RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 LOC101059948A0A1B0GTJ6 334 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 SHISA3A0PJX4 238 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 ANKUB1A6NFN9 424 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 SLC22A31A6NKX4 558 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 H0YC42 278 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 NPIPB7O75200 414 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 DLGAP3O95886 979 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 PSMA1P25786 263 aaKnown RBP12.34□□□□□ -0.43
HCFC2-202ENST00000544223 MAGEB1P43366 347 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 PRPS1P60891 318 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 SLC3A1Q07837 685 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 SRSF6Q13247 344 aaKnown RBP12.34□□□□□ -0.43
HCFC2-202ENST00000544223 CDCP2Q5VXM1 449 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 NUP54Q7Z3B4 507 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 JAZF1Q86VZ6 243 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 RPS19BP1Q86WX3 136 aaKnown RBP12.34□□□□□ -0.43
HCFC2-202ENST00000544223 KLHL36Q8N4N3 616 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 OR8K3Q8NH51 312 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 MCFD2Q8NI22 146 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 ASB15Q8WXK1 588 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 EMC6Q9BV81 110 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 ASPNQ9BXN1 380 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 TSPAN10Q9H1Z9 355 aaPredicted RBP12.34□□□□□ -0.43
HCFC2-202ENST00000544223 PPIL3Q9H2H8 161 aaKnown RBP12.34□□□□□ -0.43
HCFC2-202ENST00000544223 EVA1AQ9H8M9 152 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 WDR76Q9H967 626 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 TXNL4BQ9NX01 149 aaKnown RBP12.34□□□□□ -0.43
HCFC2-202ENST00000544223 MED29Q9NX70 200 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 KLHDC2Q9Y2U9 406 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 A8MVM7 634 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 ZNF814B7Z6K7 855 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 IMPDH2P12268 514 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 BMP4P12644 408 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 CPEP16870 476 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 TGM1P22735 817 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 RFC3P40938 356 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 DNASE1L1P49184 302 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 CENPAP49450 140 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 ATP1A4Q13733 1029 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 ACKR1Q16570 336 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 DGUOKQ16854 277 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 ARL9Q6T311 187 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 PRSS33Q8NF86 280 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 ORAI1Q96D31 301 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 SPRY4Q9C004 299 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 NUAK2Q9H093 628 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 PROK2Q9HC23 129 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 P4HTMQ9NXG6 502 aa12.34□□□□□ -0.43
HCFC2-202ENST00000544223 SF3B6Q9Y3B4 125 aaKnown RBP12.34□□□□□ -0.43
HCFC2-202ENST00000544223 CTDSP2O14595 271 aa12.33□□□□□ -0.44
HCFC2-202ENST00000544223 RAMP1O60894 148 aa12.33□□□□□ -0.44
HCFC2-202ENST00000544223 CDRT1O95170 752 aa12.33□□□□□ -0.44
HCFC2-202ENST00000544223 ZNF41P51814 821 aaPredicted RBP12.33□□□□□ -0.44
HCFC2-202ENST00000544223 RAB15P59190 212 aa12.33□□□□□ -0.44
HCFC2-202ENST00000544223 CHAF1BQ13112 559 aa12.33□□□□□ -0.44
HCFC2-202ENST00000544223 KRR1Q13601 381 aaKnown RBP12.33□□□□□ -0.44
HCFC2-202ENST00000544223 TOMM20Q15388 145 aa12.33□□□□□ -0.44
HCFC2-202ENST00000544223 MEP1BQ16820 701 aa12.33□□□□□ -0.44
HCFC2-202ENST00000544223 PLPPR5Q32ZL2 321 aa12.33□□□□□ -0.44
HCFC2-202ENST00000544223 FAM69AQ5T7M9 428 aa12.33□□□□□ -0.44
HCFC2-202ENST00000544223 SPATC1Q76KD6 591 aa12.33□□□□□ -0.44
HCFC2-202ENST00000544223 PSD4Q8NDX1 1056 aa12.33□□□□□ -0.44
HCFC2-202ENST00000544223 TXNDC15Q96J42 360 aa12.33□□□□□ -0.44
HCFC2-202ENST00000544223 C5orf34Q96MH7 638 aa12.33□□□□□ -0.44
HCFC2-202ENST00000544223 STUB1Q9UNE7 303 aa12.33□□□□□ -0.44
HCFC2-202ENST00000544223 BSNQ9UPA5 3926 aa12.33□□□□□ -0.44
HCFC2-202ENST00000544223 A0A1B0GTH9 108 aa12.33□□□□□ -0.44
HCFC2-202ENST00000544223 MAGEB3O15480 346 aa12.33□□□□□ -0.44
HCFC2-202ENST00000544223 MPZL1O95297 269 aa12.33□□□□□ -0.44
HCFC2-202ENST00000544223 SDHAP31040 664 aa12.33□□□□□ -0.44
HCFC2-202ENST00000544223 SDC2P34741 201 aa12.33□□□□□ -0.44
HCFC2-202ENST00000544223 FMODQ06828 376 aa12.33□□□□□ -0.44
HCFC2-202ENST00000544223 PON3Q15166 354 aa12.33□□□□□ -0.44
HCFC2-202ENST00000544223 USP43Q70EL4 1123 aa12.33□□□□□ -0.44
HCFC2-202ENST00000544223 UFD1Q92890 307 aa12.33□□□□□ -0.44
HCFC2-202ENST00000544223 ALG12Q9BV10 488 aa12.33□□□□□ -0.44
HCFC2-202ENST00000544223 FKRPQ9H9S5 495 aa12.33□□□□□ -0.44
HCFC2-202ENST00000544223 ACOXLQ9NUZ1 547 aa12.33□□□□□ -0.44
HCFC2-202ENST00000544223 ZNF229Q9UJW7 825 aa12.33□□□□□ -0.44
HCFC2-202ENST00000544223 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.32□□□□□ -0.44
HCFC2-202ENST00000544223 LCN1P31025 176 aa12.32□□□□□ -0.44
HCFC2-202ENST00000544223 TMED10P49755 219 aaKnown RBP12.32□□□□□ -0.44
HCFC2-202ENST00000544223 SSR4P51571 173 aa12.32□□□□□ -0.44
HCFC2-202ENST00000544223 DCTN2Q13561 401 aaKnown RBP12.32□□□□□ -0.44
HCFC2-202ENST00000544223 GALEQ14376 348 aa12.32□□□□□ -0.44
HCFC2-202ENST00000544223 LINC01590Q5TEZ4 76 aa12.32□□□□□ -0.44
HCFC2-202ENST00000544223 STPG1Q5TH74 334 aa12.32□□□□□ -0.44
HCFC2-202ENST00000544223 LRRC69Q6ZNQ3 347 aa12.32□□□□□ -0.44
HCFC2-202ENST00000544223 OR2M3Q8NG83 312 aa12.32□□□□□ -0.44
HCFC2-202ENST00000544223 HSD17B8Q92506 261 aa12.32□□□□□ -0.44
HCFC2-202ENST00000544223 MS4A18H0YCH9 400 aa12.32□□□□□ -0.44
HCFC2-202ENST00000544223 PLPP3O14495 311 aa12.32□□□□□ -0.44
HCFC2-202ENST00000544223 ARPC3O15145 178 aa12.32□□□□□ -0.44
HCFC2-202ENST00000544223 AHSA1O95433 338 aa12.32□□□□□ -0.44
HCFC2-202ENST00000544223 MYBPHQ13203 477 aa12.32□□□□□ -0.44
HCFC2-202ENST00000544223 MOGQ16653 247 aa12.32□□□□□ -0.44
HCFC2-202ENST00000544223 ODF4Q2M2E3 257 aa12.32□□□□□ -0.44
HCFC2-202ENST00000544223 MS4A18Q3C1V0 323 aa12.32□□□□□ -0.44
HCFC2-202ENST00000544223 RNLSQ5VYX0 342 aa12.32□□□□□ -0.44
HCFC2-202ENST00000544223 SPINK14Q6IE38 97 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms