RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 ARMC12Q5T9G4 340 aa3.81□□□□□ -1.8
VRK1-205ENST00000555402 TMEM107Q6UX40 140 aa3.81□□□□□ -1.8
VRK1-205ENST00000555402 PSTKQ8IV42 348 aaKnown RBP3.81□□□□□ -1.8
VRK1-205ENST00000555402 BBS5Q8N3I7 341 aa3.81□□□□□ -1.8
VRK1-205ENST00000555402 CEP112Q8N8E3 955 aa3.81□□□□□ -1.8
VRK1-205ENST00000555402 OR4F6Q8NGB9 312 aa3.81□□□□□ -1.8
VRK1-205ENST00000555402 OR9G1Q8NH87 305 aa3.81□□□□□ -1.8
VRK1-205ENST00000555402 FAM151AQ8WW52 585 aa3.81□□□□□ -1.8
VRK1-205ENST00000555402 UCN3Q969E3 161 aa3.81□□□□□ -1.8
VRK1-205ENST00000555402 ITCHQ96J02 903 aa3.81□□□□□ -1.8
VRK1-205ENST00000555402 TECTBQ96PL2 329 aa3.81□□□□□ -1.8
VRK1-205ENST00000555402 NUP58Q9BVL2 599 aa3.81□□□□□ -1.8
VRK1-205ENST00000555402 PSMC3IPQ9P2W1 217 aaPredicted RBP3.81□□□□□ -1.8
VRK1-205ENST00000555402 TMED5Q9Y3A6 229 aa3.81□□□□□ -1.8
VRK1-205ENST00000555402 NSD2O96028 1365 aa3.8□□□□□ -1.8
VRK1-205ENST00000555402 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.8□□□□□ -1.8
VRK1-205ENST00000555402 A0A1W2PPE3 182 aa3.8□□□□□ -1.8
VRK1-205ENST00000555402 UPK3AO75631 287 aa3.8□□□□□ -1.8
VRK1-205ENST00000555402 SUPT7LO94864 414 aa3.8□□□□□ -1.8
VRK1-205ENST00000555402 TMEM50AO95807 157 aa3.8□□□□□ -1.8
VRK1-205ENST00000555402 ACTL6AO96019 429 aa3.8□□□□□ -1.8
VRK1-205ENST00000555402 CST1P01037 141 aa3.8□□□□□ -1.8
VRK1-205ENST00000555402 TBPP20226 339 aa3.8□□□□□ -1.8
VRK1-205ENST00000555402 CD1BP29016 333 aa3.8□□□□□ -1.8
VRK1-205ENST00000555402 FMO3P31513 532 aa3.8□□□□□ -1.8
VRK1-205ENST00000555402 CAV2P51636 162 aa3.8□□□□□ -1.8
VRK1-205ENST00000555402 TAS2R19P59542 299 aa3.8□□□□□ -1.8
VRK1-205ENST00000555402 PRPS1P60891 318 aa3.8□□□□□ -1.8
VRK1-205ENST00000555402 KCNJ2P63252 427 aa3.8□□□□□ -1.8
VRK1-205ENST00000555402 HERPUD1Q15011 391 aa3.8□□□□□ -1.8
VRK1-205ENST00000555402 PAGE3Q5JUK9 113 aa3.8□□□□□ -1.8
VRK1-205ENST00000555402 ZNF546Q86UE3 836 aa3.8□□□□□ -1.8
VRK1-205ENST00000555402 TTC5Q8N0Z6 440 aa3.8□□□□□ -1.8
VRK1-205ENST00000555402 TM4SF19Q96DZ7 209 aa3.8□□□□□ -1.8
VRK1-205ENST00000555402 HSFY1Q96LI6 401 aa3.8□□□□□ -1.8
VRK1-205ENST00000555402 MS4A4EQ96PG1 132 aa3.8□□□□□ -1.8
VRK1-205ENST00000555402 PELOQ9BRX2 385 aaKnown RBP3.8□□□□□ -1.8
VRK1-205ENST00000555402 CENPKQ9BS16 269 aa3.8□□□□□ -1.8
VRK1-205ENST00000555402 HES7Q9BYE0 225 aa3.8□□□□□ -1.8
VRK1-205ENST00000555402 C20orf85Q9H1P6 137 aa3.8□□□□□ -1.8
VRK1-205ENST00000555402 CHMP4BQ9H444 224 aaKnown RBP3.8□□□□□ -1.8
VRK1-205ENST00000555402 THSD7BQ9C0I4 1608 aa3.8□□□□□ -1.8
VRK1-205ENST00000555402 EIF4G1Q04637 1599 aaKnown RBP3.8□□□□□ -1.8
VRK1-205ENST00000555402 FANCIQ9NVI1 1328 aa3.79□□□□□ -1.8
VRK1-205ENST00000555402 A0A1W2PPV9 198 aa3.79□□□□□ -1.8
VRK1-205ENST00000555402 EMC8O43402 210 aa3.79□□□□□ -1.8
VRK1-205ENST00000555402 RNF13O43567 381 aa3.79□□□□□ -1.8
VRK1-205ENST00000555402 GZMAP12544 262 aa3.79□□□□□ -1.8
VRK1-205ENST00000555402 KITLGP21583 273 aa3.79□□□□□ -1.8
VRK1-205ENST00000555402 CMA1P23946 247 aa3.79□□□□□ -1.8
VRK1-205ENST00000555402 ATP5C1P36542 298 aaKnown RBP3.79□□□□□ -1.8
VRK1-205ENST00000555402 ERVK-25P63136 954 aa3.79□□□□□ -1.8
VRK1-205ENST00000555402 PDIA2Q13087 525 aaKnown RBP3.79□□□□□ -1.8
VRK1-205ENST00000555402 SRSF5Q13243 272 aaKnown RBP3.79□□□□□ -1.8
VRK1-205ENST00000555402 PPIL2Q13356 520 aa3.79□□□□□ -1.8
VRK1-205ENST00000555402 GPR157Q5UAW9 335 aa3.79□□□□□ -1.8
VRK1-205ENST00000555402 NKAPP1Q8N9T2 125 aa3.79□□□□□ -1.8
VRK1-205ENST00000555402 SPATA4Q8NEY3 305 aa3.79□□□□□ -1.8
VRK1-205ENST00000555402 OR6C4Q8NGE1 309 aa3.79□□□□□ -1.8
VRK1-205ENST00000555402 LINC01006Q8NI28 216 aa3.79□□□□□ -1.8
VRK1-205ENST00000555402 RPUSD4Q96CM3 377 aaKnown RBP3.79□□□□□ -1.8
VRK1-205ENST00000555402 PHYHIPLQ96FC7 376 aa3.79□□□□□ -1.8
VRK1-205ENST00000555402 OR8B4Q96RC9 309 aa3.79□□□□□ -1.8
VRK1-205ENST00000555402 KCNA7Q96RP8 456 aa3.79□□□□□ -1.8
VRK1-205ENST00000555402 PLEKHF1Q96S99 279 aa3.79□□□□□ -1.8
VRK1-205ENST00000555402 ROGDIQ9GZN7 287 aa3.79□□□□□ -1.8
VRK1-205ENST00000555402 MFFQ9GZY8 342 aa3.79□□□□□ -1.8
VRK1-205ENST00000555402 NCOR1P1Q9H4R4 102 aa3.79□□□□□ -1.8
VRK1-205ENST00000555402 MRPL47Q9HD33 250 aaKnown RBP3.79□□□□□ -1.8
VRK1-205ENST00000555402 IL26Q9NPH9 171 aa3.79□□□□□ -1.8
VRK1-205ENST00000555402 PRR34Q9NV39 138 aa3.79□□□□□ -1.8
VRK1-205ENST00000555402 CAB39Q9Y376 341 aaPredicted RBP3.79□□□□□ -1.8
VRK1-205ENST00000555402 CSDC2Q9Y534 153 aaKnown RBP3.79□□□□□ -1.8
VRK1-205ENST00000555402 CDH10Q9Y6N8 788 aa3.79□□□□□ -1.8
VRK1-205ENST00000555402 FAM231BA6NCW3 169 aa3.78□□□□□ -1.8
VRK1-205ENST00000555402 A8MU10 97 aa3.78□□□□□ -1.8
VRK1-205ENST00000555402 A8MUA0 341 aa3.78□□□□□ -1.8
VRK1-205ENST00000555402 FAM25EA8MYX2 175 aa3.78□□□□□ -1.8
VRK1-205ENST00000555402 LSM1O15116 133 aaKnown RBP3.78□□□□□ -1.8
VRK1-205ENST00000555402 GIPP09681 153 aaPredicted RBP3.78□□□□□ -1.8
VRK1-205ENST00000555402 FUT3P21217 361 aa3.78□□□□□ -1.8
VRK1-205ENST00000555402 FDFT1P37268 417 aa3.78□□□□□ -1.8
VRK1-205ENST00000555402 PRMT2P55345 433 aa3.78□□□□□ -1.8
VRK1-205ENST00000555402 DLX1P56177 255 aa3.78□□□□□ -1.8
VRK1-205ENST00000555402 NDPQ00604 133 aa3.78□□□□□ -1.8
VRK1-205ENST00000555402 ZNF763Q0D2J5 394 aa3.78□□□□□ -1.8
VRK1-205ENST00000555402 C1orf94Q6P1W5 598 aa3.78□□□□□ -1.8
VRK1-205ENST00000555402 ZNF620Q6ZNG0 422 aa3.78□□□□□ -1.8
VRK1-205ENST00000555402 RNF165Q6ZSG1 346 aa3.78□□□□□ -1.8
VRK1-205ENST00000555402 PRSS41Q7RTY9 318 aa3.78□□□□□ -1.8
VRK1-205ENST00000555402 PNKDQ8N490 385 aa3.78□□□□□ -1.8
VRK1-205ENST00000555402 OR2G2Q8NGZ5 317 aa3.78□□□□□ -1.8
VRK1-205ENST00000555402 RAB3IL1Q8TBN0 382 aa3.78□□□□□ -1.8
VRK1-205ENST00000555402 ZNF75CPQ92670 426 aaPredicted RBP3.78□□□□□ -1.8
VRK1-205ENST00000555402 ARPC1AQ92747 370 aa3.78□□□□□ -1.8
VRK1-205ENST00000555402 TMEM101Q96IK0 257 aa3.78□□□□□ -1.8
VRK1-205ENST00000555402 SORT1Q99523 831 aa3.78□□□□□ -1.8
VRK1-205ENST00000555402 SIAEQ9HAT2 523 aa3.78□□□□□ -1.8
VRK1-205ENST00000555402 ADAP2Q9NPF8 381 aa3.78□□□□□ -1.8
VRK1-205ENST00000555402 QPCTLQ9NXS2 382 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms