Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Gm25239-201ENSMUST00000174915 86 ntBASIC31.95■■■□□ 2.71
Raf1Q99N57 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Raf1Q99N57 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Raf1Q99N57 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
Raf1Q99N57 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Raf1Q99N57 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Raf1Q99N57 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Raf1Q99N57 Psd-208ENSMUST00000224556 2034 ntBASIC28.42■■■□□ 2.14
Raf1Q99N57 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Raf1Q99N57 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Raf1Q99N57 Gm24109-201ENSMUST00000175489 103 ntBASIC27.85■■■□□ 2.05
Raf1Q99N57 Gm15042-201ENSMUST00000120212 883 ntBASIC27.66■■■□□ 2.02
Raf1Q99N57 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
Raf1Q99N57 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Raf1Q99N57 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Raf1Q99N57 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Raf1Q99N57 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Raf1Q99N57 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Raf1Q99N57 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.03■■□□□ 1.92
Raf1Q99N57 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Raf1Q99N57 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Raf1Q99N57 Gm15045-201ENSMUST00000117359 883 ntBASIC26.92■■□□□ 1.9
Raf1Q99N57 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Raf1Q99N57 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Raf1Q99N57 Gm23366-201ENSMUST00000175022 89 ntBASIC26.7■■□□□ 1.86
Raf1Q99N57 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Raf1Q99N57 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Raf1Q99N57 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Raf1Q99N57 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Raf1Q99N57 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Raf1Q99N57 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Raf1Q99N57 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Raf1Q99N57 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
Raf1Q99N57 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.22■■□□□ 1.79
Raf1Q99N57 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Raf1Q99N57 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Raf1Q99N57 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Raf1Q99N57 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.12■■□□□ 1.77
Raf1Q99N57 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
Raf1Q99N57 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.07■■□□□ 1.76
Raf1Q99N57 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26■■□□□ 1.75
Raf1Q99N57 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Raf1Q99N57 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
Raf1Q99N57 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.88■■□□□ 1.73
Raf1Q99N57 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Raf1Q99N57 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Raf1Q99N57 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.81■■□□□ 1.72
Raf1Q99N57 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Raf1Q99N57 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.78■■□□□ 1.72
Raf1Q99N57 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Raf1Q99N57 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Raf1Q99N57 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.71■■□□□ 1.71
Raf1Q99N57 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Raf1Q99N57 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Raf1Q99N57 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Raf1Q99N57 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Raf1Q99N57 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Raf1Q99N57 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Raf1Q99N57 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.47■■□□□ 1.67
Raf1Q99N57 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.41■■□□□ 1.66
Raf1Q99N57 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.4■■□□□ 1.66
Raf1Q99N57 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Raf1Q99N57 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Raf1Q99N57 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Raf1Q99N57 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Raf1Q99N57 Gm25238-201ENSMUST00000174914 89 ntBASIC25.27■■□□□ 1.64
Raf1Q99N57 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Raf1Q99N57 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Raf1Q99N57 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
Raf1Q99N57 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Raf1Q99N57 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Raf1Q99N57 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Raf1Q99N57 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Raf1Q99N57 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.02■■□□□ 1.6
Raf1Q99N57 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Raf1Q99N57 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.88■■□□□ 1.57
Raf1Q99N57 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Raf1Q99N57 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
Raf1Q99N57 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Raf1Q99N57 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
Raf1Q99N57 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Raf1Q99N57 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Raf1Q99N57 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
Raf1Q99N57 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Raf1Q99N57 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Raf1Q99N57 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
Raf1Q99N57 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Raf1Q99N57 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Raf1Q99N57 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
Raf1Q99N57 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.53■■□□□ 1.52
Raf1Q99N57 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.52■■□□□ 1.52
Raf1Q99N57 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.5■■□□□ 1.51
Raf1Q99N57 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Raf1Q99N57 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
Raf1Q99N57 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Raf1Q99N57 Gm25262-201ENSMUST00000174934 133 ntBASIC24.45■■□□□ 1.5
Raf1Q99N57 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Raf1Q99N57 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Raf1Q99N57 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Raf1Q99N57 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms