RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Zfp119bQ8K0G9 543 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Slc16a14Q8K1C7 512 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Ubqln1Q8R317 582 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Slc25a36Q922G0 311 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Msantd3Q9CR78 275 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Fam3bQ9D309 235 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Pmepa1Q9D7R2 260 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Slc9a3r2Q9JHL1 337 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 DmdP11531 3678 aa15.14■□□□□ 0.01
Shh-201ENSMUST00000002708 Olfr1095A3KPP7 308 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 P03976 113 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Eef1a1P10126 462 aaKnown RBP15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 LhcgrP30730 700 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 P2rx1P51576 399 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Btg1P62325 171 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Hes5P70120 167 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Shisa3Q3UPR0 238 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Bbs1Q3V3N7 593 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Znf354aQ61751 572 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Gm5346Q7M766 736 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Dsg1cQ7TSF0 911 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Hs6st2Q80UW0 612 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Pou6f2Q8BJI4 691 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Ces2eQ8BK48 559 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Fem1abQ8C0T1 654 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Cmtm4Q8CJ61 208 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Nfatc4Q8K120 901 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Tmcc3Q8R310 477 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Zmynd11Q8R5C8 602 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Mrps23Q8VE22 177 aaKnown RBP15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Raf1Q99N57 648 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Acss1Q99NB1 682 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Cops7aQ9CZ04 275 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Pfn4Q9D6I3 129 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Stk25Q9Z2W1 426 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Smpd5D6MZJ6 483 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Gp6P0C191 313 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Cfl1P18760 166 aaKnown RBP15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 FstP47931 344 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 PitpnaP53810 271 aaKnown RBP15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Fgf17P63075 216 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Gm10750Q3V0I0 133 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Tnfaip3Q60769 775 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 HlxQ61670 476 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Taf6Q62311 678 aaKnown RBP15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Tha1Q6XPS7 400 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Aldh3b1Q80VQ0 468 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Glrx5Q80Y14 152 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Atg4dQ8BGV9 474 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Ccm2lQ8VCC6 481 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Ackr4Q924I3 350 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Sucnr1Q99MT6 317 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Ndufa5Q9CPP6 116 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 Slc25a27Q9D6D0 322 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 UqcrbQ9D855 111 aa15.13■□□□□ 0.01
Shh-201ENSMUST00000002708 AgmatA2AS89 358 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Olfr1164A2AVT5 326 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Spata6lB2RV46 347 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Olfr190K7N5T5 307 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Dok2O70469 412 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 UgdhO70475 493 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Uba1yP31254 1058 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Nrsn2Q5HZK2 202 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Camk2dQ6PHZ2 499 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Zbtb26Q8C8S0 451 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Plcz1Q8K4D7 647 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Prdm5Q9CXE0 599 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Prelid3bQ9CYY7 195 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Rab3bQ9CZT8 219 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Mpc2Q9D023 127 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Lingo1Q9D1T0 614 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Dmac2Q9D7K5 258 aaKnown RBP15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Lat2Q9JHL0 203 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 PtgfrnQ9WV91 879 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Cdh20Q9Z0M3 801 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 HnrnpdlQ9Z130 301 aaKnown RBP15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Mocs2Q9Z223 189 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Gm13090A2A899 111 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Mesp2O08574 370 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Papss2O88428 621 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Creg1O88668 220 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Best1O88870 551 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 NelfeP19426 375 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Tbxa2rP30987 341 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Foxd3Q61060 465 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Bcap29Q61334 240 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Lrrn1Q61809 716 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Prss50Q8BLH5 439 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Mterf4Q8BVN4 346 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 TigarQ8BZA9 269 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 GatcQ8CBY0 155 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Olfr781Q8VFZ8 311 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 RgccQ9DBX1 137 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Zfp873A0A1B0GT64 667 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Gm8906L7N2A2 181 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Prl4a1O35256 227 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 DxoO70348 397 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 ApelaP0DMC4 54 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 GhrhrP32082 423 aa15.12■□□□□ 0.01
Shh-201ENSMUST00000002708 Cdh4P39038 913 aa15.12■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 50 ms