RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 OR13C9Q8NGT0 318 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 C19orf53Q9UNZ5 99 aaPredicted RBP15□□□□□ -0.01
PCDHA3-201ENST00000522353 MICAL3Q7RTP6 2002 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 CCDC187A0A096LP49 1063 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 H7C1C5 153 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 GAPDHSO14556 408 aaPredicted RBP15□□□□□ -0.01
PCDHA3-201ENST00000522353 IFNA10P01566 189 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 CDK4P11802 303 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 RPL34P49207 117 aaKnown RBP15□□□□□ -0.01
PCDHA3-201ENST00000522353 LCN6P62502 163 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 EMX1Q04741 257 aaPredicted RBP15□□□□□ -0.01
PCDHA3-201ENST00000522353 ZMAT1Q5H9K5 638 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 AGAP6Q5VW22 663 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 TMEM71Q6P5X7 295 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 CAMKMTQ7Z624 323 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 LRRC28Q86X40 367 aaPredicted RBP15□□□□□ -0.01
PCDHA3-201ENST00000522353 MORN4Q8NDC4 146 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 OR1N1Q8NGS0 311 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 S100PBPQ96BU1 408 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 FAM117AQ9C073 453 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 MED16Q9Y2X0 877 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 PRAMEF27A3QJZ7 478 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 LMO7DNF2Z398 122 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 GLI3P10071 1580 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 ST6GAL1P15907 406 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 BDKRB2P30411 391 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 GPR3P46089 330 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 ETFBKMTQ8IXQ9 262 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 YARS2Q9Y2Z4 477 aaKnown RBP15□□□□□ -0.01
PCDHA3-201ENST00000522353 GFYI3L273 518 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 CRHBPP24387 322 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 IL3RAP26951 378 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 HYAL1Q12794 435 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 Q6ZNB5 142 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 B3GNT8Q7Z7M8 397 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 DCUN1D4Q92564 292 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 RASD1Q9Y272 281 aa15□□□□□ -0.01
PCDHA3-201ENST00000522353 PRAMEF4O60810 478 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 TSPAN15O95858 294 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 ALDH3B2P48448 385 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 TAS2R19P59542 299 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 CPEB2Q7Z5Q1 589 aaKnown RBP14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 C17orf50Q8WW18 174 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 C11orf40Q8WZ69 217 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 MUL1Q969V5 352 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 ZNF583Q96ND8 569 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 TMEM59Q9BXS4 323 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 C12orf49Q9H741 205 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 ASIC5Q9NY37 505 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 LRFN1Q9P244 771 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 MYH7BA7E2Y1 1941 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 TRPM3Q9HCF6 1732 aaPredicted RBP14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 P2RX6O15547 441 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 ACVR1Q04771 509 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 OR14K1Q8NGZ2 314 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 GGHQ92820 318 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 PDFQ9HBH1 243 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 NXPH2O95156 264 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 SLC1A3P43003 542 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 LTBQ06643 244 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 OR8B8Q15620 311 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 LEXMQ3ZCV2 418 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 SERPINA12Q8IW75 414 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 KCNG3Q8TAE7 436 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 UTP4Q969X6 686 aaKnown RBP14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 OR6C65A6NJZ3 312 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 CEBPZOSA8MTT3 80 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 ARPC1BO15143 372 aaKnown RBP14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 GASTP01350 101 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 FPR3P25089 353 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 ACTBL2Q562R1 376 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 METAP1DQ6UB28 335 aaPredicted RBP14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 WBP2Q969T9 261 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 NMNAT3Q96T66 252 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 PRRX2Q99811 253 aa14.99□□□□□ -0.01
PCDHA3-201ENST00000522353 MYH4Q9Y623 1939 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 KIR2DL3P43628 341 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 USF2Q15853 346 aaPredicted RBP14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 NXNL2Q5VZ03 156 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 NCCRP1Q6ZVX7 275 aaPredicted RBP14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 TAAR8Q969N4 342 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 CHRNA9Q9UGM1 479 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 MYH15Q9Y2K3 1946 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 CXorf51AA0A1B0GTR3 108 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 B4GAT1O43505 415 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 LILRB5O75023 590 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 FZD7O75084 574 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 UBCP0CG48 685 aaKnown RBP14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 ETV6P41212 452 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 CCR2P41597 374 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 EIF3IQ13347 325 aaKnown RBP14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 CLVS2Q5SYC1 327 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 GIMAP5Q96F15 307 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 TOR1AO14656 332 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 DPM1O60762 260 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 IFNA17P01571 189 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 PTGER4P35408 488 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 RAB5BP61020 215 aa14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 GRB2P62993 217 aaKnown RBP14.98□□□□□ -0.01
PCDHA3-201ENST00000522353 ILKQ13418 452 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms