RNA–Protein interactions for RNA: ENST00000393164.6

ATP2B1-203, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2B1, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-203ENST00000393164 SLC29A1Q99808 456 aa3.16□□□□□ -1.9
ATP2B1-203ENST00000393164 VKORC1Q9BQB6 163 aa3.16□□□□□ -1.9
ATP2B1-203ENST00000393164 ALG12Q9BV10 488 aa3.16□□□□□ -1.9
ATP2B1-203ENST00000393164 GRIP2Q9C0E4 1043 aa3.16□□□□□ -1.9
ATP2B1-203ENST00000393164 FN3KQ9H479 309 aa3.16□□□□□ -1.9
ATP2B1-203ENST00000393164 EGLN3Q9H6Z9 239 aa3.16□□□□□ -1.9
ATP2B1-203ENST00000393164 BCO1Q9HAY6 547 aa3.16□□□□□ -1.9
ATP2B1-203ENST00000393164 MCCC2Q9HCC0 563 aa3.16□□□□□ -1.9
ATP2B1-203ENST00000393164 NRIP3Q9NQ35 241 aa3.16□□□□□ -1.9
ATP2B1-203ENST00000393164 FAM118AQ9NWS6 357 aa3.16□□□□□ -1.9
ATP2B1-203ENST00000393164 TAS2R5Q9NYW4 299 aa3.16□□□□□ -1.9
ATP2B1-203ENST00000393164 COQ3Q9NZJ6 369 aa3.16□□□□□ -1.9
ATP2B1-203ENST00000393164 KLHL13Q9P2N7 655 aa3.16□□□□□ -1.9
ATP2B1-203ENST00000393164 TMEFF2Q9UIK5 374 aaPredicted RBP3.16□□□□□ -1.9
ATP2B1-203ENST00000393164 BLOC1S6Q9UL45 172 aa3.16□□□□□ -1.9
ATP2B1-203ENST00000393164 IER3IP1Q9Y5U9 82 aa3.16□□□□□ -1.9
ATP2B1-203ENST00000393164 AKAP13Q12802 2813 aa3.16□□□□□ -1.9
ATP2B1-203ENST00000393164 IRGMA1A4Y4 181 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 MBD3L4A6NDZ8 208 aaPredicted RBP3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 MBD3L3A6NE82 208 aaPredicted RBP3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 MBD3L5A6NJ08 208 aaPredicted RBP3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 ZAR1LA6NP61 321 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 B8ZZF3 427 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 LRRN3E7EW58 273 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 PRR23D1E9PI22 279 aaPredicted RBP3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 DVL2O14641 736 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 CNOT4O95628 575 aaKnown RBP3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 PPP1R3DO95685 299 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 SNAP29O95721 258 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 TXNDC12O95881 172 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 F13BP05160 661 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 TSPAN19P0C672 248 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 PRR23D2P0DMB1 279 aaPredicted RBP3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 IFNGR1P15260 489 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 GGT2P36268 569 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 ACVR1BP36896 505 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 CSNK1A1P48729 337 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 PCYT1AP49585 367 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 ZNF84P51523 738 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 AQP4P55087 323 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 MLLT10P55197 1068 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 CLDN17P56750 224 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 ERVK-25P63136 954 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 IL5RAQ01344 420 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 TGFBR3Q03167 851 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 LTBQ06643 244 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 CD47Q08722 323 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 SLC17A1Q14916 467 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 ACKR1Q16570 336 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 THEM4Q5T1C6 240 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 RIPPLY2Q5TAB7 128 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 Q6ZPB1 254 aaPredicted RBP3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 CREB3L2Q70SY1 520 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 FAM214BQ7L5A3 538 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 MBD3L2Q8NHZ7 208 aaPredicted RBP3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 ROBO4Q8WZ75 1007 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 RND1Q92730 232 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 RELTQ969Z4 430 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 DNAJA3Q96EY1 480 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 MRPL48Q96GC5 212 aaKnown RBP3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 ZNF845Q96IR2 970 aaPredicted RBP3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 LRR1Q96L50 414 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 SFXN3Q9BWM7 321 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 SRXN1Q9BYN0 137 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 CMC2Q9NRP2 79 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 PNPLA3Q9NST1 481 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 CLN6Q9NWW5 311 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 TVP23BQ9NYZ1 205 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 CLCF1Q9UBD9 225 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 TNFRSF10DQ9UBN6 386 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 UPB1Q9UBR1 384 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 REV1Q9UBZ9 1251 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 ZNF835Q9Y2P0 537 aa3.15□□□□□ -1.9
ATP2B1-203ENST00000393164 TNRC6AQ8NDV7 1962 aaKnown RBP3.15□□□□□ -1.91
ATP2B1-203ENST00000393164 IGHV3-15A0A0B4J1V0 119 aa3.15□□□□□ -1.91
ATP2B1-203ENST00000393164 TEX13CA0A0J9YWL9 993 aa3.15□□□□□ -1.91
ATP2B1-203ENST00000393164 SLC22A31A6NKX4 558 aa3.15□□□□□ -1.91
ATP2B1-203ENST00000393164 ZNF587BE7ETH6 402 aa3.15□□□□□ -1.91
ATP2B1-203ENST00000393164 H0YC42 278 aa3.15□□□□□ -1.91
ATP2B1-203ENST00000393164 MS4A18H0YCH9 400 aa3.15□□□□□ -1.91
ATP2B1-203ENST00000393164 BHLHE40O14503 412 aa3.15□□□□□ -1.91
ATP2B1-203ENST00000393164 ARHGEF9O43307 516 aa3.15□□□□□ -1.91
ATP2B1-203ENST00000393164 MITFO75030 526 aaPredicted RBP3.15□□□□□ -1.91
ATP2B1-203ENST00000393164 TMCC2O75069 709 aa3.15□□□□□ -1.91
ATP2B1-203ENST00000393164 SS18L1O75177 396 aaPredicted RBP3.15□□□□□ -1.91
ATP2B1-203ENST00000393164 IL18BPO95998 194 aa3.15□□□□□ -1.91
ATP2B1-203ENST00000393164 TMIGD3P0DMS9 266 aaPredicted RBP3.15□□□□□ -1.91
ATP2B1-203ENST00000393164 PAX7P23759 505 aa3.15□□□□□ -1.91
ATP2B1-203ENST00000393164 HOXC12P31275 282 aa3.15□□□□□ -1.91
ATP2B1-203ENST00000393164 ATP6V1E1P36543 226 aa3.15□□□□□ -1.91
ATP2B1-203ENST00000393164 CA7P43166 264 aa3.15□□□□□ -1.91
ATP2B1-203ENST00000393164 SH3BGRP55822 239 aaPredicted RBP3.15□□□□□ -1.91
ATP2B1-203ENST00000393164 BIDP55957 195 aa3.15□□□□□ -1.91
ATP2B1-203ENST00000393164 LSM11P83369 360 aaKnown RBP eCLIP3.15□□□□□ -1.91
ATP2B1-203ENST00000393164 CDK5Q00535 292 aa3.15□□□□□ -1.91
ATP2B1-203ENST00000393164 TEKQ02763 1124 aa3.15□□□□□ -1.91
ATP2B1-203ENST00000393164 GLO1Q04760 184 aa3.15□□□□□ -1.91
ATP2B1-203ENST00000393164 POU4F2Q12837 409 aa3.15□□□□□ -1.91
ATP2B1-203ENST00000393164 TMED1Q13445 227 aa3.15□□□□□ -1.91
ATP2B1-203ENST00000393164 MS4A18Q3C1V0 323 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms