RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 PTGES3LE9PB15 166 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 M0R3G1 203 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 IL33O95760 270 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 IL18BPO95998 194 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 RAF1P04049 648 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 POU2F1P14859 743 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 CD53P19397 219 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 EPHA2P29317 976 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 FMO3P31513 532 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 IDH2P48735 452 aaKnown RBP8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 PMS2P3Q13401 168 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 FGFBP1Q14512 234 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 RAB39AQ14964 217 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 OCLNQ16625 522 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 DEFB113Q30KQ7 82 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 CCNJQ5T5M9 372 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 GTF2IRD2BQ6EKJ0 949 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 FIGNL1Q6PIW4 674 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 ZNF474Q6S9Z5 364 aaPredicted RBP8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 APOOLQ6UXV4 268 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 PTCHD4Q6ZW05 846 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 OLIG3Q7RTU3 272 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 BTLAQ7Z6A9 289 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 ZER1Q7Z7L7 766 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 GTF2IRD2Q86UP8 949 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 LSRQ86X29 649 aaPredicted RBP8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 ERI1Q8IV48 349 aaKnown RBP8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 CDK20Q8IZL9 346 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 CIARTQ8N365 385 aaPredicted RBP8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 LSMEM1Q8N8F7 131 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 TEX47Q8TBZ9 253 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 APH1BQ8WW43 257 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 RORBQ92753 470 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 MUL1Q969V5 352 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 STARD4Q96DR4 205 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 ZNF845Q96IR2 970 aaPredicted RBP8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 SFXN2Q96NB2 322 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 WFIKKN1Q96NZ8 548 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 SIGLEC11Q96RL6 698 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 WFDC6Q9BQY6 131 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 YIPF3Q9GZM5 350 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 OPN3Q9H1Y3 402 aaPredicted RBP8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 UBQLN4Q9NRR5 601 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 MED17Q9NVC6 651 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 FKBP14Q9NWM8 211 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 ZNF226Q9NYT6 803 aa8.4□□□□□ -1.06
TMEM39A-208ENST00000486159 A0A1W2PNV4 684 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 A8MXE2 369 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 ZNF99A8MXY4 864 aaPredicted RBP8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 H3BN98 237 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 H3BSA7 217 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 KLF4O43474 513 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 CHP2O43745 196 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 AHCYL1O43865 530 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 FADS1O60427 444 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 TPST2O60704 377 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 TRMUO75648 421 aaKnown RBP8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 IGKV1D-16P01601 117 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 OPN1LWP04000 364 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 HMGN1P05114 100 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 CDK1P06493 297 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 NGFRP08138 427 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 HTR1AP08908 422 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 ZNF708P17019 499 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 PCMT1P22061 227 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 DPP4P27487 766 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 SRD5A2P31213 254 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 HOXC12P31275 282 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 CCKARP32238 428 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 KIR2DL2P43627 348 aaPredicted RBP8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 OMPP47874 163 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 RFX3P48380 749 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 GIPRP48546 466 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 CLDN20P56880 219 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 SIRPAP78324 504 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 CDK5Q00535 292 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 SNTA1Q13424 505 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 OR1Q1Q15612 314 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 TBCEQ15813 527 aaPredicted RBP8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 NEDD8Q15843 81 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 MAPK14Q16539 360 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 C4orf48Q5BLP8 95 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 SYT6Q5T7P8 510 aaPredicted RBP8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 RNLSQ5VYX0 342 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 XAF1Q6GPH4 301 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 SLC27A4Q6P1M0 643 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 MARCH3Q86UD3 253 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 CXorf67Q86X51 503 aaPredicted RBP8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 OR2M3Q8NG83 312 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 RAB2BQ8WUD1 216 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 TMCO6Q96DC7 493 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 MBD6Q96DN6 1003 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 SLC38A2Q96QD8 506 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 UCN2Q96RP3 112 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 COPS4Q9BT78 406 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 RACGAP1Q9H0H5 632 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 HHATLQ9HCP6 504 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 EXOSC3Q9NQT5 275 aaKnown RBP8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 IL20Q9NYY1 176 aa8.39□□□□□ -1.07
TMEM39A-208ENST00000486159 SELENONQ9NZV5 590 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms