RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 RNASE6Q93091 150 aaKnown RBP11.19□□□□□ -0.62
SHMT2-214ENST00000554604 WNT2BQ93097 391 aa11.19□□□□□ -0.62
SHMT2-214ENST00000554604 NMD3Q96D46 503 aaKnown RBP11.19□□□□□ -0.62
SHMT2-214ENST00000554604 PRRC1Q96M27 445 aa11.19□□□□□ -0.62
SHMT2-214ENST00000554604 ZFP3Q96NJ6 502 aa11.19□□□□□ -0.62
SHMT2-214ENST00000554604 ARHGDIGQ99819 225 aa11.19□□□□□ -0.62
SHMT2-214ENST00000554604 NIPSNAP1Q9BPW8 284 aa11.19□□□□□ -0.62
SHMT2-214ENST00000554604 PIGQQ9BRB3 760 aa11.19□□□□□ -0.62
SHMT2-214ENST00000554604 G6PC3Q9BUM1 346 aa11.19□□□□□ -0.62
SHMT2-214ENST00000554604 RTN4RQ9BZR6 473 aa11.19□□□□□ -0.62
SHMT2-214ENST00000554604 NMNAT1Q9HAN9 279 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-214ENST00000554604 FOXD3Q9UJU5 478 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-214ENST00000554604 A4GNTQ9UNA3 340 aa11.19□□□□□ -0.62
SHMT2-214ENST00000554604 KCNE3Q9Y6H6 103 aa11.19□□□□□ -0.62
SHMT2-214ENST00000554604 HEATR5AQ86XA9 2040 aa11.19□□□□□ -0.62
SHMT2-214ENST00000554604 MAP1AP78559 2803 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-214ENST00000554604 F8P00451 2351 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 A0A1W2PRQ8 180 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 ALG1L2C9J202 215 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 H3BML4 177 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 LINC01387J3KSC0 135 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 SCDO00767 359 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 SEC14L2O76054 403 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 SOX30O94993 753 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 IL18BPO95998 194 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 NGFRP08138 427 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 TBXA2RP21731 343 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 DCKP27707 260 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 EPHA2P29317 976 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 LCN1P31025 176 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 PRKAR1BP31321 381 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 B3GALT5-AS1P59052 145 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 SLC35A2P78381 396 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 HPCAP84074 193 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 CHRNEQ04844 493 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 SNTB1Q13884 538 aaKnown RBP11.18□□□□□ -0.62
SHMT2-214ENST00000554604 DGCR6Q14129 220 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.18□□□□□ -0.62
SHMT2-214ENST00000554604 XAF1Q6GPH4 301 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 APOOLQ6UXV4 268 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 KIF18BQ86Y91 864 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 CLVS1Q8IUQ0 354 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-214ENST00000554604 ENTHD1Q8IYW4 607 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 GCNT2Q8N0V5 402 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 GATSQ8NAP1 163 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 AQP11Q8NBQ7 271 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 BPIFB6Q8NFQ5 453 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 OR13F1Q8NGS4 319 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 OR4C3Q8NH37 302 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 IPCEF1Q8WWN9 437 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-214ENST00000554604 INTS12Q96CB8 462 aaKnown RBP11.18□□□□□ -0.62
SHMT2-214ENST00000554604 C1GALT1C1Q96EU7 318 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 STACQ99469 402 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 DOK1Q99704 481 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 DGCR6LQ9BY27 220 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 PIGUQ9H490 435 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 UBQLN4Q9NRR5 601 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 DUSP22Q9NRW4 184 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 PLCXD1Q9NUJ7 323 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 RHCGQ9UBD6 479 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 CLCF1Q9UBD9 225 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 IFT52Q9Y366 437 aa11.18□□□□□ -0.62
SHMT2-214ENST00000554604 IGLV3-32A0A0A0MS00 114 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 TRBV4-1A0A0J9YWV2 114 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 SH3PXD2BA1X283 911 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 OR2M5A3KFT3 312 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 M0R3H8 397 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 SEC14L5O43304 696 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 WBP4O75554 376 aaKnown RBP11.17□□□□□ -0.62
SHMT2-214ENST00000554604 UGT2B17O75795 530 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 RCBTB2O95199 551 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 AK1P00568 194 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 GASTP01350 101 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 FMO3P31513 532 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 CRISP1P54107 249 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 FOXF2Q12947 444 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 NEDD8Q15843 81 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 FBXL19-AS1Q494R0 122 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 GLYR1Q49A26 553 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-214ENST00000554604 ZNF311Q5JNZ3 666 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 FGD3Q5JSP0 725 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 CCNJQ5T5M9 372 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 AP1ARQ63HQ0 302 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 GTF2IRD2BQ6EKJ0 949 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 POMZP3Q6PJE2 187 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 KLHL17Q6TDP4 642 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 PLXDC2Q6UX71 529 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 FRRS1Q6ZNA5 592 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 OLIG3Q7RTU3 272 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 ADGRE4PQ86SQ3 457 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 CDH24Q86UP0 819 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 GTF2IRD2Q86UP8 949 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 COMTD1Q86VU5 262 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 RBM45Q8IUH3 476 aaKnown RBP11.17□□□□□ -0.62
SHMT2-214ENST00000554604 ERI1Q8IV48 349 aaKnown RBP11.17□□□□□ -0.62
SHMT2-214ENST00000554604 ZNF527Q8NB42 609 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 OR5M1Q8NGP8 315 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 APH1BQ8WW43 257 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 SMPDL3BQ92485 455 aa11.17□□□□□ -0.62
SHMT2-214ENST00000554604 PMM1Q92871 262 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms