RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 FOXF1Q12946 379 aa18.09■□□□□ 0.49
RTN1-202ENST00000342503 EMC4Q5J8M3 183 aa18.09■□□□□ 0.49
RTN1-202ENST00000342503 C22orf42Q6IC83 251 aa18.09■□□□□ 0.49
RTN1-202ENST00000342503 POMGNT2Q8NAT1 580 aa18.09■□□□□ 0.49
RTN1-202ENST00000342503 OR5J2Q8NH18 312 aa18.09■□□□□ 0.49
RTN1-202ENST00000342503 CNN2Q99439 309 aaKnown RBP18.09■□□□□ 0.49
RTN1-202ENST00000342503 CDC6Q99741 560 aa18.09■□□□□ 0.49
RTN1-202ENST00000342503 RERGLQ9H628 205 aa18.09■□□□□ 0.49
RTN1-202ENST00000342503 HMG20AQ9NP66 347 aa18.09■□□□□ 0.49
RTN1-202ENST00000342503 ZNF346Q9UL40 294 aaKnown RBP18.09■□□□□ 0.49
RTN1-202ENST00000342503 EML6Q6ZMW3 1958 aa18.08■□□□□ 0.49
RTN1-202ENST00000342503 A0A1W2PNU3 283 aaPredicted RBP18.08■□□□□ 0.48
RTN1-202ENST00000342503 C9orf172C9J069 976 aa18.08■□□□□ 0.48
RTN1-202ENST00000342503 C11orf98E9PRG8 122 aa18.08■□□□□ 0.48
RTN1-202ENST00000342503 MT-CO3P00414 261 aa18.08■□□□□ 0.48
RTN1-202ENST00000342503 BMP4P12644 408 aa18.08■□□□□ 0.48
RTN1-202ENST00000342503 CELP19835 753 aa18.08■□□□□ 0.48
RTN1-202ENST00000342503 GRPRP30550 384 aa18.08■□□□□ 0.48
RTN1-202ENST00000342503 SOX6P35712 828 aa18.08■□□□□ 0.48
RTN1-202ENST00000342503 NAA10P41227 235 aaPredicted RBP18.08■□□□□ 0.48
RTN1-202ENST00000342503 APOBEC1P41238 236 aaKnown RBP18.08■□□□□ 0.48
RTN1-202ENST00000342503 SLC25A1P53007 311 aa18.08■□□□□ 0.48
RTN1-202ENST00000342503 BDH1Q02338 343 aa18.08■□□□□ 0.48
RTN1-202ENST00000342503 KRR1Q13601 381 aaKnown RBP18.08■□□□□ 0.48
RTN1-202ENST00000342503 SGCBQ16585 318 aa18.08■□□□□ 0.48
RTN1-202ENST00000342503 CRTC2Q53ET0 693 aaPredicted RBP18.08■□□□□ 0.48
RTN1-202ENST00000342503 MESTQ5EB52 335 aa18.08■□□□□ 0.48
RTN1-202ENST00000342503 C5orf46Q6UWT4 87 aa18.08■□□□□ 0.48
RTN1-202ENST00000342503 SSX6Q7RTT6 188 aa18.08■□□□□ 0.48
RTN1-202ENST00000342503 PPP1R32Q7Z5V6 425 aa18.08■□□□□ 0.48
RTN1-202ENST00000342503 EXD3Q8N9H8 876 aa18.08■□□□□ 0.48
RTN1-202ENST00000342503 SUMF1Q8NBK3 374 aa18.08■□□□□ 0.48
RTN1-202ENST00000342503 SPRY4Q9C004 299 aa18.08■□□□□ 0.48
RTN1-202ENST00000342503 WDR12Q9GZL7 423 aaKnown RBP18.08■□□□□ 0.48
RTN1-202ENST00000342503 RPRD1BQ9NQG5 326 aaKnown RBP18.08■□□□□ 0.48
RTN1-202ENST00000342503 TCFL5Q9UL49 500 aa18.08■□□□□ 0.48
RTN1-202ENST00000342503 A0A1W2PQ72 361 aa18.07■□□□□ 0.48
RTN1-202ENST00000342503 MASP2O00187 686 aa18.07■□□□□ 0.48
RTN1-202ENST00000342503 TP53I11O14683 189 aa18.07■□□□□ 0.48
RTN1-202ENST00000342503 GLCEO94923 617 aa18.07■□□□□ 0.48
RTN1-202ENST00000342503 MT-ND5P03915 603 aa18.07■□□□□ 0.48
RTN1-202ENST00000342503 RAB40ALP0C0E4 278 aa18.07■□□□□ 0.48
RTN1-202ENST00000342503 OTX2P32243 289 aa18.07■□□□□ 0.48
RTN1-202ENST00000342503 PYCR1P32322 319 aa18.07■□□□□ 0.48
RTN1-202ENST00000342503 IL10RAQ13651 578 aa18.07■□□□□ 0.48
RTN1-202ENST00000342503 INPP5JQ15735 1006 aaPredicted RBP18.07■□□□□ 0.48
RTN1-202ENST00000342503 GPR139Q6DWJ6 353 aa18.07■□□□□ 0.48
RTN1-202ENST00000342503 VASNQ6EMK4 673 aa18.07■□□□□ 0.48
RTN1-202ENST00000342503 IL20RBQ6UXL0 311 aa18.07■□□□□ 0.48
RTN1-202ENST00000342503 SLC35F2Q8IXU6 374 aa18.07■□□□□ 0.48
RTN1-202ENST00000342503 MFSD4AQ8N468 514 aa18.07■□□□□ 0.48
RTN1-202ENST00000342503 RFLNBQ8N5W9 214 aa18.07■□□□□ 0.48
RTN1-202ENST00000342503 TMED9Q9BVK6 235 aa18.07■□□□□ 0.48
RTN1-202ENST00000342503 C6orf62Q9GZU0 229 aaPredicted RBP18.07■□□□□ 0.48
RTN1-202ENST00000342503 CDCP1Q9H5V8 836 aa18.07■□□□□ 0.48
RTN1-202ENST00000342503 NOX1Q9Y5S8 564 aa18.07■□□□□ 0.48
RTN1-202ENST00000342503 SIRT4Q9Y6E7 314 aaPredicted RBP18.07■□□□□ 0.48
RTN1-202ENST00000342503 CHCHD2Q9Y6H1 151 aaPredicted RBP18.07■□□□□ 0.48
RTN1-202ENST00000342503 FAM171A2A8MVW0 826 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 SHISA8B8ZZ34 492 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 ETV2O00321 342 aaPredicted RBP18.06■□□□□ 0.48
RTN1-202ENST00000342503 OR2T1O43869 369 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 DXOO77932 396 aaKnown RBP18.06■□□□□ 0.48
RTN1-202ENST00000342503 OR2T7P0C7T2 308 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 ZNF41P51814 821 aaPredicted RBP18.06■□□□□ 0.48
RTN1-202ENST00000342503 LINC01590Q5TEZ4 76 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 C16orf87Q6PH81 154 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 CD200R1LQ6Q8B3 271 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 OPN5Q6U736 354 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 OR2M3Q8NG83 312 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 OR6K6Q8NGW6 343 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 OR2T27Q8NH04 317 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 C4orf36Q96KX1 117 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 TSSK2Q96PF2 358 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 INIPQ9NRY2 104 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 SNTG1Q9NSN8 517 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 ZMIZ1Q9ULJ6 1067 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 FARSAQ9Y285 508 aaKnown RBP18.06■□□□□ 0.48
RTN1-202ENST00000342503 WDFY3Q8IZQ1 3526 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 CCDC187A0A096LP49 1063 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 TRDV1A0A1B0GX56 115 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 FTCDNL1E5RQL4 147 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 H7C1C5 153 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 J3QLW9 94 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 RNF13O43567 381 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 SELENOFO60613 162 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 CDRT1O95170 752 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 ZNF19P17023 458 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 IL11P20809 199 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 LCN6P62502 163 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 INAQ16352 499 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.06■□□□□ 0.48
RTN1-202ENST00000342503 PLPPR5Q32ZL2 321 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 SLC6A19Q695T7 634 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 OR6S1Q8NH40 331 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 ASB15Q8WXK1 588 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 ALG12Q9BV10 488 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 TTTY10Q9BZA0 68 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 SIAEQ9HAT2 523 aa18.06■□□□□ 0.48
RTN1-202ENST00000342503 CPNE5Q9HCH3 593 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms