RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 SNTA1Q13424 505 aa23.03■■□□□ 1.28
C9orf40-201ENST00000376854 ALKBH1Q13686 389 aaKnown RBP23.03■■□□□ 1.28
C9orf40-201ENST00000376854 LRRC75AQ8NAA5 344 aa23.03■■□□□ 1.28
C9orf40-201ENST00000376854 SRA1Q9HD15 236 aaKnown RBP23.03■■□□□ 1.28
C9orf40-201ENST00000376854 FRRS1LQ9P0K9 344 aa23.03■■□□□ 1.28
C9orf40-201ENST00000376854 FKBP7Q9Y680 259 aa23.03■■□□□ 1.28
C9orf40-201ENST00000376854 ARPC1BO15143 372 aaKnown RBP23.03■■□□□ 1.28
C9orf40-201ENST00000376854 SRPX2O60687 465 aaPredicted RBP23.03■■□□□ 1.28
C9orf40-201ENST00000376854 F13BP05160 661 aa23.03■■□□□ 1.28
C9orf40-201ENST00000376854 ATXN8OSP0DMR3 200 aa23.03■■□□□ 1.28
C9orf40-201ENST00000376854 PTHLHP12272 177 aa23.03■■□□□ 1.28
C9orf40-201ENST00000376854 HPGDP15428 266 aa23.03■■□□□ 1.28
C9orf40-201ENST00000376854 SDHAP31040 664 aa23.03■■□□□ 1.28
C9orf40-201ENST00000376854 LTBRP36941 435 aa23.03■■□□□ 1.28
C9orf40-201ENST00000376854 METTL11BQ5VVY1 283 aa23.03■■□□□ 1.28
C9orf40-201ENST00000376854 SEZ6L2Q6UXD5 910 aa23.03■■□□□ 1.28
C9orf40-201ENST00000376854 RFPL4BQ6ZWI9 263 aa23.03■■□□□ 1.28
C9orf40-201ENST00000376854 MED25Q71SY5 747 aa23.03■■□□□ 1.28
C9orf40-201ENST00000376854 PARGQ86W56 976 aa23.03■■□□□ 1.28
C9orf40-201ENST00000376854 METTL27Q8N6F8 245 aaPredicted RBP23.03■■□□□ 1.28
C9orf40-201ENST00000376854 FAM71CQ8NEG0 241 aa23.03■■□□□ 1.28
C9orf40-201ENST00000376854 HAVCR1Q96D42 359 aa23.03■■□□□ 1.28
C9orf40-201ENST00000376854 CCNL2Q96S94 520 aaPredicted RBP23.03■■□□□ 1.28
C9orf40-201ENST00000376854 SLC6A5Q9Y345 797 aa23.03■■□□□ 1.28
C9orf40-201ENST00000376854 SPTY2D1-AS1A0A0U1RR47 76 aa23.02■■□□□ 1.28
C9orf40-201ENST00000376854 APEHP13798 732 aaKnown RBP23.02■■□□□ 1.28
C9orf40-201ENST00000376854 CDK2P24941 298 aa23.02■■□□□ 1.28
C9orf40-201ENST00000376854 MAPK3P27361 379 aaPredicted RBP23.02■■□□□ 1.28
C9orf40-201ENST00000376854 P2RX1P51575 399 aa23.02■■□□□ 1.28
C9orf40-201ENST00000376854 ART1P52961 327 aa23.02■■□□□ 1.28
C9orf40-201ENST00000376854 RPS15P62841 145 aaKnown RBP23.02■■□□□ 1.28
C9orf40-201ENST00000376854 FZD2Q14332 565 aa23.02■■□□□ 1.28
C9orf40-201ENST00000376854 PHOSPHO1Q8TCT1 267 aa23.02■■□□□ 1.28
C9orf40-201ENST00000376854 ADAMTS18Q8TE60 1221 aa23.02■■□□□ 1.28
C9orf40-201ENST00000376854 LIPHQ8WWY8 451 aa23.02■■□□□ 1.28
C9orf40-201ENST00000376854 MMP25Q9NPA2 562 aa23.02■■□□□ 1.28
C9orf40-201ENST00000376854 HEATR5AQ86XA9 2040 aa23.02■■□□□ 1.28
C9orf40-201ENST00000376854 A0A1B0GUH1 482 aa23.02■■□□□ 1.28
C9orf40-201ENST00000376854 ANKRD20A5PA0PJZ0 165 aa23.02■■□□□ 1.28
C9orf40-201ENST00000376854 ICMTO60725 284 aa23.02■■□□□ 1.28
C9orf40-201ENST00000376854 NSA2O95478 260 aaKnown RBP23.02■■□□□ 1.28
C9orf40-201ENST00000376854 MPC2O95563 127 aa23.02■■□□□ 1.28
C9orf40-201ENST00000376854 UBL4AP11441 157 aa23.02■■□□□ 1.28
C9orf40-201ENST00000376854 LCN1P31025 176 aa23.02■■□□□ 1.28
C9orf40-201ENST00000376854 BLVRAP53004 296 aa23.02■■□□□ 1.28
C9orf40-201ENST00000376854 IKZF1Q13422 519 aa23.02■■□□□ 1.28
C9orf40-201ENST00000376854 MMABQ96EY8 250 aaPredicted RBP23.02■■□□□ 1.28
C9orf40-201ENST00000376854 TAS2R10Q9NYW0 307 aa23.02■■□□□ 1.28
C9orf40-201ENST00000376854 PRODH2Q9UF12 536 aa23.02■■□□□ 1.28
C9orf40-201ENST00000376854 G3V3Q6 166 aa23.01■■□□□ 1.27
C9orf40-201ENST00000376854 MEN1O00255 615 aa23.01■■□□□ 1.27
C9orf40-201ENST00000376854 DCTN6O00399 190 aa23.01■■□□□ 1.27
C9orf40-201ENST00000376854 IGF2P01344 180 aa23.01■■□□□ 1.27
C9orf40-201ENST00000376854 ADRA2CP18825 462 aa23.01■■□□□ 1.27
C9orf40-201ENST00000376854 MRPS10P82664 201 aaKnown RBP23.01■■□□□ 1.27
C9orf40-201ENST00000376854 FNDC7Q5VTL7 733 aa23.01■■□□□ 1.27
C9orf40-201ENST00000376854 SLC25A25Q6KCM7 469 aa23.01■■□□□ 1.27
C9orf40-201ENST00000376854 CBLN3Q6UW01 205 aa23.01■■□□□ 1.27
C9orf40-201ENST00000376854 MIB2Q96AX9 1013 aa23.01■■□□□ 1.27
C9orf40-201ENST00000376854 RADILQ96JH8 1075 aa23.01■■□□□ 1.27
C9orf40-201ENST00000376854 NOX3Q9HBY0 568 aa23.01■■□□□ 1.27
C9orf40-201ENST00000376854 UBQLN4Q9NRR5 601 aa23.01■■□□□ 1.27
C9orf40-201ENST00000376854 TDRD6O60522 2096 aaKnown RBP23.01■■□□□ 1.27
C9orf40-201ENST00000376854 TVP23AA6NH52 213 aa23■■□□□ 1.27
C9orf40-201ENST00000376854 H7C1C5 153 aa23■■□□□ 1.27
C9orf40-201ENST00000376854 IFNA7P01567 189 aa23■■□□□ 1.27
C9orf40-201ENST00000376854 CLPSP04118 112 aa23■■□□□ 1.27
C9orf40-201ENST00000376854 THEGLP0DJG4 465 aa23■■□□□ 1.27
C9orf40-201ENST00000376854 LCN6P62502 163 aa23■■□□□ 1.27
C9orf40-201ENST00000376854 SKP2Q13309 424 aa23■■□□□ 1.27
C9orf40-201ENST00000376854 EXOSC2Q13868 293 aaKnown RBP23■■□□□ 1.27
C9orf40-201ENST00000376854 RAB30Q15771 203 aa23■■□□□ 1.27
C9orf40-201ENST00000376854 TOR2AQ5JU69 321 aa23■■□□□ 1.27
C9orf40-201ENST00000376854 OLFML2AQ68BL7 652 aa23■■□□□ 1.27
C9orf40-201ENST00000376854 DND1Q8IYX4 353 aaKnown RBP23■■□□□ 1.27
C9orf40-201ENST00000376854 ZSCAN1Q8NBB4 408 aa23■■□□□ 1.27
C9orf40-201ENST00000376854 SUN5Q8TC36 379 aa23■■□□□ 1.27
C9orf40-201ENST00000376854 MAP3K3Q99759 626 aa23■■□□□ 1.27
C9orf40-201ENST00000376854 GRHPRQ9UBQ7 328 aa23■■□□□ 1.27
C9orf40-201ENST00000376854 AUP1Q9Y679 476 aa23■■□□□ 1.27
C9orf40-201ENST00000376854 ABHD16AO95870 558 aa23■■□□□ 1.27
C9orf40-201ENST00000376854 RAD52P43351 418 aa23■■□□□ 1.27
C9orf40-201ENST00000376854 EGR4Q05215 589 aa23■■□□□ 1.27
C9orf40-201ENST00000376854 POU4F3Q15319 338 aa23■■□□□ 1.27
C9orf40-201ENST00000376854 GPR139Q6DWJ6 353 aa23■■□□□ 1.27
C9orf40-201ENST00000376854 FAAP20Q6NZ36 180 aa23■■□□□ 1.27
C9orf40-201ENST00000376854 CDC20BQ86Y33 519 aa23■■□□□ 1.27
C9orf40-201ENST00000376854 OR6V1Q8N148 313 aa23■■□□□ 1.27
C9orf40-201ENST00000376854 DNAAF1Q8NEP3 725 aa23■■□□□ 1.27
C9orf40-201ENST00000376854 OR2T4Q8NH00 348 aa23■■□□□ 1.27
C9orf40-201ENST00000376854 LPAR4Q99677 370 aa23■■□□□ 1.27
C9orf40-201ENST00000376854 SEC22CQ9BRL7 303 aa23■■□□□ 1.27
C9orf40-201ENST00000376854 FKRPQ9H9S5 495 aa23■■□□□ 1.27
C9orf40-201ENST00000376854 GLTPQ9NZD2 209 aa23■■□□□ 1.27
C9orf40-201ENST00000376854 IKZF2Q9UKS7 526 aa23■■□□□ 1.27
C9orf40-201ENST00000376854 CYP8B1Q9UNU6 501 aa23■■□□□ 1.27
C9orf40-201ENST00000376854 TRBV5-5A0A0J9YX44 114 aa22.99■■□□□ 1.27
C9orf40-201ENST00000376854 ACOT7O00154 380 aa22.99■■□□□ 1.27
C9orf40-201ENST00000376854 ASAH2BP0C7U1 165 aa22.99■■□□□ 1.27
C9orf40-201ENST00000376854 HSD17B7P56937 341 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms