RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Mrps15Q9DC71 258 aaKnown RBP15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Slc23a2Q9EPR4 648 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Psma6Q9QUM9 246 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Gm13283A0A087WPG5 182 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Vmn1r82A0A087WRV1 305 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 GdnfP48540 211 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Fam71f1Q3UZD7 341 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Il17rcQ8K4C2 698 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Slc25a28Q8R0Z5 364 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Pttg1ipQ8R143 174 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 SgtbQ8VD33 304 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Olfr683Q8VGV1 319 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 P2ry12Q9CPV9 347 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Q9CRW3 126 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 FopnlQ9CZS3 174 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Exosc7Q9D0M0 291 aaKnown RBP15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 PlpbpQ9Z2Y8 274 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Rnf39A2RT81 352 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Cdc20bD3Z3I0 519 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Olfr427E9Q7E7 315 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Olfr738L7N1X7 311 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 P03987 398 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Zer1Q80ZJ6 779 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Zc3h12dQ8BIY3 533 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Emc1Q8C7X2 997 aaKnown RBP15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 H1fntQ8CJI4 398 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Gfm1Q8K0D5 751 aaKnown RBP15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Tmem185bQ8R3R5 350 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Chrna3Q8R4G9 499 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 NcmapQ99JS0 100 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Tktl1Q99MX0 595 aa15.51■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Nckap5E9QAE1 1909 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Gm2022A0A1Y7VLT7 144 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Slc25a25A2ASZ8 469 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Fam84bD3YXJ5 310 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 En2P09066 324 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 CtnsP57757 367 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 HfeP70387 359 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Gas6Q61592 674 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 SrmsQ62270 496 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Tmem106cQ80VP8 260 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Fbxo34Q80XI1 695 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Trmt12Q8BG71 446 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Hist1h2akQ8CGP7 130 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Cacnb4Q8R0S4 519 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Olfr643Q8VGY1 314 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Tas2r103Q9JKA3 312 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Ceacam16E9QA28 426 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Vmn2r109K7N747 858 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 H2-Q10P01898 325 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 2900092C05RikQ5I0V9 184 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Zfp157Q6PCM4 567 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Them6Q80ZW2 207 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Lancl3Q8CD19 420 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Rhbdl1Q8VC82 373 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Ndc1Q8VCB1 673 aaKnown RBP15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Olfr1414Q8VGU5 312 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Pop7Q9DCH2 140 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Tmem178bM0QWJ9 172 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Fcn1O70165 334 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 ComtO88587 265 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Gabra3P26049 492 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Hmx3P42581 356 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Slc38a8Q5HZH7 432 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Rd3Q8BRE0 195 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Slc25a21Q8BZ09 298 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Olfr970Q8VFN3 311 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Rab28Q99KL7 221 aa15.5■□□□□ 0.07
Ctcf-201ENSMUST00000005841 E030030I06RikJ3QML9 246 aa15.49■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Ccr3P51678 359 aa15.49■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Brf2Q3UAW9 420 aa15.49■□□□□ 0.07
Ctcf-201ENSMUST00000005841 EnkurQ6SP97 255 aa15.49■□□□□ 0.07
Ctcf-201ENSMUST00000005841 2810021J22RikQ8BIB6 539 aa15.49■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Nt5dc2Q91X76 390 aaKnown RBP15.49■□□□□ 0.07
Ctcf-201ENSMUST00000005841 CrtapQ9CYD3 400 aa15.49■□□□□ 0.07
Ctcf-201ENSMUST00000005841 4933436I01RikQ9D3T1 429 aa15.49■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Prg3Q9JL95 222 aa15.49■□□□□ 0.07
Ctcf-201ENSMUST00000005841 TrehQ9JLT2 576 aa15.49■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Dbf4Q9QZ41 663 aa15.49■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Tomm5B1AXP6 51 aa15.49■□□□□ 0.07
Ctcf-201ENSMUST00000005841 IqckD3YYL3 290 aa15.49■□□□□ 0.07
Ctcf-201ENSMUST00000005841 9630041A04RikD3Z3U4 205 aa15.49■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Zfp989H3BLB0 661 aa15.49■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Slc28a2O88627 660 aa15.49■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Sox7P40646 380 aa15.49■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Dlx5P70396 289 aa15.49■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Olfr198Q7TS40 306 aa15.49■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Olfr794Q8VF26 320 aa15.49■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Olfr686Q8VGX3 317 aa15.49■□□□□ 0.07
Ctcf-201ENSMUST00000005841 ShpkQ9D5J6 476 aa15.49■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Cypt12Q9DAR6 119 aa15.49■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Syt8Q9R0N6 395 aa15.49■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Ldlrad3A2AR95 345 aa15.49■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Olfr1156A2AVC3 323 aa15.49■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Hbb-bh2B2RVB7 147 aa15.49■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Pmm1O35621 262 aa15.49■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Wnt11P48615 354 aa15.49■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Actc1P68033 377 aa15.49■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Acta1P68134 377 aa15.49■□□□□ 0.07
Ctcf-201ENSMUST00000005841 Cmklr1P97468 371 aa15.49■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 27.9 ms