RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 PLPP6Q8IY26 295 aa12.38□□□□□ -0.43
SNED1-205ENST00000405547 FRMD1Q8N878 549 aa12.38□□□□□ -0.43
SNED1-205ENST00000405547 FYTTD1Q96QD9 318 aaKnown RBP12.38□□□□□ -0.43
SNED1-205ENST00000405547 OCEL1Q9H607 264 aa12.38□□□□□ -0.43
SNED1-205ENST00000405547 TCRBV5S2A0A599 114 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 H0YGG7 62 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 SEC14L5O43304 696 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 CD14P08571 375 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 MMP11P24347 488 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 ETV5P41161 510 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 LTB4RQ15722 352 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 DHRS4L2Q6PKH6 230 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 VASH1Q7L8A9 365 aaPredicted RBP12.37□□□□□ -0.43
SNED1-205ENST00000405547 PDXPQ96GD0 296 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 ZNF318Q5VUA4 2279 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 IRF2P14316 349 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 SERPINA2P20848 420 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 DSC1Q08554 894 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 SCARB1Q8WTV0 552 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 SPATA6Q9NWH7 488 aaPredicted RBP12.37□□□□□ -0.43
SNED1-205ENST00000405547 ABCA3Q99758 1704 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 HIDE1A8MVS5 230 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 SMLR1H3BR10 107 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 EPHA1P21709 976 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 TMEM64Q6YI46 380 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 KCNG3Q8TAE7 436 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 TAAR2Q9P1P5 351 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 CST5P28325 142 aaPredicted RBP12.37□□□□□ -0.43
SNED1-205ENST00000405547 SRPXP78539 464 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 BAK1Q16611 211 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 ANKLE1Q8NAG6 615 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 TMEM43Q9BTV4 400 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 PRMT8Q9NR22 394 aaPredicted RBP12.37□□□□□ -0.43
SNED1-205ENST00000405547 STARD5Q9NSY2 213 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 VSX1Q9NZR4 365 aaPredicted RBP12.37□□□□□ -0.43
SNED1-205ENST00000405547 KLKB1P03952 638 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 CEBPBP17676 345 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 MAKP20794 623 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 DPY19L4Q7Z388 723 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 CDCA3Q99618 268 aaPredicted RBP12.37□□□□□ -0.43
SNED1-205ENST00000405547 NMNAT2Q9BZQ4 307 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 ZNF286AQ9HBT8 521 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 CREBZFQ9NS37 354 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 PPT2Q9UMR5 302 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 PIAS3Q9Y6X2 628 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 LRIT2A6NDA9 550 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 MSTNO14793 375 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 GALR3O60755 368 aaPredicted RBP12.37□□□□□ -0.43
SNED1-205ENST00000405547 CLDN2P57739 230 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 SLC9A3R2Q15599 337 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 RPE65Q16518 533 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 TMEM200AQ86VY9 491 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 RIMKLAQ8IXN7 391 aa12.37□□□□□ -0.43
SNED1-205ENST00000405547 HSBP1L1C9JCN9 74 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 D6RAR5 112 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 LILRB5O75023 590 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 HOXA9P31269 272 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 RAB38P57729 211 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 TMEM255BQ8WV15 326 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 ZNF681Q96N22 645 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 SMIM3Q9BZL3 60 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 SMCO4Q9NRQ5 59 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 GFOD1Q9NXC2 390 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 RPS10-NUDT3A0A1W2PQS6 291 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 RPS10P46783 165 aaKnown RBP12.36□□□□□ -0.43
SNED1-205ENST00000405547 POU3F1Q03052 451 aaPredicted RBP12.36□□□□□ -0.43
SNED1-205ENST00000405547 SLC48A1Q6P1K1 146 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 MISPQ8IVT2 679 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 OR4D6Q8NGJ1 314 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 MARC2Q969Z3 335 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 TCTN2Q96GX1 697 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 CTRCQ99895 268 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 WIF1Q9Y5W5 379 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 ANKRD36A6QL64 1941 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 GIPP09681 153 aaPredicted RBP12.36□□□□□ -0.43
SNED1-205ENST00000405547 GDPD3Q7L5L3 318 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 MRPL41Q8IXM3 137 aaKnown RBP12.36□□□□□ -0.43
SNED1-205ENST00000405547 SCN8AQ9UQD0 1980 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 OR6C65A6NJZ3 312 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 PAPLNO95428 1278 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 B3GLCTQ6Y288 498 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 WDR88Q6ZMY6 472 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 SLC22A24Q8N4F4 322 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 BBS1Q8NFJ9 593 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 OR5L1Q8NGL2 311 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 SDHAF2Q9NX18 166 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 RAB22AQ9UL26 194 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 DICER1Q9UPY3 1922 aaKnown RBP12.36□□□□□ -0.43
SNED1-205ENST00000405547 SERINC4A6NH21 518 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 SOCS7O14512 581 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 KLK8O60259 260 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 ACTL6BO94805 426 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 THBS1P07996 1170 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 ACSM1Q08AH1 577 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 KCNIP4Q6PIL6 250 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 PRICKLE2Q7Z3G6 844 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 NLGN4XQ8N0W4 816 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 RSC1A1Q92681 617 aa12.36□□□□□ -0.43
SNED1-205ENST00000405547 TCEAL2Q9H3H9 227 aaPredicted RBP12.36□□□□□ -0.43
SNED1-205ENST00000405547 SLC25A37Q9NYZ2 338 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms