RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 SSR3Q9UNL2 185 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 GRIP1Q9Y3R0 1128 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 SPENQ96T58 3664 aaKnown RBP7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 CACNA1CQ13936 2221 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 HTR3EA5X5Y0 456 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 FTCDNL1E5RQL4 147 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 J3QLW9 94 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 TM4SF5O14894 197 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 MAGEB3O15480 346 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 AKAP8O43823 692 aaKnown RBP7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 SLC25A12O75746 678 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 GPANK1O95872 356 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 OPN1LWP04000 364 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 CYC1P08574 325 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 JMJD7P0C870 316 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 HLA-DOBP13765 273 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 ZNF19P17023 458 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 TCN2P20062 427 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 AHCYP23526 432 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 F8A1P23610 371 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 GRPRP30550 384 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 CAV3P56539 151 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 RAB15P59190 212 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 PSPHP78330 225 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 Q0VFX4 171 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 FOXF1Q12946 379 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 PON3Q15166 354 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 INAQ16352 499 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 ZNF468Q5VIY5 522 aaPredicted RBP7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 IL20RBQ6UXL0 311 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 MISPQ8IVT2 679 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 WDFY1Q8IWB7 410 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 ATP6V1C2Q8NEY4 427 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 METTL7AQ9H8H3 244 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 SRA1Q9HD15 236 aaKnown RBP7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 CCDC59Q9P031 241 aaKnown RBP7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 GRHPRQ9UBQ7 328 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 KLHL21Q9UJP4 597 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 TCFL5Q9UL49 500 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 PADI1Q9ULC6 663 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 WIF1Q9Y5W5 379 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 CPAMD8Q8IZJ3 1885 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 PCSK5Q92824 1860 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 ACACBO00763 2458 aa7.98□□□□□ -1.13
CDC42SE1-204ENST00000483763 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 CD8B2A6NJW9 211 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 H3BML4 177 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 PSMD9O00233 223 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 IDH3BO43837 385 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 CDRT1O95170 752 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 TXNDC12O95881 172 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 MT-CO3P00414 261 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 HIST1H2ABP04908 130 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 CD8BP10966 210 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 APEHP13798 732 aaKnown RBP7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 RPS27P42677 84 aaKnown RBP7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 RUNX1T1Q06455 604 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 GGTLC2Q14390 218 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 TRIP6Q15654 476 aaKnown RBP7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 TP53I3Q53FA7 332 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 ARMC4Q5T2S8 1044 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 TMPRSS11AQ6ZMR5 421 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 PLEKHG7Q6ZR37 379 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 LINC00299Q6ZSB3 139 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 HIST3H2AQ7L7L0 130 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 PPP1R32Q7Z5V6 425 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 KRT77Q7Z794 578 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 ZNF417Q8TAU3 575 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 POC1BQ8TC44 478 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 HIST1H2ACQ93077 130 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 ZNF587Q96SQ5 575 aaPredicted RBP7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 ALG12Q9BV10 488 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 SYT4Q9H2B2 425 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 MARCH7Q9H992 704 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 DLL3Q9NYJ7 618 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 PPP4R1LQ9P1A2 415 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 SSUH2Q9Y2M2 353 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 MAP1BP46821 2468 aaKnown RBP7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 A0A087WV48 116 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 SLC30A4O14863 429 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 DXOO77932 396 aaKnown RBP7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 PSKH1P11801 424 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 FOLR3P41439 243 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 TMED10P49755 219 aaKnown RBP7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 KRR1Q13601 381 aaKnown RBP7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 ACKR1Q16570 336 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 SGCBQ16585 318 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 PLPPR5Q32ZL2 321 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 GLYR1Q49A26 553 aaPredicted RBP7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 FAM27D1Q5T7N8 215 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 CDCP2Q5VXM1 449 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 VASH1Q7L8A9 365 aaPredicted RBP7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 MAMDC2Q7Z304 686 aaPredicted RBP7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 PM20D2Q8IYS1 436 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 SLC22A8Q8TCC7 542 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 CT55Q8WUE5 264 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 TMEM234Q8WY98 164 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 ST8SIA1Q92185 356 aa7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 CNN2Q99439 309 aaKnown RBP7.97□□□□□ -1.13
CDC42SE1-204ENST00000483763 CDCP1Q9H5V8 836 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms