RNA–Protein interactions for RNA: ENST00000602888.5

UBE2E3-212, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2

Gene UBE2E3, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-212ENST00000602888 TBX21Q9UL17 535 aa2.88□□□□□ -1.95
UBE2E3-212ENST00000602888 MMP17Q9ULZ9 603 aa2.88□□□□□ -1.95
UBE2E3-212ENST00000602888 FANCIQ9NVI1 1328 aa2.88□□□□□ -1.95
UBE2E3-212ENST00000602888 IGKV2-28A0A075B6P5 120 aa2.87□□□□□ -1.95
UBE2E3-212ENST00000602888 OR5B21A6NL26 309 aa2.87□□□□□ -1.95
UBE2E3-212ENST00000602888 DLGAP1O14490 977 aa2.87□□□□□ -1.95
UBE2E3-212ENST00000602888 SS18L1O75177 396 aaPredicted RBP2.87□□□□□ -1.95
UBE2E3-212ENST00000602888 WISP3O95389 354 aaPredicted RBP2.87□□□□□ -1.95
UBE2E3-212ENST00000602888 IGKV2D-28P01615 120 aa2.87□□□□□ -1.95
UBE2E3-212ENST00000602888 DBTP11182 482 aaKnown RBP2.87□□□□□ -1.95
UBE2E3-212ENST00000602888 ACTA1P68133 377 aa2.87□□□□□ -1.95
UBE2E3-212ENST00000602888 SPIBQ01892 262 aa2.87□□□□□ -1.95
UBE2E3-212ENST00000602888 FGL1Q08830 312 aa2.87□□□□□ -1.95
UBE2E3-212ENST00000602888 NCBP1Q09161 790 aaKnown RBP2.87□□□□□ -1.95
UBE2E3-212ENST00000602888 PDK3Q15120 406 aa2.87□□□□□ -1.95
UBE2E3-212ENST00000602888 EXOC3L2Q2M3D2 409 aa2.87□□□□□ -1.95
UBE2E3-212ENST00000602888 CCDC152Q4G0S7 254 aa2.87□□□□□ -1.95
UBE2E3-212ENST00000602888 PDZK1Q5T2W1 519 aa2.87□□□□□ -1.95
UBE2E3-212ENST00000602888 PLA2G4DQ86XP0 818 aa2.87□□□□□ -1.95
UBE2E3-212ENST00000602888 ZNF540Q8NDQ6 660 aa2.87□□□□□ -1.95
UBE2E3-212ENST00000602888 FGF14Q92915 247 aa2.87□□□□□ -1.95
UBE2E3-212ENST00000602888 ASB9Q96DX5 294 aa2.87□□□□□ -1.95
UBE2E3-212ENST00000602888 CEP170P1Q96L14 293 aa2.87□□□□□ -1.95
UBE2E3-212ENST00000602888 RPRD1AQ96P16 312 aaPredicted RBP2.87□□□□□ -1.95
UBE2E3-212ENST00000602888 ECSITQ9BQ95 431 aa2.87□□□□□ -1.95
UBE2E3-212ENST00000602888 RIOK1Q9BRS2 568 aaKnown RBP2.87□□□□□ -1.95
UBE2E3-212ENST00000602888 ZSCAN5AQ9BUG6 496 aa2.87□□□□□ -1.95
UBE2E3-212ENST00000602888 CAPS2Q9BXY5 557 aa2.87□□□□□ -1.95
UBE2E3-212ENST00000602888 TPK1Q9H3S4 243 aa2.87□□□□□ -1.95
UBE2E3-212ENST00000602888 KCNIP3Q9Y2W7 256 aa2.87□□□□□ -1.95
UBE2E3-212ENST00000602888 COL4A4P53420 1690 aaPredicted RBP2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 OBSCNQ5VST9 7968 aa2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 KIR2DL5BA0A0G2JN68 375 aa2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 KIR2DL5BA0A0G2JPC4 375 aa2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 H0YCG3 227 aa2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 PEX7O00628 323 aa2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 SUPT3HO75486 399 aa2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 MED6O75586 246 aa2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 ALDOBP05062 364 aa2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 OPRD1P41143 372 aa2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 CXCL5P42830 114 aa2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 RPS9P46781 194 aaKnown RBP2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 CCT3P49368 545 aaKnown RBP2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 ERVK-25P63136 954 aa2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 REG3AQ06141 175 aa2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 SMARCB1Q12824 385 aa2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 PDIA2Q13087 525 aaKnown RBP2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 FILIP1LQ4L180 1135 aa2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 ZSCAN25Q6NSZ9 544 aa2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 ECHDC2Q86YB7 292 aa2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 NUDCD3Q8IVD9 361 aa2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 H1FOOQ8IZA3 346 aaPredicted RBP2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 KIR2DL5AQ8N109 375 aa2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 STEAP2Q8NFT2 490 aa2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 OR2G3Q8NGZ4 309 aa2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 KIR2DL5BQ8NHK3 375 aa2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 ZNF596Q8TC21 504 aa2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 MAGEE2Q8TD90 523 aaPredicted RBP2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 STARD8Q92502 1023 aa2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 TAAR1Q96RJ0 339 aa2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 ZFP14Q9HCL3 533 aa2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 POLE4Q9NR33 117 aa2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 CALYQ9NYX4 217 aa2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 PCYOX1Q9UHG3 505 aa2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 NOTCH2Q04721 2471 aa2.86□□□□□ -1.95
UBE2E3-212ENST00000602888 PPIAL4EA0A075B759 164 aa2.85□□□□□ -1.95
UBE2E3-212ENST00000602888 TRAV26-1A0A087WT03 109 aa2.85□□□□□ -1.95
UBE2E3-212ENST00000602888 TOM1O60784 492 aa2.85□□□□□ -1.95
UBE2E3-212ENST00000602888 SNNO75324 88 aaPredicted RBP2.85□□□□□ -1.95
UBE2E3-212ENST00000602888 PPIAL4FP0DN26 164 aa2.85□□□□□ -1.95
UBE2E3-212ENST00000602888 IFNAR2P48551 515 aa2.85□□□□□ -1.95
UBE2E3-212ENST00000602888 MNAT1P51948 309 aa2.85□□□□□ -1.95
UBE2E3-212ENST00000602888 ATP1B3P54709 279 aa2.85□□□□□ -1.95
UBE2E3-212ENST00000602888 CDK16Q00536 496 aa2.85□□□□□ -1.95
UBE2E3-212ENST00000602888 TAF7Q15545 349 aaPredicted RBP2.85□□□□□ -1.95
UBE2E3-212ENST00000602888 SGCAQ16586 387 aa2.85□□□□□ -1.95
UBE2E3-212ENST00000602888 TMEM183BQ1AE95 376 aa2.85□□□□□ -1.95
UBE2E3-212ENST00000602888 LCN12Q6JVE5 192 aa2.85□□□□□ -1.95
UBE2E3-212ENST00000602888 TMEM183AQ8IXX5 376 aa2.85□□□□□ -1.95
UBE2E3-212ENST00000602888 VN1R2Q8NFZ6 395 aa2.85□□□□□ -1.95
UBE2E3-212ENST00000602888 PYROXD1Q8WU10 500 aa2.85□□□□□ -1.95
UBE2E3-212ENST00000602888 MTMR9Q96QG7 549 aa2.85□□□□□ -1.95
UBE2E3-212ENST00000602888 COPS8Q99627 209 aa2.85□□□□□ -1.95
UBE2E3-212ENST00000602888 NPAS2Q99743 824 aa2.85□□□□□ -1.95
UBE2E3-212ENST00000602888 LCE3DQ9BYE3 92 aa2.85□□□□□ -1.95
UBE2E3-212ENST00000602888 DNTTIP1Q9H147 329 aa2.85□□□□□ -1.95
UBE2E3-212ENST00000602888 LY9Q9HBG7 655 aa2.85□□□□□ -1.95
UBE2E3-212ENST00000602888 MRPL47Q9HD33 250 aaKnown RBP2.85□□□□□ -1.95
UBE2E3-212ENST00000602888 LHX9Q9NQ69 397 aa2.85□□□□□ -1.95
UBE2E3-212ENST00000602888 BLOC1S6Q9UL45 172 aa2.85□□□□□ -1.95
UBE2E3-212ENST00000602888 CDH9Q9ULB4 789 aa2.85□□□□□ -1.95
UBE2E3-212ENST00000602888 PTCH1Q13635 1447 aa2.85□□□□□ -1.95
UBE2E3-212ENST00000602888 ZNFX1Q9P2E3 1918 aaKnown RBP2.84□□□□□ -1.95
UBE2E3-212ENST00000602888 IGLV4-60A0A075B6I1 120 aa2.84□□□□□ -1.95
UBE2E3-212ENST00000602888 IGLV11-55A0A075B6I3 123 aa2.84□□□□□ -1.95
UBE2E3-212ENST00000602888 C15orf38-AP3S2A0A0A6YYH1 394 aa2.84□□□□□ -1.95
UBE2E3-212ENST00000602888 SPAG7O75391 227 aa2.84□□□□□ -1.95
UBE2E3-212ENST00000602888 CLDN9O95484 217 aa2.84□□□□□ -1.95
UBE2E3-212ENST00000602888 CSF3P09919 207 aa2.84□□□□□ -1.95
UBE2E3-212ENST00000602888 GKN3PP0CG01 181 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms