RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 NEUROD4Q9HD90 331 aa6.14□□□□□ -1.43
CHD6-203ENST00000373233 ENY2Q9NPA8 101 aa6.14□□□□□ -1.43
CHD6-203ENST00000373233 UBE2J1Q9Y385 318 aaPredicted RBP6.14□□□□□ -1.43
CHD6-203ENST00000373233 ARHGAP33O14559 1287 aa6.14□□□□□ -1.43
CHD6-203ENST00000373233 SLC6A11P48066 632 aa6.14□□□□□ -1.43
CHD6-203ENST00000373233 CLCN7P51798 805 aa6.14□□□□□ -1.43
CHD6-203ENST00000373233 RAB1AP62820 205 aa6.14□□□□□ -1.43
CHD6-203ENST00000373233 SLC5A12Q1EHB4 618 aa6.14□□□□□ -1.43
CHD6-203ENST00000373233 EOGTQ5NDL2 527 aa6.14□□□□□ -1.43
CHD6-203ENST00000373233 OR2T33Q8NG76 320 aa6.14□□□□□ -1.43
CHD6-203ENST00000373233 CD200R1Q8TD46 325 aa6.14□□□□□ -1.43
CHD6-203ENST00000373233 PTP4A1Q93096 173 aa6.14□□□□□ -1.43
CHD6-203ENST00000373233 OR8D2Q9GZM6 311 aa6.14□□□□□ -1.43
CHD6-203ENST00000373233 POLMQ9NP87 494 aaPredicted RBP6.14□□□□□ -1.43
CHD6-203ENST00000373233 CNOT2Q9NZN8 540 aaKnown RBP6.14□□□□□ -1.43
CHD6-203ENST00000373233 CFAP20Q9Y6A4 193 aaKnown RBP6.14□□□□□ -1.43
CHD6-203ENST00000373233 A0A1W2PP55 124 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 SIAH2O43255 324 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 HOXB1P14653 301 aaPredicted RBP6.13□□□□□ -1.43
CHD6-203ENST00000373233 GRPRP30550 384 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 MTNR1AP48039 350 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 CDK5Q00535 292 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 AWAT2Q6E213 333 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 LIPIQ6XZB0 460 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 THOC6Q86W42 341 aaKnown RBP6.13□□□□□ -1.43
CHD6-203ENST00000373233 COMMD1Q8N668 190 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 ZNF563Q8TA94 476 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 LCN9Q8WX39 176 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 OR51I2Q9H344 312 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 PIAS3Q9Y6X2 628 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 TRBV2A0A0J9YWF9 115 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 TCRBP04435 133 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 SMN1Q16637 294 aaKnown RBP6.13□□□□□ -1.43
CHD6-203ENST00000373233 EXOSC6Q5RKV6 272 aaKnown RBP6.13□□□□□ -1.43
CHD6-203ENST00000373233 IL20RBQ6UXL0 311 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 MFSD4AQ8N468 514 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 CLDN22Q8N7P3 220 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 OR52N1Q8NH53 320 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 RAB7BQ96AH8 199 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 KCNH6Q9H252 994 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 UBQLN3Q9H347 655 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 ISYNA1Q9NPH2 558 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 H3BNC9 293 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 TBX19O60806 448 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 AKR7A3O95154 331 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 HOXB2P14652 356 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 APEX1P27695 318 aaKnown RBP6.13□□□□□ -1.43
CHD6-203ENST00000373233 NCBP2P52298 156 aaKnown RBP eCLIP6.13□□□□□ -1.434e-7■□□□□ 8.5
CHD6-203ENST00000373233 OR10A3P58181 314 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 HNRNPKP61978 463 aaKnown RBP eCLIP6.13□□□□□ -1.43
CHD6-203ENST00000373233 TPRA1Q86W33 373 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 NPAS3Q8IXF0 933 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 RSRP1Q9BUV0 290 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 P2RX2Q9UBL9 471 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 TRAV18A0A075B6X5 111 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 ANKRD61A6NGH8 418 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 POP7O75817 140 aaKnown RBP6.13□□□□□ -1.43
CHD6-203ENST00000373233 IGHA2P01877 340 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 ITGA5P08648 1049 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 LIPCP11150 499 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 C6orf136Q5SQH8 315 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 VN1R2Q8NFZ6 395 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 OR1J1Q8NGS3 322 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 OR2AJ1Q8NGZ0 328 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 MRPL38Q96DV4 380 aaKnown RBP6.13□□□□□ -1.43
CHD6-203ENST00000373233 CABLES2Q9BTV7 478 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 ENKD1Q9H0I2 346 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 SERTAD4Q9NUC0 356 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 DHDHQ9UQ10 334 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 ZNF726A6NNF4 738 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 GNRHRP30968 328 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 HOXA9P31269 272 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 ARHGAP19Q14CB8 494 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 MLIPQ5VWP3 458 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 GGNBP1Q5YKI7 109 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 SAXO2Q658L1 398 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 CBARPQ8N350 705 aaPredicted RBP6.13□□□□□ -1.43
CHD6-203ENST00000373233 FBXO15Q8NCQ5 510 aaPredicted RBP6.13□□□□□ -1.43
CHD6-203ENST00000373233 ACVR1CQ8NER5 493 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 PCED1AQ9H1Q7 454 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 VPS29Q9UBQ0 182 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 INTS1Q8N201 2190 aaKnown RBP6.13□□□□□ -1.43
CHD6-203ENST00000373233 LOC105371267A0A1B0GV96 52 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 CCSO14618 274 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 ACAA1P09110 424 aaPredicted RBP6.13□□□□□ -1.43
CHD6-203ENST00000373233 ZNF250P15622 560 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 IRS1P35568 1242 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 RPS13P62277 151 aaKnown RBP6.13□□□□□ -1.43
CHD6-203ENST00000373233 SLBPQ14493 270 aaKnown RBP eCLIP6.13□□□□□ -1.43
CHD6-203ENST00000373233 CEBPEQ15744 281 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 ETFDHQ16134 617 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 RPE65Q16518 533 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 PRAMEF14Q5SWL7 426 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 LYSMD1Q96S90 227 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 CD180Q99467 661 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 RAB11FIP5Q9BXF6 653 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 CD244Q9BZW8 370 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 SLC32A1Q9H598 525 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 CDCP1Q9H5V8 836 aa6.13□□□□□ -1.43
CHD6-203ENST00000373233 THSD1Q9NS62 852 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms