RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 ZNF229Q9UJW7 825 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 ING1Q9UK53 422 aaPredicted RBP9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 FLNCQ14315 2725 aa9.76□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 SPTAN1Q13813 2472 aaKnown RBP9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 HTR3EA5X5Y0 456 aa9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 LRRN3E7EW58 273 aa9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 C11orf98E9PRG8 122 aa9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 C16orf97H3BN30 126 aa9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 RNF13O43567 381 aa9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 FZD7O75084 574 aa9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 KRT33AO76009 404 aa9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 OR7A10O76100 309 aa9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 CNOT4O95628 575 aaKnown RBP9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 IGF2P01344 180 aa9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 ADORA3P0DMS8 318 aa9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 SAGP10523 405 aaPredicted RBP9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 IFI30P13284 250 aa9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 IGFBP2P18065 325 aa9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 AHCYP23526 432 aa9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 IL32P24001 234 aa9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 PCYT1AP49585 367 aa9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 P2RY4P51582 365 aa9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 VLDLRP98155 873 aa9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 POU3F1Q03052 451 aaPredicted RBP9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 TRAP1Q12931 704 aaKnown RBP9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 SNTB1Q13884 538 aaKnown RBP9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 FLOT2Q14254 428 aa9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 FAM98BQ52LJ0 330 aaKnown RBP9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 NIPAL3Q6P499 406 aa9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 Q6ZT83 130 aa9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 ABHD12BQ7Z5M8 362 aaPredicted RBP9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 ZDHHC21Q8IVQ6 265 aa9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 ACOT11Q8WXI4 607 aaPredicted RBP9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 ZNF347Q96SE7 839 aa9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 SEPHS2Q99611 448 aa9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 PIP5K1AQ99755 562 aa9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 MAGIXQ9H6Y5 334 aa9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 MCCC2Q9HCC0 563 aa9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 MEPEQ9NQ76 525 aaPredicted RBP9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 NDUFAF4Q9P032 175 aa9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 SEC14L4Q9UDX3 406 aa9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 KCNN3Q9UGI6 736 aa9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 PRSS50Q9UI38 385 aa9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 PTPN13Q12923 2485 aa9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 PKDREJQ9NTG1 2253 aa9.75□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 SH3D21A4FU49 640 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 OR6C65A6NJZ3 312 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 EBAG9O00559 213 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 FFAR1O14842 300 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 CASKO14936 926 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 PIP5K1CO60331 668 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 SERPINI2O75830 405 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 DIRAS1O95057 198 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 PRSS23O95084 383 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 GADD45GO95257 159 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 ADAP00813 363 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 IGHV3-9P01782 118 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 SEMG1P04279 462 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 PPP3CBP16298 524 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 UGT2B10P36537 528 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 CLDN17P56750 224 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 CHRNB3Q05901 458 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 LTBQ06643 244 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 FAM27E3Q08E93 113 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 TAF11Q15544 211 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 FBXW9Q5XUX1 488 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 FBXW10Q5XX13 1052 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 CREB3L2Q70SY1 520 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 SLC46A3Q7Z3Q1 461 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 CXorf67Q86X51 503 aaPredicted RBP9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 RNF113BQ8IZP6 322 aaKnown RBP9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 KDM8Q8N371 416 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 POMGNT2Q8NAT1 580 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 PIK3C3Q8NEB9 887 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 STEAP2Q8NFT2 490 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 KISS1RQ969F8 398 aaPredicted RBP9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 C7orf34Q96L11 122 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 ZNF385AQ96PM9 386 aaKnown RBP9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 MED18Q9BUE0 208 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 NDEL1Q9GZM8 345 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 SLCO5A1Q9H2Y9 848 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 NMNAT1Q9HAN9 279 aaPredicted RBP9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 IL1RAPQ9NPH3 570 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 ASB6Q9NWX5 421 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 RCE1Q9Y256 329 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 TMEM5Q9Y2B1 443 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 GPR52Q9Y2T5 361 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 TESMINQ9Y4I5 508 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 NOX1Q9Y5S8 564 aa9.74□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 A0A1W2PRQ8 180 aa9.73□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 TCRBV5S2A0A599 114 aa9.73□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 AQP12BA6NM10 295 aa9.73□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 MCIDASD6RGH6 385 aa9.73□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 ZNF587BE7ETH6 402 aa9.73□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 BLOC1S5-TXNDC5H3BN57 136 aa9.73□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 PLPP3O14495 311 aa9.73□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 GSC2O15499 205 aa9.73□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 SLC43A1O75387 559 aa9.73□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 ASAH2BP0C7U1 165 aa9.73□□□□□ -0.85
CSPG4P1Y-201ENST00000306641 HOXB6P17509 224 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms