RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 CMTM8Q8IZV2 173 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 OR13F1Q8NGS4 319 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 AENQ8WTP8 325 aaKnown RBP3.01□□□□□ -1.93
PTCH1-216ENST00000548379 SLC5A11Q8WWX8 675 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 TCEAL3Q969E4 200 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 SLC6A7Q99884 636 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 OMDQ99983 421 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 TIPINQ9BVW5 301 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 GNG12Q9UBI6 72 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 UXTQ9UBK9 157 aaPredicted RBP3.01□□□□□ -1.93
PTCH1-216ENST00000548379 RIMS3Q9UJD0 308 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 HPCAL4Q9UM19 191 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 USP34Q70CQ2 3546 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 MYH4Q9Y623 1939 aa3.01□□□□□ -1.93
PTCH1-216ENST00000548379 MYO5AQ9Y4I1 1855 aaKnown RBP3.01□□□□□ -1.93
PTCH1-216ENST00000548379 LCTP09848 1927 aa3□□□□□ -1.93
PTCH1-216ENST00000548379 MYH8P13535 1937 aa3□□□□□ -1.93
PTCH1-216ENST00000548379 IGLV8-61A0A075B6I0 122 aa3□□□□□ -1.93
PTCH1-216ENST00000548379 TRAV19A0A0A6YYK7 116 aa3□□□□□ -1.93
PTCH1-216ENST00000548379 ADCY5O95622 1261 aa3□□□□□ -1.93
PTCH1-216ENST00000548379 CLTAP09496 248 aa3□□□□□ -1.93
PTCH1-216ENST00000548379 OR4Q2P0C623 313 aa3□□□□□ -1.93
PTCH1-216ENST00000548379 PRG2P13727 222 aa3□□□□□ -1.93
PTCH1-216ENST00000548379 CD80P33681 288 aa3□□□□□ -1.93
PTCH1-216ENST00000548379 CHI3L1P36222 383 aaPredicted RBP3□□□□□ -1.93
PTCH1-216ENST00000548379 RIPPLY3P57055 190 aa3□□□□□ -1.93
PTCH1-216ENST00000548379 ACTR1AP61163 376 aa3□□□□□ -1.93
PTCH1-216ENST00000548379 RPL10AP62906 217 aaKnown RBP3□□□□□ -1.93
PTCH1-216ENST00000548379 NUCB2P80303 420 aa3□□□□□ -1.93
PTCH1-216ENST00000548379 MRPS11P82912 194 aaKnown RBP3□□□□□ -1.93
PTCH1-216ENST00000548379 SERTAD2Q14140 314 aa3□□□□□ -1.93
PTCH1-216ENST00000548379 XKR4Q5GH76 650 aa3□□□□□ -1.93
PTCH1-216ENST00000548379 EOGTQ5NDL2 527 aa3□□□□□ -1.93
PTCH1-216ENST00000548379 WSCD1Q658N2 575 aa3□□□□□ -1.93
PTCH1-216ENST00000548379 ALKAL1Q6UXT8 129 aa3□□□□□ -1.93
PTCH1-216ENST00000548379 CENPQQ7L2Z9 268 aaPredicted RBP3□□□□□ -1.93
PTCH1-216ENST00000548379 C17orf82Q86X59 251 aaPredicted RBP3□□□□□ -1.93
PTCH1-216ENST00000548379 GPD1LQ8N335 351 aa3□□□□□ -1.93
PTCH1-216ENST00000548379 CLDN19Q8N6F1 224 aa3□□□□□ -1.93
PTCH1-216ENST00000548379 ZNF525Q8N782 197 aa3□□□□□ -1.93
PTCH1-216ENST00000548379 OR2T33Q8NG76 320 aa3□□□□□ -1.93
PTCH1-216ENST00000548379 PNPT1Q8TCS8 783 aaKnown RBP3□□□□□ -1.93
PTCH1-216ENST00000548379 SPPL2BQ8TCT7 592 aa3□□□□□ -1.93
PTCH1-216ENST00000548379 RLN3Q8WXF3 142 aa3□□□□□ -1.93
PTCH1-216ENST00000548379 RPL3LQ92901 407 aaKnown RBP3□□□□□ -1.93
PTCH1-216ENST00000548379 SENP8Q96LD8 212 aa3□□□□□ -1.93
PTCH1-216ENST00000548379 CNOT6LQ96LI5 555 aaKnown RBP3□□□□□ -1.93
PTCH1-216ENST00000548379 TSSK1BQ9BXA7 367 aa3□□□□□ -1.93
PTCH1-216ENST00000548379 DEFB126Q9BYW3 111 aa3□□□□□ -1.93
PTCH1-216ENST00000548379 ELOVL3Q9HB03 270 aa3□□□□□ -1.93
PTCH1-216ENST00000548379 DDX19AQ9NUU7 478 aaKnown RBP3□□□□□ -1.93
PTCH1-216ENST00000548379 VNN3Q9NY84 501 aa3□□□□□ -1.93
PTCH1-216ENST00000548379 APOBEC3BQ9UH17 382 aaKnown RBP3□□□□□ -1.93
PTCH1-216ENST00000548379 ZNF221Q9UK13 617 aa3□□□□□ -1.93
PTCH1-216ENST00000548379 MRPS7Q9Y2R9 242 aaKnown RBP3□□□□□ -1.93
PTCH1-216ENST00000548379 OARD1Q9Y530 152 aa3□□□□□ -1.93
PTCH1-216ENST00000548379 REV3LO60673 3130 aa3□□□□□ -1.93
PTCH1-216ENST00000548379 CACNA1AO00555 2505 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 ZNFX1Q9P2E3 1918 aaKnown RBP2.99□□□□□ -1.93
PTCH1-216ENST00000548379 KMT2EQ8IZD2 1858 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 MICAL3Q7RTP6 2002 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 LOC100131303A0A0U1RQF7 123 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 SPAARA0A1B0GVQ0 90 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 B4DXG7 233 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 NPIPA7E9PJI5 369 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 K7EQM0 130 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 LAD1O00515 517 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 OR7A17O14581 309 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 SLC9A3R1O14745 358 aaPredicted RBP2.99□□□□□ -1.93
PTCH1-216ENST00000548379 SLC16A4O15374 487 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 PFKFB2O60825 505 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 HUS1O60921 280 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 GPX5O75715 221 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 APODP05090 189 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 STSP08842 583 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 H2BFMP0C1H6 154 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 P0C879 139 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 NPIPA8P0DM63 369 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 CXCL8P10145 99 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 RPA2P15927 270 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 ATP6V1C1P21283 382 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 UQCRC2P22695 453 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 ANXA13P27216 316 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 PBLDP30039 288 aaPredicted RBP2.99□□□□□ -1.93
PTCH1-216ENST00000548379 NMT1P30419 496 aaKnown RBP2.99□□□□□ -1.93
PTCH1-216ENST00000548379 EFNA3P52797 238 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 GBX2P52951 348 aaPredicted RBP2.99□□□□□ -1.93
PTCH1-216ENST00000548379 AP3M2P53677 418 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 RPL32P62910 135 aaKnown RBP2.99□□□□□ -1.93
PTCH1-216ENST00000548379 SPAG1Q07617 926 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 GSG1Q2KHT4 349 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 GGTA1PQ4G0N0 100 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 SPATA46Q5T0L3 261 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 MARC1Q5VT66 337 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 CD300LGQ6UXG3 332 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 APTXQ7Z2E3 356 aaKnown RBP2.99□□□□□ -1.93
PTCH1-216ENST00000548379 KIAA1328Q86T90 577 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 VASH2Q86V25 355 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 MCOLN2Q8IZK6 566 aa2.99□□□□□ -1.93
PTCH1-216ENST00000548379 ANKFN1Q8N957 763 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms