RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 F10P00742 488 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 IGHA1P01876 353 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 CDK4P11802 303 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 SDHAP31040 664 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 HCCSP53701 268 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 LCN6P62502 163 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 MLLT11Q13015 90 aaPredicted RBP13.7□□□□□ -0.22
HIF3A-218ENST00000600383 ATP1A4Q13733 1029 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 PON3Q15166 354 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 OR7A5Q15622 319 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 PLPPR5Q32ZL2 321 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 ANKDD1AQ495B1 522 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 FAM122BQ7Z309 247 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 KLHL36Q8N4N3 616 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 OR6K6Q8NGW6 343 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 SPRYD4Q8WW59 207 aaPredicted RBP13.7□□□□□ -0.22
HIF3A-218ENST00000600383 ZNRF4Q8WWF5 429 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 SMPDL3BQ92485 455 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 TM9SF4Q92544 642 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 GNRHR2Q96P88 292 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 RACGAP1Q9H0H5 632 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 SRA1Q9HD15 236 aaKnown RBP13.7□□□□□ -0.22
HIF3A-218ENST00000600383 IL17BQ9UHF5 180 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 ZNF346Q9UL40 294 aaKnown RBP13.7□□□□□ -0.22
HIF3A-218ENST00000600383 RPH3AQ9Y2J0 694 aaPredicted RBP13.7□□□□□ -0.22
HIF3A-218ENST00000600383 PCDHGB6Q9Y5F9 930 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 DMXL1Q9Y485 3027 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 J3QRE1 110 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 EFNA2O43921 213 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 SBK2P0C263 348 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 PSMA1P25786 263 aaKnown RBP13.7□□□□□ -0.22
HIF3A-218ENST00000600383 GABREP78334 506 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 SNTA1Q13424 505 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 GLYR1Q49A26 553 aaPredicted RBP13.7□□□□□ -0.22
HIF3A-218ENST00000600383 PHC2Q8IXK0 858 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 ZNF417Q8TAU3 575 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 DDIT4LQ96D03 193 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 THOC3Q96J01 351 aaKnown RBP13.7□□□□□ -0.22
HIF3A-218ENST00000600383 MRGPRX4Q96LA9 322 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 TSPAN32Q96QS1 320 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 ZNF587Q96SQ5 575 aaPredicted RBP13.7□□□□□ -0.22
HIF3A-218ENST00000600383 ARHGAP9Q9BRR9 750 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 ZNF649Q9BS31 505 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 COL25A1Q9BXS0 654 aaPredicted RBP13.7□□□□□ -0.22
HIF3A-218ENST00000600383 NDEL1Q9GZM8 345 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 DCSTAMPQ9H295 470 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 ISG20L2Q9H9L3 353 aaKnown RBP13.7□□□□□ -0.22
HIF3A-218ENST00000600383 ADGRL4Q9HBW9 690 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 CPNE5Q9HCH3 593 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 MED12Q93074 2177 aa13.7□□□□□ -0.22
HIF3A-218ENST00000600383 IGLV3-32A0A0A0MS00 114 aa13.69□□□□□ -0.22
HIF3A-218ENST00000600383 FAM47E-STBD1D6RA91 191 aa13.69□□□□□ -0.22
HIF3A-218ENST00000600383 LRRTM2O43300 516 aa13.69□□□□□ -0.22
HIF3A-218ENST00000600383 SERPINA7P05543 415 aa13.69□□□□□ -0.22
HIF3A-218ENST00000600383 SPI1P17947 270 aa13.69□□□□□ -0.22
HIF3A-218ENST00000600383 GTF2E2P29084 291 aaKnown RBP13.69□□□□□ -0.22
HIF3A-218ENST00000600383 NAA10P41227 235 aaPredicted RBP13.69□□□□□ -0.22
HIF3A-218ENST00000600383 LGALS3BPQ08380 585 aa13.69□□□□□ -0.22
HIF3A-218ENST00000600383 SGCBQ16585 318 aa13.69□□□□□ -0.22
HIF3A-218ENST00000600383 ACER2Q5QJU3 275 aa13.69□□□□□ -0.22
HIF3A-218ENST00000600383 ARMC4Q5T2S8 1044 aa13.69□□□□□ -0.22
HIF3A-218ENST00000600383 PLCZ1Q86YW0 608 aa13.69□□□□□ -0.22
HIF3A-218ENST00000600383 POC1BQ8TC44 478 aa13.69□□□□□ -0.22
HIF3A-218ENST00000600383 DDOQ99489 341 aa13.69□□□□□ -0.22
HIF3A-218ENST00000600383 ALG8Q9BVK2 526 aa13.69□□□□□ -0.22
HIF3A-218ENST00000600383 TTTY10Q9BZA0 68 aa13.69□□□□□ -0.22
HIF3A-218ENST00000600383 INIPQ9NRY2 104 aa13.69□□□□□ -0.22
HIF3A-218ENST00000600383 SLC6A5Q9Y345 797 aa13.69□□□□□ -0.22
HIF3A-218ENST00000600383 MUC6Q6W4X9 2439 aa13.69□□□□□ -0.22
HIF3A-218ENST00000600383 ARHGEF9O43307 516 aa13.69□□□□□ -0.22
HIF3A-218ENST00000600383 GPX5O75715 221 aa13.69□□□□□ -0.22
HIF3A-218ENST00000600383 LALBAP00709 142 aa13.69□□□□□ -0.22
HIF3A-218ENST00000600383 PYCR1P32322 319 aa13.69□□□□□ -0.22
HIF3A-218ENST00000600383 TMED1Q13445 227 aa13.69□□□□□ -0.22
HIF3A-218ENST00000600383 TIMM50Q3ZCQ8 353 aa13.69□□□□□ -0.22
HIF3A-218ENST00000600383 C5orf46Q6UWT4 87 aa13.69□□□□□ -0.22
HIF3A-218ENST00000600383 KLBQ86Z14 1044 aa13.69□□□□□ -0.22
HIF3A-218ENST00000600383 PAQR8Q8TEZ7 354 aa13.69□□□□□ -0.22
HIF3A-218ENST00000600383 C1GALT1C1Q96EU7 318 aa13.69□□□□□ -0.22
HIF3A-218ENST00000600383 ANGPTL4Q9BY76 406 aa13.69□□□□□ -0.22
HIF3A-218ENST00000600383 SERINC1Q9NRX5 453 aa13.69□□□□□ -0.22
HIF3A-218ENST00000600383 STMN3Q9NZ72 180 aa13.69□□□□□ -0.22
HIF3A-218ENST00000600383 PLPP3O14495 311 aa13.68□□□□□ -0.22
HIF3A-218ENST00000600383 APEHP13798 732 aaKnown RBP13.68□□□□□ -0.22
HIF3A-218ENST00000600383 ROR2Q01974 943 aaKnown RBP13.68□□□□□ -0.22
HIF3A-218ENST00000600383 OC90Q02509 493 aaPredicted RBP13.68□□□□□ -0.22
HIF3A-218ENST00000600383 KRR1Q13601 381 aaKnown RBP13.68□□□□□ -0.22
HIF3A-218ENST00000600383 MESTQ5EB52 335 aa13.68□□□□□ -0.22
HIF3A-218ENST00000600383 C19orf48Q6RUI8 117 aa13.68□□□□□ -0.22
HIF3A-218ENST00000600383 ZNF322Q6U7Q0 402 aaPredicted RBP13.68□□□□□ -0.22
HIF3A-218ENST00000600383 LYPD4Q6UWN0 246 aa13.68□□□□□ -0.22
HIF3A-218ENST00000600383 TMPRSS11AQ6ZMR5 421 aa13.68□□□□□ -0.22
HIF3A-218ENST00000600383 OR1J4Q8NGS1 313 aa13.68□□□□□ -0.22
HIF3A-218ENST00000600383 PROK2Q9HC23 129 aa13.68□□□□□ -0.22
HIF3A-218ENST00000600383 HAO2Q9NYQ3 351 aa13.68□□□□□ -0.22
HIF3A-218ENST00000600383 ZNF292O60281 2723 aa13.67□□□□□ -0.22
HIF3A-218ENST00000600383 A0A1W2PQL4 384 aaPredicted RBP13.67□□□□□ -0.22
HIF3A-218ENST00000600383 XKRYO14609 159 aa13.67□□□□□ -0.22
HIF3A-218ENST00000600383 ZNF208O43345 1280 aa13.67□□□□□ -0.22
HIF3A-218ENST00000600383 CLPXO76031 633 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms