RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 FBXO42Q6P3S6 717 aa13.33□□□□□ -0.27
CHRD-204ENST00000420973 SHISA6Q6ZSJ9 500 aa13.33□□□□□ -0.27
CHRD-204ENST00000420973 COMTD1Q86VU5 262 aa13.33□□□□□ -0.27
CHRD-204ENST00000420973 SMRP1Q8NCR6 262 aa13.33□□□□□ -0.27
CHRD-204ENST00000420973 NEURL3Q96EH8 262 aa13.33□□□□□ -0.27
CHRD-204ENST00000420973 NEU1Q99519 415 aa13.33□□□□□ -0.27
CHRD-204ENST00000420973 PLCXD1Q9NUJ7 323 aa13.33□□□□□ -0.27
CHRD-204ENST00000420973 ING1Q9UK53 422 aaPredicted RBP13.33□□□□□ -0.27
CHRD-204ENST00000420973 PRAMEF27A3QJZ7 478 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 MAN2B1O00754 1011 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 PEPDP12955 493 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 ANXA8P13928 327 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 GABRA1P14867 456 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 KHKP50053 298 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 GABREP78334 506 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 ZNF155Q12901 538 aaPredicted RBP13.33□□□□□ -0.28
CHRD-204ENST00000420973 KCNAB1Q14722 419 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 TCTN3Q6NUS6 607 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 SLC22A18ASQ8N1D0 253 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 ZNF687Q8N1G0 1237 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 OR4K5Q8NGD3 323 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 OR4K14Q8NGD5 310 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 OR7D2Q96RA2 312 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 TBX5Q99593 518 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 POLDIP3Q9BY77 421 aaKnown RBP13.33□□□□□ -0.28
CHRD-204ENST00000420973 WDR45Q9Y484 360 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 HEBP2Q9Y5Z4 205 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 UBE2CO00762 179 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 RRP8O43159 456 aaKnown RBP13.33□□□□□ -0.28
CHRD-204ENST00000420973 PMP2P02689 132 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 CLUP10909 449 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 ABCD3P28288 659 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 DDTP30046 118 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 RIPPLY1Q0D2K3 151 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 RUNX2Q13950 521 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 DOC2BQ14184 412 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 CDPF1Q6NVV7 123 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 ADAM5Q6NVV9 412 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 CLEC2AQ6UVW9 174 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 COX18Q8N8Q8 333 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 OR7G2Q8NG99 324 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 RAB3CQ96E17 227 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 WDR34Q96EX3 536 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 FAM46AQ96IP4 442 aaKnown RBP13.33□□□□□ -0.28
CHRD-204ENST00000420973 GABRG3Q99928 467 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 EGLN3Q9H6Z9 239 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 FAM60AQ9NP50 221 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 ZNF226Q9NYT6 803 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 MTCH2Q9Y6C9 303 aa13.33□□□□□ -0.28
CHRD-204ENST00000420973 NPIPB8E9PQR5 432 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 FFAR1O14842 300 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 FUT1P19526 365 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 ITGA3P26006 1051 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 PDX1P52945 283 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 RNF165Q6ZSG1 346 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 NRROSQ86YC3 692 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 ZFYVE21Q9BQ24 234 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 TMED9Q9BVK6 235 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 FBXO34Q9NWN3 711 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 GPR55Q9Y2T6 319 aaPredicted RBP13.32□□□□□ -0.28
CHRD-204ENST00000420973 SPACA6W5XKT8 324 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 ALPK3Q96L96 1907 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 SLC34A2O95436 690 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 APBB3O95704 486 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 DCNP07585 359 aaKnown RBP13.32□□□□□ -0.28
CHRD-204ENST00000420973 ACHEP22303 614 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 FAM189A2Q15884 450 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 HEPHL1Q6MZM0 1159 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 PODNL1Q6PEZ8 512 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 TSSK4Q6SA08 328 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 UNQ6494/PRO21346Q6UXR6 183 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 SAMD12Q8N8I0 201 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 HSPA12BQ96MM6 686 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 KLHL28Q9NXS3 571 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 RTTNQ86VV8 2226 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 A0A0A6YYD5 115 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 TMEM218A2RU14 115 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 SUSD5O60279 629 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 CYTIPO60759 359 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 CPMP14384 443 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 SEC61A1P61619 476 aaKnown RBP13.32□□□□□ -0.28
CHRD-204ENST00000420973 AGERQ15109 404 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 RSU1Q15404 277 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 GSG1Q2KHT4 349 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 POMGNT2Q8NAT1 580 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 DENND6BQ8NEG7 585 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 PITX2Q99697 317 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 TCF7L1Q9HCS4 588 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 ZNF629Q9UEG4 869 aaPredicted RBP13.32□□□□□ -0.28
CHRD-204ENST00000420973 MMP17Q9ULZ9 603 aa13.32□□□□□ -0.28
CHRD-204ENST00000420973 TMEM72A0PK05 275 aa13.31□□□□□ -0.28
CHRD-204ENST00000420973 TLR4O00206 839 aa13.31□□□□□ -0.28
CHRD-204ENST00000420973 HPP00738 406 aa13.31□□□□□ -0.28
CHRD-204ENST00000420973 ADRA2AP08913 450 aa13.31□□□□□ -0.28
CHRD-204ENST00000420973 HOXA6P31267 233 aa13.31□□□□□ -0.28
CHRD-204ENST00000420973 GABRA3P34903 492 aa13.31□□□□□ -0.28
CHRD-204ENST00000420973 ZP1P60852 638 aa13.31□□□□□ -0.28
CHRD-204ENST00000420973 GMFBP60983 142 aa13.31□□□□□ -0.28
CHRD-204ENST00000420973 RPS25P62851 125 aaKnown RBP13.31□□□□□ -0.28
CHRD-204ENST00000420973 SNTB2Q13425 540 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms