RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 UBA52P62987 128 aaKnown RBP12.7□□□□□ -0.38
SPAST-201ENST00000315285 RCBTB1Q8NDN9 531 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 NAT6Q93015 286 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 EMC7Q9NPA0 242 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 CMC2Q9NRP2 79 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 EMC9Q9Y3B6 208 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 H0Y8X5 98 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 DPM1O60762 260 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 SULT1C4O75897 302 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 SLC2A10O95528 541 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 HOXB5P09067 269 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 CCR9P51686 369 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 MELKQ14680 651 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 RTL6Q6ICC9 239 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 SGCZQ96LD1 299 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 PPA2Q9H2U2 334 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 CDH20Q9HBT6 801 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 AKIP1Q9NQ31 210 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 FBXL2Q9UKC9 423 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 SMCHD1A6NHR9 2005 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.7□□□□□ -0.38
SPAST-201ENST00000315285 LOC102725191A0A1B0GVB3 256 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 OR5K3A6NET4 321 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 POM121BA6NF01 834 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 SERPINE2P07093 398 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 ELK1P19419 428 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 ARF1P84077 181 aaKnown RBP12.7□□□□□ -0.38
SPAST-201ENST00000315285 MC2RQ01718 297 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 MPEG1Q2M385 716 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 CLVS2Q5SYC1 327 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 PAQR8Q8TEZ7 354 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 S100PBPQ96BU1 408 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 TMEFF2Q9UIK5 374 aaPredicted RBP12.7□□□□□ -0.38
SPAST-201ENST00000315285 HS3ST3A1Q9Y663 406 aa12.7□□□□□ -0.38
SPAST-201ENST00000315285 BCAT2O15382 392 aaPredicted RBP12.69□□□□□ -0.38
SPAST-201ENST00000315285 SCRG1O75711 98 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 PPP3CBP16298 524 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 CCR2P41597 374 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 TPMTP51580 245 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 SLC9A3R2Q15599 337 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 USF2Q15853 346 aaPredicted RBP12.69□□□□□ -0.38
SPAST-201ENST00000315285 PARM1Q6UWI2 310 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 SLC16A9Q7RTY1 509 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 LILRB2Q8N423 598 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 OR4K15Q8NH41 348 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 C20orf85Q9H1P6 137 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 FGF21Q9NSA1 209 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 STEAP1Q9UHE8 339 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 MAP1BP46821 2468 aaKnown RBP12.69□□□□□ -0.38
SPAST-201ENST00000315285 COL4A1P02462 1669 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 FGF17O60258 216 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 HSD17B7P56937 341 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 C17orf67Q0P5P2 114 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 DUSP8Q13202 625 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 ZNF679Q8IYX0 411 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 STK35Q8TDR2 534 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 PCNPQ8WW12 178 aaKnown RBP12.69□□□□□ -0.38
SPAST-201ENST00000315285 TMEM59Q9BXS4 323 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 A0A0D9SG52 128 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 TSPAN11A1L157 253 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 RFXAPO00287 272 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 ATG12O94817 140 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 RAC2P15153 192 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 CX3CR1P49238 355 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 MRPL19P49406 292 aaKnown RBP12.69□□□□□ -0.38
SPAST-201ENST00000315285 BTG1P62324 171 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 SF3B4Q15427 424 aaKnown RBP eCLIP12.69□□□□□ -0.38
SPAST-201ENST00000315285 STEAP1BQ6NZ63 245 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 ZNF529Q6P280 563 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 RFPL4BQ6ZWI9 263 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 CREB3L2Q70SY1 520 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 ZNF683Q8IZ20 524 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 SPNS1Q9H2V7 528 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 EDARQ9UNE0 448 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 SULT1B1O43704 296 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 DBHP09172 617 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 EPHA1P21709 976 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 SRP9P49458 86 aaKnown RBP12.69□□□□□ -0.38
SPAST-201ENST00000315285 TAS2R46P59540 309 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 GPR176Q14439 515 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 CTF1Q16619 201 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 LHX8Q68G74 356 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 NIPAL3Q6P499 406 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 LINC00346Q8IVM7 164 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 OR56B1Q8NGI3 324 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 FAM3DQ96BQ1 224 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 LINC00615Q96LM1 132 aaPredicted RBP12.69□□□□□ -0.38
SPAST-201ENST00000315285 FYTTD1Q96QD9 318 aaKnown RBP12.69□□□□□ -0.38
SPAST-201ENST00000315285 SLC25A19Q9HC21 320 aa12.69□□□□□ -0.38
SPAST-201ENST00000315285 CACNA1CQ13936 2221 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 C1orf196B1AJZ1 125 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 POU3F2P20265 443 aaPredicted RBP12.68□□□□□ -0.38
SPAST-201ENST00000315285 TAS2R20P59543 309 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 S100A12P80511 92 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 HTR4Q13639 388 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 EXOSC6Q5RKV6 272 aaKnown RBP12.68□□□□□ -0.38
SPAST-201ENST00000315285 MSRB3Q8IXL7 192 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 ACOXLQ9NUZ1 547 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 TBX21Q9UL17 535 aa12.68□□□□□ -0.38
SPAST-201ENST00000315285 DOCK1Q14185 1865 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms