RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Lcn8Q924P3 175 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Sucnr1Q99MT6 317 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Tex46Q9CPU3 165 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 P2ry12Q9CPV9 347 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Ier3ip1Q9CR20 82 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Susd3Q9D176 269 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Six6Q9QZ28 246 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Dennd4cA6H8H2 1906 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Olfr634-ps1A0A1B0GRN7 318 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Vmn1r177E9PXM3 309 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Gm9493F6SVV1 192 aaKnown RBP12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Vmn1r168K7N6B6 309 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Klf9O35739 244 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Lin7bO88951 207 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Cd8aP01731 247 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Tacr1P30548 407 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 FahP35505 419 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Ube2mP61082 183 aaKnown RBP12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 BglapP86546 95 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Bglap2P86547 95 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 DtymkP97930 212 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Obox3Q3UT54 335 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Gm8332Q3UTA4 144 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Spire1Q52KF3 598 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 NovQ64299 354 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 HeltQ7TS99 240 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Pced1bQ8BGX1 433 aaKnown RBP12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Clba1Q8BHN9 321 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Ccdc187Q8C5V8 958 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Eipr1Q8K0G5 386 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Cnppd1Q8K158 407 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Rab38Q8QZZ8 211 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Col26a1Q91VF6 440 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Wdr45Q91VM3 360 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 AldobQ91Y97 364 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Slco1a6Q99J94 670 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 MthfrQ9WU20 654 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 NfkbiaQ9Z1E3 314 aa12.36□□□□□ -0.43
Nup88-201ENSMUST00000035283 Btbd35f23A0A0R4J2B9 498 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Ino80eA0A0U1RP99 260 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Gm28710A0A1B0GR31 962 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Tas2r122D3YU55 309 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 St8sia2O35696 375 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 AanatO88816 205 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Il2raP01590 268 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Igfbp2P47877 305 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 CtdsplP58465 276 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Nup43P59235 380 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 St3gal2Q11204 350 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Zfp987Q32P14 633 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Lrrc28Q3TX51 367 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 ScimpQ3UU41 150 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Slc30a10Q3UVU3 470 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Nrsn2Q5HZK2 202 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Olfr270Q7TS19 314 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Prss34Q80UR4 318 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Gpr137Q80ZU9 396 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Pamr1Q8BU25 720 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Lsm10Q8QZX5 122 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Etv3Q8R4Z4 513 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Mrps16Q9CPX7 135 aaKnown RBP12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Cyp2u1Q9CX98 530 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Senp8Q9D2Z4 221 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Tex33Q9D9J2 266 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Tmem38bQ9DAV9 292 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Htr6Q9R1C8 440 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Mocs2Q9Z223 189 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Igkv16-104A0A0B4J1I1 116 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Spaca5A2AE20 160 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Olfr1193A2AV13 318 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Fam84bD3YXJ5 310 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Zfp712E9PXJ4 705 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Gm7714E9Q079 131 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Kcns1O35173 497 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 NfyaP23708 346 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 PvalbP32848 110 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Pou3f4P62515 361 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Actc1P68033 377 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Acta1P68134 377 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Vmn1r11Q3SXA2 299 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Ankrd37Q569N2 159 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Alkbh2Q6P6J4 239 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Cachd1Q6PDJ1 1288 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Ubfd1Q78JW9 368 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Olfr1349Q7TQV1 317 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Olfr1229Q7TQZ9 311 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Plekhm3Q8BM47 761 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Zc3h10Q8R205 435 aaKnown RBP12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Olfr820Q8VFU5 312 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Asb15Q8VHS6 583 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Mrps14Q9CR88 128 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Dph7Q9CYU6 477 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Lcn9Q9D267 178 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Dgat2Q9DCV3 388 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Psma6Q9QUM9 246 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 PlpbpQ9Z2Y8 274 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Wdfy3Q6VNB8 3508 aa12.35□□□□□ -0.43
Nup88-201ENSMUST00000035283 Igkv12-38A0A0G2JEI7 115 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Gm17949A0A1B0GRV7 212 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Olfr1223A0A1L1SU13 311 aa12.34□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 194.1 ms