RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 KCNG3Q8TAE7 436 aa17.26■□□□□ 0.35
SHANK3-203ENST00000445220 PIAS3Q9Y6X2 628 aa17.26■□□□□ 0.35
SHANK3-203ENST00000445220 MYO10Q9HD67 2058 aa17.26■□□□□ 0.35
SHANK3-203ENST00000445220 PPP5D1E7EU14 171 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 ACTL6BO94805 426 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 CPEP16870 476 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 NAGAP17050 411 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 HNRNPA2B1P22626 353 aaKnown RBP17.25■□□□□ 0.35
SHANK3-203ENST00000445220 CD80P33681 288 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 CLINT1Q14677 625 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 CLPPQ16740 277 aaPredicted RBP17.25■□□□□ 0.35
SHANK3-203ENST00000445220 FAM3DQ96BQ1 224 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 TEX37Q96LM6 180 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 RTP3Q9BQQ7 232 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 LOC100289279A0A1B0GTE1 492 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 CEBPZOSA8MTT3 80 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 SYT5O00445 386 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 SMAD6O43541 496 aaKnown RBP17.25■□□□□ 0.35
SHANK3-203ENST00000445220 SEMA4FO95754 770 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 KITLGP21583 273 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 HIST1H1TP22492 207 aaPredicted RBP17.25■□□□□ 0.35
SHANK3-203ENST00000445220 C1orf61Q13536 156 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 CCNJQ5T5M9 372 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 OPN5Q6U736 354 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 OVCH1Q7RTY7 1134 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 FAM58AQ8N1B3 248 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 PRR18Q8N4B5 295 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 DEFB119Q8N690 84 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 L3MBTL4Q8NA19 623 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 KCMF1Q9P0J7 381 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 NHSL1Q5SYE7 1610 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 TRAV20A0A0B4J274 112 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 HMX2A2RU54 273 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 ZNF587BE7ETH6 402 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 ZP3P21754 424 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 HLA-FP30511 346 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 FOXK2Q01167 660 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 PLXDC1Q8IUK5 500 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 OR14L1PQ8NHC6 308 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 APH1BQ8WW43 257 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 DAZAP1Q96EP5 407 aaKnown RBP17.25■□□□□ 0.35
SHANK3-203ENST00000445220 KATNB1Q9BVA0 655 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 GABARAPL3Q9BY60 117 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 ISYNA1Q9NPH2 558 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 ADAM29Q9UKF5 820 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 C17orf112F2Z3M2 114 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 MBP02144 154 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 ZNF28P17035 718 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 PTGER1P34995 402 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 OR2B8PP59922 312 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 CRMP1Q14194 572 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 MR1Q95460 341 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 PAPOLGQ9BWT3 736 aaKnown RBP17.25■□□□□ 0.35
SHANK3-203ENST00000445220 SPACA1Q9HBV2 294 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 A4GALTQ9NPC4 353 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 ASIC5Q9NY37 505 aa17.25■□□□□ 0.35
SHANK3-203ENST00000445220 UMAD1C9J7I0 102 aa17.24■□□□□ 0.35
SHANK3-203ENST00000445220 RGS11O94810 467 aa17.24■□□□□ 0.35
SHANK3-203ENST00000445220 RD3LP0DJH9 198 aa17.24■□□□□ 0.35
SHANK3-203ENST00000445220 TGM1P22735 817 aa17.24■□□□□ 0.35
SHANK3-203ENST00000445220 TGFBR1P36897 503 aa17.24■□□□□ 0.35
SHANK3-203ENST00000445220 EVX1P49640 407 aa17.24■□□□□ 0.35
SHANK3-203ENST00000445220 SFRP5Q5T4F7 317 aa17.24■□□□□ 0.35
SHANK3-203ENST00000445220 MRPL2Q5T653 305 aaKnown RBP17.24■□□□□ 0.35
SHANK3-203ENST00000445220 CD300LGQ6UXG3 332 aa17.24■□□□□ 0.35
SHANK3-203ENST00000445220 SELENOIQ9C0D9 397 aa17.24■□□□□ 0.35
SHANK3-203ENST00000445220 LINC00597Q9H2U6 94 aa17.24■□□□□ 0.35
SHANK3-203ENST00000445220 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.24■□□□□ 0.35
SHANK3-203ENST00000445220 HOXA9P31269 272 aa17.24■□□□□ 0.35
SHANK3-203ENST00000445220 SYT14P1Q58G82 188 aa17.24■□□□□ 0.35
SHANK3-203ENST00000445220 TRNP1Q6NT89 227 aa17.24■□□□□ 0.35
SHANK3-203ENST00000445220 KIAA0907Q7Z7F0 614 aaPredicted RBP17.24■□□□□ 0.35
SHANK3-203ENST00000445220 TSACCQ96A04 125 aaPredicted RBP17.24■□□□□ 0.35
SHANK3-203ENST00000445220 CHRDQ9H2X0 955 aa17.24■□□□□ 0.35
SHANK3-203ENST00000445220 THBS3P49746 956 aa17.24■□□□□ 0.35
SHANK3-203ENST00000445220 NTHL1P78549 312 aa17.24■□□□□ 0.35
SHANK3-203ENST00000445220 DGCR2P98153 550 aa17.24■□□□□ 0.35
SHANK3-203ENST00000445220 OR52I2Q8NH67 350 aa17.24■□□□□ 0.35
SHANK3-203ENST00000445220 DTD2Q96FN9 168 aa17.24■□□□□ 0.35
SHANK3-203ENST00000445220 ZNF75AQ96N20 296 aa17.24■□□□□ 0.35
SHANK3-203ENST00000445220 TUBB1Q9H4B7 451 aa17.24■□□□□ 0.35
SHANK3-203ENST00000445220 PRAMEF27A3QJZ7 478 aa17.24■□□□□ 0.35
SHANK3-203ENST00000445220 LGALS8O00214 317 aa17.24■□□□□ 0.35
SHANK3-203ENST00000445220 BCKDHBP21953 392 aa17.24■□□□□ 0.35
SHANK3-203ENST00000445220 RFX2P48378 723 aa17.24■□□□□ 0.35
SHANK3-203ENST00000445220 VASPP50552 380 aaPredicted RBP17.24■□□□□ 0.35
SHANK3-203ENST00000445220 HHEXQ03014 270 aa17.24■□□□□ 0.35
SHANK3-203ENST00000445220 ALKBH1Q13686 389 aaKnown RBP17.24■□□□□ 0.35
SHANK3-203ENST00000445220 ATPAF1Q5TC12 328 aaPredicted RBP17.24■□□□□ 0.35
SHANK3-203ENST00000445220 PRAMEF9Q5VWM5 478 aa17.24■□□□□ 0.35
SHANK3-203ENST00000445220 TMPRSS7Q7RTY8 843 aa17.24■□□□□ 0.35
SHANK3-203ENST00000445220 SRRQ9GZT4 340 aa17.24■□□□□ 0.35
SHANK3-203ENST00000445220 GON4LQ3T8J9 2241 aa17.23■□□□□ 0.35
SHANK3-203ENST00000445220 NSDHLQ15738 373 aa17.23■□□□□ 0.35
SHANK3-203ENST00000445220 XKR7Q5GH72 579 aa17.23■□□□□ 0.35
SHANK3-203ENST00000445220 TMEM88Q6PEY1 159 aa17.23■□□□□ 0.35
SHANK3-203ENST00000445220 PAQR9Q6ZVX9 377 aa17.23■□□□□ 0.35
SHANK3-203ENST00000445220 ZNF100Q8IYN0 542 aa17.23■□□□□ 0.35
SHANK3-203ENST00000445220 TMED6Q8WW62 240 aa17.23■□□□□ 0.35
SHANK3-203ENST00000445220 TOX2Q96NM4 488 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms