RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 ZNF560Q96MR9 790 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 GSDMAQ96QA5 445 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 XPO6Q96QU8 1125 aaKnown RBP1.02□□□□□ -2.25
SMG1-212ENST00000566328 TSPAN18Q96SJ8 248 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 OMDQ99983 421 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 TUBGCP2Q9BSJ2 902 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 NAA11Q9BSU3 229 aaPredicted RBP1.02□□□□□ -2.25
SMG1-212ENST00000566328 WRAP53Q9BUR4 548 aaKnown RBP1.02□□□□□ -2.25
SMG1-212ENST00000566328 EDEM2Q9BV94 578 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 NUP58Q9BVL2 599 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 OR10A4Q9H209 315 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 ABCG8Q9H221 673 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 TMEM245Q9H330 911 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 FBXO44Q9H4M3 255 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 CYP3A43Q9HB55 503 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 DMAP1Q9NPF5 467 aaPredicted RBP1.02□□□□□ -2.25
SMG1-212ENST00000566328 MRPL40Q9NQ50 206 aaKnown RBP1.02□□□□□ -2.25
SMG1-212ENST00000566328 TRPV5Q9NQA5 729 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 PIGVQ9NUD9 493 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 ETNK2Q9NVF9 386 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 FBXL12Q9NXK8 326 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 UXTQ9UBK9 157 aaPredicted RBP1.02□□□□□ -2.25
SMG1-212ENST00000566328 PCSK1NQ9UHG2 260 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 MED13Q9UHV7 2174 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 TEKT2Q9UIF3 430 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 GGA2Q9UJY4 613 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 MMP17Q9ULZ9 603 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 PLA2G4CQ9UP65 541 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 ERVW-1Q9UQF0 538 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 ERVK-19Q9WJR5 959 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 ITM2BQ9Y287 266 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 COQ4Q9Y3A0 265 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 HYOU1Q9Y4L1 999 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 OR51B4Q9Y5P0 310 aa1.02□□□□□ -2.25
SMG1-212ENST00000566328 ZFYVE26Q68DK2 2539 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 IGF2RP11717 2491 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 APC2O95996 2303 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 SCN3AQ9NY46 2000 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 DOCK4Q8N1I0 1966 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 CHD5Q8TDI0 1954 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 SCN8AQ9UQD0 1980 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 ANKRD36A6QL64 1941 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 TSC2P49815 1807 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 PATJQ8NI35 1801 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 TACC2O95359 2948 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 IGLV2-18A0A075B6J9 118 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 SYCE3A1L190 88 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 NKX2-6A6NCS4 301 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 C11orf98E9PRG8 122 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 TLR4O00206 839 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 DFFAO00273 331 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 KPNA3O00505 521 aaPredicted RBP1.01□□□□□ -2.25
SMG1-212ENST00000566328 SLC9A3R1O14745 358 aaPredicted RBP1.01□□□□□ -2.25
SMG1-212ENST00000566328 PSMA7O14818 248 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 XPO1O14980 1071 aaKnown RBP1.01□□□□□ -2.25
SMG1-212ENST00000566328 CHUKO15111 745 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 TIMM44O43615 452 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 BUB1O43683 1085 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 CACNG3O60359 315 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 ZMPSTE24O75844 475 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 RBBP9O75884 186 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 PDE5AO76074 875 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 SUPT7LO94864 414 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 IGLV3-25P01717 112 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 IGLV3-27P01718 113 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 UGT2B4P06133 528 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 SERPINF2P08697 491 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 PIRTP0C851 137 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 GIMD1P0DJR0 217 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 UCHL3P15374 230 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 HTR1EP28566 365 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 OR1E1P30953 314 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 HOXA6P31267 233 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 CA5AP35218 305 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 SSR1P43307 286 aaKnown RBP1.01□□□□□ -2.25
SMG1-212ENST00000566328 SULT1E1P49888 294 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 AP3M2P53677 418 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 ATXN3P54252 364 aaPredicted RBP1.01□□□□□ -2.25
SMG1-212ENST00000566328 MAXP61244 160 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 UBE2HP62256 183 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 SNRPFP62306 86 aaKnown RBP1.01□□□□□ -2.25
SMG1-212ENST00000566328 ARF5P84085 180 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 PUDPQ08623 228 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 SLC10A7Q0GE19 358 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 CCDC173Q0VFZ6 552 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 BST2Q10589 180 aaKnown RBP1.01□□□□□ -2.25
SMG1-212ENST00000566328 SMARCB1Q12824 385 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 DPYSL3Q14195 570 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 GGTLC2Q14390 218 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 TOMM20Q15388 145 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 SYCP1Q15431 976 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 CST6Q15828 149 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 IGFBP7Q16270 282 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 CDKN3Q16667 212 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 TPD52L1Q16890 204 aaPredicted RBP1.01□□□□□ -2.25
SMG1-212ENST00000566328 EXOC3L4Q17RC7 722 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 DEFB133Q30KQ1 61 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 HNRNPA1L2Q32P51 320 aaKnown RBP1.01□□□□□ -2.25
SMG1-212ENST00000566328 MPPE1Q53F39 396 aa1.01□□□□□ -2.25
SMG1-212ENST00000566328 KRBOX4Q5JUW0 171 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms