460 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 ZNF780BQ9Y6R6 833 aa4.08□□□□□ -1.76
HTT-211ENST00000513326 IGHV3OR16-10A0A075B7F0 116 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 IGKV3D-15A0A087WSY6 115 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 SH2D7A6NKC9 451 aaPredicted RBP4.07□□□□□ -1.76
HTT-211ENST00000513326 LINC01548A6NM66 108 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 DNALI1O14645 258 aaPredicted RBP4.07□□□□□ -1.76
HTT-211ENST00000513326 PIN1P1O15428 100 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 BCAS1O75363 584 aaPredicted RBP4.07□□□□□ -1.76
HTT-211ENST00000513326 RP2O75695 350 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 MPZL1O95297 269 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 IPO7O95373 1038 aaKnown RBP4.07□□□□□ -1.76
HTT-211ENST00000513326 BCL10O95999 233 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 PDYNP01213 254 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 SLPIP03973 132 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 CECR9P0C854 216 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 ACP2P11117 423 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 CDH2P19022 906 aaPredicted RBP4.07□□□□□ -1.76
HTT-211ENST00000513326 PCMT1P22061 227 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 PRTN3P24158 256 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 ELK4P28324 431 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 GCH1P30793 250 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 ASMTP46597 345 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 SOX2P48431 317 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 HTR6P50406 440 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 NCBP2P52298 156 aaKnown RBP eCLIP4.07□□□□□ -1.76
HTT-211ENST00000513326 PHEXP78562 749 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 NAAAQ02083 359 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 MAD2L1BPQ15013 274 aaPredicted RBP4.07□□□□□ -1.76
HTT-211ENST00000513326 SEC23BQ15437 767 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 SLC9A3R2Q15599 337 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 GPR68Q15743 365 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 BAK1Q16611 211 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 KLF17Q5JT82 389 aaPredicted RBP4.07□□□□□ -1.76
HTT-211ENST00000513326 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.07□□□□□ -1.76
HTT-211ENST00000513326 PDSS1Q5T2R2 415 aa4.07□□□□□ -1.76
HTT-211ENST00000513326 TSPO2Q5TGU0 170 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms