RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 HAO2Q9NYQ3 351 aa18.61■□□□□ 0.57
TMEM260-203ENST00000539559 TBC1D29Q9UFV1 150 aa18.61■□□□□ 0.57
TMEM260-203ENST00000539559 OR5V1Q9UGF6 321 aa18.61■□□□□ 0.57
TMEM260-203ENST00000539559 DAPP1Q9UN19 280 aa18.61■□□□□ 0.57
TMEM260-203ENST00000539559 C19orf53Q9UNZ5 99 aaPredicted RBP18.61■□□□□ 0.57
TMEM260-203ENST00000539559 TRANK1O15050 2925 aa18.6■□□□□ 0.57
TMEM260-203ENST00000539559 A0A1B0GUH1 482 aa18.6■□□□□ 0.57
TMEM260-203ENST00000539559 ZFPL1O95159 310 aa18.6■□□□□ 0.57
TMEM260-203ENST00000539559 IFNGP01579 166 aa18.6■□□□□ 0.57
TMEM260-203ENST00000539559 LPLP06858 475 aa18.6■□□□□ 0.57
TMEM260-203ENST00000539559 RPL4P36578 427 aaKnown RBP18.6■□□□□ 0.57
TMEM260-203ENST00000539559 FHL5Q5TD97 284 aa18.6■□□□□ 0.57
TMEM260-203ENST00000539559 VITQ6UXI7 678 aa18.6■□□□□ 0.57
TMEM260-203ENST00000539559 CCL4L1Q8NHW4 92 aa18.6■□□□□ 0.57
TMEM260-203ENST00000539559 SIPA1Q96FS4 1042 aa18.6■□□□□ 0.57
TMEM260-203ENST00000539559 RADILQ96JH8 1075 aa18.6■□□□□ 0.57
TMEM260-203ENST00000539559 NKX3-1Q99801 234 aaPredicted RBP18.6■□□□□ 0.57
TMEM260-203ENST00000539559 RAB11FIP5Q9BXF6 653 aa18.6■□□□□ 0.57
TMEM260-203ENST00000539559 TAS2R10Q9NYW0 307 aa18.6■□□□□ 0.57
TMEM260-203ENST00000539559 A0A0B4J2E0 115 aa18.6■□□□□ 0.57
TMEM260-203ENST00000539559 A0A1B0GX12 115 aa18.6■□□□□ 0.57
TMEM260-203ENST00000539559 GABARAPH6UMI1 98 aa18.6■□□□□ 0.57
TMEM260-203ENST00000539559 OR2T7P0C7T2 308 aa18.6■□□□□ 0.57
TMEM260-203ENST00000539559 NFYAP23511 347 aaPredicted RBP18.6■□□□□ 0.57
TMEM260-203ENST00000539559 STX4Q12846 297 aa18.6■□□□□ 0.57
TMEM260-203ENST00000539559 FAM53BQ14153 422 aa18.6■□□□□ 0.57
TMEM260-203ENST00000539559 ODF4Q2M2E3 257 aa18.6■□□□□ 0.57
TMEM260-203ENST00000539559 FAM69AQ5T7M9 428 aa18.6■□□□□ 0.57
TMEM260-203ENST00000539559 RPL22L1Q6P5R6 122 aaKnown RBP18.6■□□□□ 0.57
TMEM260-203ENST00000539559 DGAT2L6Q6ZPD8 337 aa18.6■□□□□ 0.57
TMEM260-203ENST00000539559 STPG2Q8N412 459 aa18.6■□□□□ 0.57
TMEM260-203ENST00000539559 OR2T27Q8NH04 317 aa18.6■□□□□ 0.57
TMEM260-203ENST00000539559 TSSK2Q96PF2 358 aa18.6■□□□□ 0.57
TMEM260-203ENST00000539559 GINS4Q9BRT9 223 aa18.6■□□□□ 0.57
TMEM260-203ENST00000539559 CHRNA9Q9UGM1 479 aa18.6■□□□□ 0.57
TMEM260-203ENST00000539559 MSRAQ9UJ68 235 aa18.6■□□□□ 0.57
TMEM260-203ENST00000539559 FOXJ3Q9UPW0 622 aa18.6■□□□□ 0.57
TMEM260-203ENST00000539559 RANBP2P49792 3224 aaKnown RBP18.6■□□□□ 0.57
TMEM260-203ENST00000539559 MEIS3P1A6NDR6 274 aa18.59■□□□□ 0.57
TMEM260-203ENST00000539559 PPP2CBP62714 309 aa18.59■□□□□ 0.57
TMEM260-203ENST00000539559 PPP2CAP67775 309 aa18.59■□□□□ 0.57
TMEM260-203ENST00000539559 ARHGAP11AQ6P4F7 1023 aa18.59■□□□□ 0.57
TMEM260-203ENST00000539559 THEM6Q8WUY1 208 aa18.59■□□□□ 0.57
TMEM260-203ENST00000539559 RAB7BQ96AH8 199 aa18.59■□□□□ 0.57
TMEM260-203ENST00000539559 PPA2Q9H2U2 334 aa18.59■□□□□ 0.57
TMEM260-203ENST00000539559 OR6C68A6NDL8 312 aa18.59■□□□□ 0.57
TMEM260-203ENST00000539559 EPOPA6NHQ4 379 aa18.59■□□□□ 0.57
TMEM260-203ENST00000539559 MCRIP1C9JLW8 97 aa18.59■□□□□ 0.57
TMEM260-203ENST00000539559 PYCARD-AS1I3L0S3 204 aa18.59■□□□□ 0.57
TMEM260-203ENST00000539559 SLC31A1O15431 190 aa18.59■□□□□ 0.57
TMEM260-203ENST00000539559 SUSD5O60279 629 aa18.59■□□□□ 0.57
TMEM260-203ENST00000539559 PPM1BO75688 479 aa18.59■□□□□ 0.57
TMEM260-203ENST00000539559 TSPAN9O75954 239 aa18.59■□□□□ 0.57
TMEM260-203ENST00000539559 NMBP08949 121 aa18.59■□□□□ 0.57
TMEM260-203ENST00000539559 SLC35G6P0C7Q6 338 aa18.59■□□□□ 0.57
TMEM260-203ENST00000539559 RUNX3Q13761 415 aa18.59■□□□□ 0.57
TMEM260-203ENST00000539559 KCNAB1Q14722 419 aa18.59■□□□□ 0.57
TMEM260-203ENST00000539559 CST6Q15828 149 aa18.59■□□□□ 0.57
TMEM260-203ENST00000539559 NNATQ16517 81 aa18.59■□□□□ 0.57
TMEM260-203ENST00000539559 ZNF511Q8NB15 262 aa18.59■□□□□ 0.57
TMEM260-203ENST00000539559 OR8K3Q8NH51 312 aa18.59■□□□□ 0.57
TMEM260-203ENST00000539559 OR10G6Q8NH81 332 aa18.59■□□□□ 0.57
TMEM260-203ENST00000539559 ST8SIA4Q92187 359 aa18.59■□□□□ 0.57
TMEM260-203ENST00000539559 B3GNT4Q9C0J1 378 aa18.59■□□□□ 0.57
TMEM260-203ENST00000539559 FGF22Q9HCT0 170 aa18.59■□□□□ 0.57
TMEM260-203ENST00000539559 CA5BQ9Y2D0 317 aa18.59■□□□□ 0.57
TMEM260-203ENST00000539559 MUC22E2RYF6 1773 aaPredicted RBP18.59■□□□□ 0.57
TMEM260-203ENST00000539559 FXYD6-FXYD2A0A087WZ82 144 aa18.58■□□□□ 0.57
TMEM260-203ENST00000539559 MFSD2BA6NFX1 497 aa18.58■□□□□ 0.57
TMEM260-203ENST00000539559 AIPO00170 330 aa18.58■□□□□ 0.57
TMEM260-203ENST00000539559 VSIG10L2P0DP72 767 aa18.58■□□□□ 0.57
TMEM260-203ENST00000539559 NUP62P37198 522 aaPredicted RBP18.58■□□□□ 0.57
TMEM260-203ENST00000539559 TSFMP43897 325 aaKnown RBP18.58■□□□□ 0.57
TMEM260-203ENST00000539559 PWWP2BQ6NUJ5 590 aa18.58■□□□□ 0.57
TMEM260-203ENST00000539559 YAF2Q8IY57 180 aa18.58■□□□□ 0.57
TMEM260-203ENST00000539559 FXYD6Q9H0Q3 95 aa18.58■□□□□ 0.57
TMEM260-203ENST00000539559 ICAM5Q9UMF0 924 aa18.58■□□□□ 0.57
TMEM260-203ENST00000539559 EML5Q05BV3 1969 aa18.58■□□□□ 0.57
TMEM260-203ENST00000539559 ATG2AQ2TAZ0 1938 aa18.58■□□□□ 0.57
TMEM260-203ENST00000539559 TICRRQ7Z2Z1 1910 aa18.58■□□□□ 0.57
TMEM260-203ENST00000539559 KNL1Q8NG31 2342 aa18.58■□□□□ 0.57
TMEM260-203ENST00000539559 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.58■□□□□ 0.56
TMEM260-203ENST00000539559 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.58■□□□□ 0.56
TMEM260-203ENST00000539559 ZNF879B4DU55 563 aa18.58■□□□□ 0.56
TMEM260-203ENST00000539559 B3GALT2O43825 422 aa18.58■□□□□ 0.56
TMEM260-203ENST00000539559 PVRP15151 417 aa18.58■□□□□ 0.56
TMEM260-203ENST00000539559 NAGAP17050 411 aa18.58■□□□□ 0.56
TMEM260-203ENST00000539559 ACTA2P62736 377 aa18.58■□□□□ 0.56
TMEM260-203ENST00000539559 ERVK-25P63136 954 aa18.58■□□□□ 0.56
TMEM260-203ENST00000539559 ACTG2P63267 376 aa18.58■□□□□ 0.56
TMEM260-203ENST00000539559 POU4F2Q12837 409 aa18.58■□□□□ 0.56
TMEM260-203ENST00000539559 HLXQ14774 488 aaPredicted RBP18.58■□□□□ 0.56
TMEM260-203ENST00000539559 PON3Q15166 354 aa18.58■□□□□ 0.56
TMEM260-203ENST00000539559 OTPQ5XKR4 325 aa18.58■□□□□ 0.56
TMEM260-203ENST00000539559 BAIAP2L2Q6UXY1 529 aa18.58■□□□□ 0.56
TMEM260-203ENST00000539559 CFAP77Q6ZQR2 320 aa18.58■□□□□ 0.56
TMEM260-203ENST00000539559 FAM71CQ8NEG0 241 aa18.58■□□□□ 0.56
TMEM260-203ENST00000539559 OR4D10Q8NGI6 311 aa18.58■□□□□ 0.56
TMEM260-203ENST00000539559 SLC2A12Q8TD20 617 aa18.58■□□□□ 0.56
TMEM260-203ENST00000539559 TIMM29Q9BSF4 260 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms