RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 LSM14AQ8ND56 463 aaKnown RBP13.87□□□□□ -0.19
DDX56-201ENST00000258772 MMP25Q9NPA2 562 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 AUP1Q9Y679 476 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 USP34Q70CQ2 3546 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 SPTBN5Q9NRC6 3674 aaKnown RBP13.87□□□□□ -0.19
DDX56-201ENST00000258772 A0A1B0GUH1 482 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 ANKRD20A5PA0PJZ0 165 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 C10orf142B7Z368 130 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 DCTN6O00399 190 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 ARPC1BO15143 372 aaKnown RBP13.87□□□□□ -0.19
DDX56-201ENST00000258772 OIP5O43482 229 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 NSA2O95478 260 aaKnown RBP13.87□□□□□ -0.19
DDX56-201ENST00000258772 MPC2O95563 127 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 ABHD16AO95870 558 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 CLPSP04118 112 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 F13BP05160 661 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 PTHLHP12272 177 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 ADRA2CP18825 462 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 CDK2P24941 298 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 SDHAP31040 664 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 ADH7P40394 386 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 P2RX1P51575 399 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 ART1P52961 327 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 RPS15P62841 145 aaKnown RBP13.87□□□□□ -0.19
DDX56-201ENST00000258772 RPL6Q02878 288 aaKnown RBP13.87□□□□□ -0.19
DDX56-201ENST00000258772 SNTA1Q13424 505 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 HTR4Q13639 388 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 FZD2Q14332 565 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 FNDC7Q5VTL7 733 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 CBLN3Q6UW01 205 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 ZDHHC1Q8WTX9 485 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 HMGB4Q8WW32 186 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 PIGKQ92643 395 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 MIB2Q96AX9 1013 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 SLITRK2Q9H156 845 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 CLEC4MQ9H2X3 399 aaPredicted RBP13.87□□□□□ -0.19
DDX56-201ENST00000258772 NPDC1Q9NQX5 325 aaPredicted RBP13.87□□□□□ -0.19
DDX56-201ENST00000258772 SLC6A5Q9Y345 797 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 TMEM131Q92545 1883 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 ICMTO60725 284 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 TOXO94900 526 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 ASAH2BP0C7U1 165 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 MAPK3P27361 379 aaPredicted RBP13.86□□□□□ -0.19
DDX56-201ENST00000258772 LCN1P31025 176 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 SOX2P48431 317 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 CCR4P51679 360 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 BLVRAP53004 296 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 MRPS10P82664 201 aaKnown RBP13.86□□□□□ -0.19
DDX56-201ENST00000258772 EGR4Q05215 589 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 LTBQ06643 244 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 GPR139Q6DWJ6 353 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 PARGQ86W56 976 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 CDC20BQ86Y33 519 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 DND1Q8IYX4 353 aaKnown RBP13.86□□□□□ -0.19
DDX56-201ENST00000258772 OR6V1Q8N148 313 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 PHOSPHO1Q8TCT1 267 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 NOX3Q9HBY0 568 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 UBQLN4Q9NRR5 601 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 TAS2R10Q9NYW0 307 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 CLEC1BQ9P126 229 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 PRODH2Q9UF12 536 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 TRBV5-5A0A0J9YX44 114 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 A0A1B0GTH9 108 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 MEN1O00255 615 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 IFNA7P01567 189 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 THEGLP0DJG4 465 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 HPGDP15428 266 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 NAT1P18440 290 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 AP2S1P53680 142 aaPredicted RBP13.86□□□□□ -0.19
DDX56-201ENST00000258772 HSD17B7P56937 341 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 DLX2Q07687 328 aaPredicted RBP13.86□□□□□ -0.19
DDX56-201ENST00000258772 SKP2Q13309 424 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 EXOSC2Q13868 293 aaKnown RBP13.86□□□□□ -0.19
DDX56-201ENST00000258772 SHHQ15465 462 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 OLFML2AQ68BL7 652 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 SIGIRRQ6IA17 410 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 METTL27Q8N6F8 245 aaPredicted RBP13.86□□□□□ -0.19
DDX56-201ENST00000258772 ADAMTS18Q8TE60 1221 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 MRPL38Q96DV4 380 aaKnown RBP13.86□□□□□ -0.19
DDX56-201ENST00000258772 MMABQ96EY8 250 aaPredicted RBP13.86□□□□□ -0.19
DDX56-201ENST00000258772 LPAR4Q99677 370 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 MAP3K3Q99759 626 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 NKX2-4Q9H2Z4 354 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 FBXL3Q9UKT7 428 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 FKBP7Q9Y680 259 aa13.86□□□□□ -0.19
DDX56-201ENST00000258772 TVP23AA6NH52 213 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 B4DGG1 531 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 SHOXO15266 292 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 TXNDC12O95881 172 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 UBL4AP11441 157 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 RAD52P43351 418 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 PUDPQ08623 228 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 LRRTM1Q86UE6 522 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 OR2T4Q8NH00 348 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 NSMAFQ92636 917 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 MARVELD3Q96A59 401 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 ZNF524Q96C55 264 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 LCORQ96JN0 433 aaPredicted RBP13.85□□□□□ -0.19
DDX56-201ENST00000258772 FKRPQ9H9S5 495 aa13.85□□□□□ -0.19
DDX56-201ENST00000258772 GLTPQ9NZD2 209 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms